BAC Information

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BAC

Clone NameB6Ng01-039L04
Chromosome4 (Build37)
Map Location 86,806,608 - 86,806,949
singlet/doubletsinglet
Overlap geneSlc24a2
Upstream geneAdamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l
Downstream geneMllt3, BC057079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039L04.bB6Ng01-039L04.g
ACCDH866893DH866894
length1,220342
definitionDH866893|Mus musculus domesticus DNA, BAC clone: B6Ng01-039L04, 5' end.DH866894|Mus musculus domesticus DNA, BAC clone: B6Ng01-039L04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctgggacttgagtcaggaaaaaaatctaagccaccatctca
ttcccatgatgaacacactcctcaacccttcaactatttcaaagcccatt
tgtgggagaatggctgtacccatcctcccttcaagaagccaagacattaa
atctctgcagccataactgacattgaacagatgggtataggccgatgcta
caaagaagaaccctttttgtcctgagccctgatttaaaacttcaaaggcc
ctcactgtgttcaaaatggtgacgaggttctttgccaagaaaacttaccc
aggcagattatcttgctattccatgcacagatggatcccctgcaggactt
gataacacatctgggttgtccctttgatgaacaaagaggctctgtatgtc
atcatgactcattacagccctcatcggtatgcgtgtcagccagagattgc
caactagctggaaagaagtttttcaccatccacttacaagtaagttctca
gtttcatcagagcgagagctttattcccctcactttcaaatgattttgtg
aagaaatgagagcaaaatataaatgattttgctaggcagagaatcactgg
ttttcttaaggatgagttccaaaggcattgattgaatggagtatcaggag
aaagtttaggtctcttggggagaaaagaaagcttgttctgtggagcctgg
taagaaagttgtggtagtttgaatatgcttggtctgaggagtggcactat
ttggaggtgtggccttgttggaggaagtgtgtcattgtgggcatgggcaa
tgagaccctcctcctaactacatgggagccagtcttctcctagtggcctt
catatgaaggtgtagaactctcagctccacctgtaccatgcttgcctgga
taatgctcctgtcttgatgatatggacttaatctctgaacctgtaagcct
tccccagttaaatgttgtccttgtgagagttgatgagaacatcctgagtt
ttgccagcaaaacatggactagaaaatattatcctgagtgagtacttaga
cccaaaggacatgatagttgtactcctatagtgatatacacaaagtgaga
ttcccggaacattcagactcagagttacaggccaagggcccaggtgaggt
tgctatccactgggagaaaaaagcatcaccgggtaatggatggacatttg
tgcagggacgggaaggaaag
ttcactggcccccaactgctgctgagctacagctctgttggaagagggct
gtgtctgacatccatccctatgttaaactctttacatctggagcttcttc
ttaaagtctgtagtgacgaatatttcatactgaacatgttttgtgcacca
aaaatgaagaagataataacaatcccctcatcatgttacctgttagagtt
taagatccagcatattagtgaatcaacagaaaacacttaaacagaactca
tcctgatttcttctttgtagttctgaaacagatttctcttcttttctttt
tggtgtatatggtaatatgtgggagaggagcagtgggtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86806608_86806949
seq2: B6Ng01-039L04.g_71_412

seq1  TTCACTGGCCCCCAACTGCTGCTGAGCTACAGCTCTGTTGGAAGAGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGGCCCCCAACTGCTGCTGAGCTACAGCTCTGTTGGAAGAGGGCT  50

seq1  GTGTCTGACATCCATCCCTATGTTAAACTCTTTACATCTGGAGCTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGACATCCATCCCTATGTTAAACTCTTTACATCTGGAGCTTCTTC  100

seq1  TTAAAGTCTGTAGTGACGAATATTTCATACTGAACATGTTTTGTGCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTGTAGTGACGAATATTTCATACTGAACATGTTTTGTGCACCA  150

seq1  AAAATGAAGAAGATAATAACAATCCCCTCATCATGTTACCTGTTAGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAGAAGATAATAACAATCCCCTCATCATGTTACCTGTTAGAGTT  200

seq1  TAAGATCCAGCATATTAGTGAATCAACAGAAAACACTTAAACAGAACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCCAGCATATTAGTGAATCAACAGAAAACACTTAAACAGAACTCA  250

seq1  TCCTGATTTCTTCTTTGTAGTTCTGAAACAGATTTCTCTTCTTTTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATTTCTTCTTTGTAGTTCTGAAACAGATTTCTCTTCTTTTCTTTT  300

seq1  TGGTGTATATGGTAATATGTGGGAGAGGAGCAGTGGGTGTGT  342
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATATGGTAATATGTGGGAGAGGAGCAGTGGGTGTGT  342