MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-040C13
Chromosome	4 (Build37)
Map Location	27,495,881 - 27,497,055
singlet/doublet	singlet
Overlap gene	none
Upstream gene	none
Downstream gene	LOC100040691, Tpm3-rs2, LOC100040842, LOC100040735, LOC230044, LOC665141
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040691 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040691
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 5 Proteins pseudo : _no_value

name	Tpm3-rs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625912 MGI:99710
definition	note : tropomyosin 3, related sequence 2 pseudo : _no_value

name	LOC100040842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100040735 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC230044 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230044
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC665141 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100040735 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252122 GeneID:100040735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001475161.1

name	LOC100040735 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252123 GeneID:100040735
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475211.1

name	LOC100040842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040842
definition	number : 1 pseudo : _no_value

name	LOC230044 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230044
definition	number : 1 pseudo : _no_value

name	LOC230044 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230044
definition	number : 2 pseudo : _no_value

name	LOC665141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665141
definition	number : 1 pseudo : _no_value

name	LOC100040691 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252121 GeneID:100040691
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 5 Proteins product : similar to Nucleosome binding protein 1 pseudo : _no_value transcript_id : XR_032072.1

clone name	MSMg01-265H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146D07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-495N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534H18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-331E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059P20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-488K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479E18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-051I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-065A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-040C13.b	B6Ng01-040C13.g
ACC	DH867212	DH867213
length	1,101	1,163
definition	DH867212\|Mus musculus domesticus DNA, BAC clone: B6Ng01-040C13, 5' end.	DH867213\|Mus musculus domesticus DNA, BAC clone: B6Ng01-040C13, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccagttttatgtttaataccgaattctttacagaatgaaataaag tttttactggaataagatggcccattgtctgtcttaataagtttaggcaa tcccatggcattaaatgcttgtaggcaatgatcaattacgttttttgaag cttctcctgtatgcacagaagcaaaaagaaatcctgaacaagtatcaatg caaacatgtatatattttagtttttcaaattttgtataatgggttatatc catttgccaaatatgattaggcataaggcctctaggattaactcctagat gcggcactggagataaagtaatacatttaggacattgttttacgatcatt ctcgcttgctcctttgtgatcttatgtcggagccttagggtatgaataga aagatgaaacctttcgtgatcacgttgggccaaagcaacccgatcggaaa ctaaggcttctcctattagagctctatcaatgcgatcattaccctctgcc agaggtccaggaagaccagagtgagaccgtatgtggccaatataaaacgg attttttcgggcgagaatgatgttttgtaattctgaaaataaagatcctg acggcgtattgaagttaaacgtaccacaggttttcaataagggtactgac tgagcaacatataaactgtcagtaaaaatattaaaagcctcatgcacaga ctgaaaaaccttcagtactgttgttaatttggcaagctgagccgagagac caggagtctctacgataacctgttgattactaataagatatccagctcac cctttagaggagccatcagtaaaaatcaatagagcattatttaaagactg taagggaagtcatcttaggaatatcatatcatgcacatttaagaatttta tcaacctatcttgggggtagtggctatctagagttccttcaaaccctaat tgcgcaagcaaccatctgtactatgctgtttcagccagtgtcctgactca cgctgtatggctggacaatgatatctggctcctttaaataagtcaatgcc tgccttcttcagtgataatcacctgaatcacctgctcgggaatggccaga a	gaattcaattgtgctccttccatttaggtgcatataaagggaaatagtct cttgattatgaaatagctcagttccactctctagcaattgaattttataa atgtcattctgggttttgaaagatgatagtaatgagaagggtcagaaccg tagctgttgctttcagttattgccaaaacttttaagacactttagtatca ggtagaagaaaagtactaagtaaaaacaaattgtgatggttatttaaggg gtttctctgcttctgtagcagaagatcctgtttcctcagtgaactaatgt gtaagaacagctgttagaggaaaacagactttatgagtctggacgagacc tgaaaaacacatgtgtgggcatttcacctgaactgatgagaggcgtcacc ctagtttttctttctacccaggagtttattttgtttaattatttagctgc ataatttcactcacaatttcacttaaatattacctttaggagggctagac aggtggctcctccttccctgcttcatgtgcagcacttctgaatttggctg gtaggtgaaagaggaagaacaatcttacaagggtgtagtagaagctgcac tcccctgctagaacctacaacaatctctcaagatgtctattttatctgtt catggaagagtttgtcttctggcttttatagtatacctagagaatgggat atgtttgtttgggtttagttgaggctgaaggagtagataaaagattagca aacccacagggtagcattaagataatgaatcaaaatagcactgcctgaga aatgcaaatgtgttaagcctctttctactagtactagagaaggaaaagga aaaacacctaccctaagtaactagtagggtaagtctgaaactcacgcacc tttcagaatggacagaagacagagctcacaggctgagaaaaggatttcag tcaaactcaaacttcccagctatgtaaagtattgtagacagggagatttg aaactttaaatctgttcttcacagtctgcaggctgtgactgagaacaggc cttctccatgtctccattctggcttgacgtcttttagtctcattggatac tttatgtgagtcattcgtgaaaaaaaaaaaaaaaattgtttaagtggatg aaataatcccctt
quality values	Open. Hide. 8 6 7 10 61 47 32 13 61 61 61 61 47 50 35 35 47 61 61 55 61 61 61 61 61 61 13 15 16 16 19 18 44 31 28 43 25 41 59 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 39 49 44 25 30 30 61 44 44 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 55 59 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 50 61 61 61 61 61 55 61 61 47 61 61 61 61 61 61 61 61 53 53 61 61 61 61 61 61 61 61 61 61 61 50 53 61 61 53 61 61 53 61 61 61 61 61 50 61 61 61 43 53 47 61 61 61 61 53 61 61 42 61 53 61 50 61 53 61 61 50 61 61 61 61 47 61 61 61 50 45 61 61 61 61 61 61 41 43 53 61 53 61 61 47 61 61 61 40 61 52 61 61 45 53 53 61 50 57 53 57 42 42 40 53 52 53 53 40 53 57 57 47 45 53 53 47 47 53 57 57 42 47 50 57 53 42 53 53 50 45 45 38 50 53 40 53 53 53 53 47 53 52 29 53 45 53 50 42 50 39 53 45 47 57 53 38 53 42 45 30 53 25 57 39 52 52 28 39 57 52 45 53 38 53 24 45 43 28 53 42 53 38 34 28 34 32 11 22 53 30 45 52 45 52 33 39 32 14 53 40 52 33 43 34 45 52 27 29 50 43 25 50 42 40 45 30 29 22 24 28 20 25 8 23 27 27 53 25 42 40 44 42 28 52 35 35 27 57 33 42 29 41 32 41 44 25 36 53 18 40 32 31 28 42 33 53 53 53 15 29 34 33 32 40 40 44 52 32 29 31 17 57 24 32 57 16 7 41 34 37 40 35 31 47 15 32 25 5 38 19 30 17 30 17 17 13 37 37 25 30 22 16 25 53 57 21 17 26 25 19 16 37 33 30 16 22 39 25 17 35 20 34 51 38 14 30 22 38 39 24 51 48 38 30 30 34 25 28 29 25 29 15 9 11 14 29 32 47 51 51 31 19 34 24 28 51 10 9 27 28 28 31 28 29 28 36 21 37 29 31 31 29 35 29 25 38 30 30 45 30 29 39 22 29 22 29 18 6 12 22 15 29 29 28 26 31 17 41 15 23 18 14 15 25 33 23 27 22 28 14 25 29 21 43 29 17 22 14 36 17 39 10 27 38 20 25 28 34 28 28 18 14 12 14 7 17 19 8 22 8 21 5 12 29 14 27 25 20 17 12 7 28 14 20 9 6 7 7 7 7 10 29 7 26 18 10 36 36 19 26 41 46 16 29 28 18 16 20 15 30 20 31 14 24 19 31 22 21 22 6 17 11 22 36 13 20 14 28 16 17 8 32 17 23 7 4 7 17 25 16 7 5 20 8 7 16 17 6 10 6 9 5 9 16 8 5 12 12 30 8 7 12 7 13 5	Open. Hide. 61 61 49 49 61 59 38 15 17 15 10 12 13 13 13 23 36 30 43 52 59 38 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 45 39 36 26 26 28 25 28 39 39 59 35 59 52 52 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 55 44 55 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 61 59 61 61 52 61 61 59 61 61 61 59 59 61 59 59 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 59 59 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 55 44 59 59 59 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 55 55 52 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 50 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 55 61 55 61 55 61 61 61 61 61 61 61 50 55 55 61 61 55 61 61 61 61 61 61 55 61 61 55 61 61 61 61 55 55 53 61 53 50 50 53 61 61 53 53 38 61 61 47 61 53 53 50 29 61 61 53 61 61 61 61 61 61 47 36 33 47 43 33 47 47 61 61 53 52 61 61 50 50 50 52 50 43 43 47 52 35 50 61 52 61 61 23 61 38 61 61 61 61 52 53 52 43 52 45 61 47 39 43 61 61 33 43 61 61 53 45 45 53 45 52 53 53 50 42 57 52 47 39 39 57 57 53 42 40 53 35 31 50 57 50 57 34 45 38 47 47 45 47 53 32 37 28 36 53 53 47 16 53 28 53 53 53 43 19 47 42 30 47 45 28 40 27 50 42 36 37 34 42 28 52 53 40 52 37 50 39 30 53 53 28 45 24 17 57 50 38 52 31 47 28 33 25 35 33 34 52 17 18 35 37 52 35 28 34 42 42 37 52 47 30 53 18 50 40 40 42 40 17 53 36 40 47 22 28 19 13 11 22 20 34 53 34 27 52 50 34 32 17 14 24 27 36 40 37 24 28 45 28 40 36 36 33 27 29 8 21 27 34 40 37 40 52 28 40 37 34 40 13 53 53 45 36 37 24 57 57 57 22 25 23 23 35 34 18 20 53 6 13 43 29 24 37 29 25 30 18 12 7 14 21 25 51 51 18 31 37 24 29 33 34 14 30 45 27 29 30 33 31 34 35 30 20 27 48 20 51 12 12 15 20 32 27 18 29 28 26 26 21 19 46 16 45 15 20 25 21 37 11 25 38 33 13 18 12 27 29 29 32 28 29 14 33 51 39 25 16 29 14 6 51 28 25 14 33 25 35 18 46 19 29 17 22 16 46 18 29 23 27 21 43 33 25 18 31 28 17 22 30 13 46 51 38 13 10 6 13 33 34 10 9 11 20 9 7 7 44 12 16 36 6 6 41 34 33 27 51 23 9 9 46 39 39 51 31 16 10 5 13 12 12 7 5 5 6 8 16 19 17 15 38 12 12 9 12 19 23 12 14 15 17 15 17 18 13 7 25 9 34 12 8 6 23 29 8 9 12 16 12 8 7 33 19 19 22 23 20 34 10 8 9 24 22 25 30 12 9 8 5 6 5 4 4 8 13 7 10 31 20 6 6 6 4 7 8 16 9 5 6 12 9 13 6 6 11 7 9 21 22 5 9 11 7 16 7 13 10 4 14 9 20 10 5 4 6 6 14 26 26 27 27 12 9 25 32 18 23 3 19 23 9 15 23 11 5 4 23 8 7 5 16 7 5 8 5 4 6 8 5 7 9 22 7 27 27 7 3 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_27495881_27497055
seq2: B6Ng01-040C13.g_71_1233 (reverse)

seq1  AAGGTGATTATTTCTCATCCATTTTAACAATTTTTTTTTTTTTTTTTTTT  50
      |||| |||||||  ||||||| || |||||||||||||||||||||    
seq2  AAGGGGATTATT--TCATCCACTTAAACAATTTTTTTTTTTTTTTT----  44

seq1  ACA-GATGGACTACACTTAAATGTAT-CAGTGAGGACTAAAAG-CGTTCC  97
       || ||  |||| ||| |||| |||| || ||| ||||||||| |||  |
seq2  -CACGAATGACT-CACATAAA-GTATCCAATGA-GACTAAAAGACGT--C  88

seq1  CAG-CAGAATGAAGACATGGAGAAGCCCTGTTCTTCAGTCACAGCCTGCA  146
       || ||||||| ||||||||||||| ||||||| ||||||||||||||||
seq2  AAGCCAGAATGGAGACATGGAGAAGGCCTGTTC-TCAGTCACAGCCTGCA  137

seq1  GGACTGTG-AGAACAGATTTTAAAGTTTCAAATCCTCCCTGTCTACAATA  195
       ||||||| |||||||| ||||||||||||||| ||||||||||||||||
seq2  -GACTGTGAAGAACAGA-TTTAAAGTTTCAAAT-CTCCCTGTCTACAATA  184

seq1  CTTTTACATAGCTGGGAAGTTTGAGTTTGACTGAAATCCTTTTCTCAGCC  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTTACATAGCTGGGAAGTTTGAGTTTGACTGAAATCCTTTTCTCAGCC  233

seq1  TGTGAGCTCTGTCCTTCTGTCCATTCTG-AAGGTGCGTGAGTTTCAGACT  294
      |||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  TGTGAGCTCTGT-CTTCTGTCCATTCTGAAAGGTGCGTGAGTTTCAGACT  282

seq1  TACCCTACTTAGTTACTTA-GGTAGGTGTTTTTCCTTTTCCTTCTCTAGT  343
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  TACCCTAC-TAGTTACTTAGGGTAGGTGTTTTTCCTTTTCCTTCTCTAGT  331

seq1  ACTAGTAGAAAGAGGCTTAACACATTTGCATTTCTCAGGCAGTGCTATTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAGAAAGAGGCTTAACACATTTGCATTTCTCAGGCAGTGCTATTT  381

seq1  TGATTCATTATCTTAATGCTACCCTGTGGGTTTGCTAATCTTTTATCTAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCATTATCTTAATGCTACCCTGTGGGTTTGCTAATCTTTTATCTAC  431

seq1  TCCTTCAGCCTCAACTAAACCCAAACAAACATATCCCATTCTCTAGGTAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGCCTCAACTAAACCCAAACAAACATATCCCATTCTCTAGGTAT  481

seq1  ACTATAAAAGCCAGAAGACAAACTCTTCCATGAACAGATAAAATAGACAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAAAAGCCAGAAGACAAACTCTTCCATGAACAGATAAAATAGACAT  531

seq1  CTTGAGAGATTGTTGTAGGTTCTAGCAGGGGAGTGCAGCTTCTACTACAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGATTGTTGTAGGTTCTAGCAGGGGAGTGCAGCTTCTACTACAC  581

seq1  CCTTGTAAGATTGTTCTTCCTCTTTCACCTACCAGCCAAATTCAGAAGTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAAGATTGTTCTTCCTCTTTCACCTACCAGCCAAATTCAGAAGTG  631

seq1  CTGCACATGAAGCAGGGAAGGAGGAGCCACCTGTCTAGCCCTCCTAAAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACATGAAGCAGGGAAGGAGGAGCCACCTGTCTAGCCCTCCTAAAGG  681

seq1  TAATATTTAAGTGAAATTGTGAGTGAAATTATGCAGCTAAATAATTAAAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTAAGTGAAATTGTGAGTGAAATTATGCAGCTAAATAATTAAAC  731

seq1  AAAATAAACTCCTGGGTAGAAAGAAAAACTAGGGTGACGCCTCTCATCAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACTCCTGGGTAGAAAGAAAAACTAGGGTGACGCCTCTCATCAG  781

seq1  TTCAGGTGAAATGCCCACACATGTGTTTTTCAGGTCTCGTCCAGACTCAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTGAAATGCCCACACATGTGTTTTTCAGGTCTCGTCCAGACTCAT  831

seq1  AAAGTCTGTTTTCCTCTAACAGCTGTTCTTACACATTAGTTCACTGAGGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGTTTTCCTCTAACAGCTGTTCTTACACATTAGTTCACTGAGGA  881

seq1  AACAGGATCTTCTGCTACAGAAGCAGAGAAACCCCTTAAATAACCATCAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATCTTCTGCTACAGAAGCAGAGAAACCCCTTAAATAACCATCAC  931

seq1  AATTTGTTTTTACTTAGTACTTTTCTTCTACCTGATACTAAAGTGTCTTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTTTTACTTAGTACTTTTCTTCTACCTGATACTAAAGTGTCTTA  981

seq1  AAAGTTTTGGCAATAACTGAAAGCAACAGCTACGGTTCTGACCCTTCTCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTGGCAATAACTGAAAGCAACAGCTACGGTTCTGACCCTTCTCA  1031

seq1  TTACTATCATCTTTCAAAACCCAGAATGACATTTATAAAATTCAATTGCT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCATCTTTCAAAACCCAGAATGACATTTATAAAATTCAATTGCT  1081

seq1  AGAGAGTGGAACTGAGCTATTTCATAATCAAGAGACTATTTCCCTTTATA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGGAACTGAGCTATTTCATAATCAAGAGACTATTTCCCTTTATA  1131

seq1  TGCACCTAAATGGAAGGAGCACAATTGAATTC  1175
      ||||||||||||||||||||||||||||||||
seq2  TGCACCTAAATGGAAGGAGCACAATTGAATTC  1163

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information