BAC Information

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BAC

Clone NameB6Ng01-043A03
Chromosome4 (Build37)
Map Location 31,667,589 - 31,853,462
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040864, LOC100040891
Downstream geneMap3k7, LOC665218, LOC665228, LOC665232, Bach2, Gja10, Casp8ap2, Mdn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043A03.bB6Ng01-043A03.g
ACCDH869202DH869203
length1,0261,067
definitionDH869202|Mus musculus domesticus DNA, BAC clone: B6Ng01-043A03, 5' end.DH869203|Mus musculus domesticus DNA, BAC clone: B6Ng01-043A03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,852,921 - 31,853,462)(31,667,589 - 31,668,662)
sequence
gaattctgcatttattagatttttcatcaattaatcaatcaatcaattaa
ttaattaaccttacatccctatcgaaacttcttgtccctctcttctacca
gcccctctctctcacccctcctcccccaagcccctccttgctttctcctc
agaaaaggggaggcctcccatggatatcaaggcaccttggcatatcaagt
tgcagtaggcacatctcctattgaggttagacaaggcagcccagttaggg
aaaagaaatccaaaggcaggcgcagggtcagagacagcctgctgttcctg
ctgttaggagtcccatgtgaacaccaagctgcacatttgttacatatgtg
taaagagcctaggtccatcccatacactctctccggttggtggtttagtc
tctgtgagcccccatgggcccaggttagattctgtaggttttcttgtggt
gtctttgacccctctggctccttcaatccttcctccccgtctttcacagg
aatccccaagctttgcttaatatttggcggtggatctctgcatcagtttc
caccagtttctgcataaagactctcagatgacagttatgctaggctcccc
tggtctgcaagtatagccagatatcactaatagtgtcaggagtaggttct
ctctcctggtatgggtggtctcaagctgggccagtccttggttggccttt
ccctcaatttctgctccatctttacccctgcaccgagtttgttaagtttg
tgaggcttatgacttgatgtgatgattttatatacgaatttgataaagtg
gatgacagacaaatgtttagagcatcatttgtgctcctggccattatgct
ttcccttttcacaggtctagatagtgctcgggtggtagggcagggactgg
gcagccccactcctgcccagacacacatagctgccgtgtgacctgtaccc
tctcttccccagccatagtaatctggaagcttagttaaatgataaagtct
aagagtgtaattcttacaccagaatc
gaattctcctataaaactacatccacattggcatattgtattcttcacgg
aagtggtaaaatactaattcaaattcagcaataaaagagatattttaaaa
gtttgcttttcgttcaaaaatgagggaaggttaattgagtcattaaactc
ctcggtaaggactctgagacagaagtcactgggatcagagcaggagagaa
aggattcagaaaggaataaatgtgacgggcaccctacgaagtacgaatgg
agcagaacagaaacaggttacctcaccgctaagtcacacagcagggaatg
agccaggcagactctcactaacaacataaataatatggttagatataagt
agatgctttaaaaggcaaaaatgaatctatattgtattggaatgtacaca
caggcggtaaaatgataaagaaactctagagactggattattcaaaacgc
tgggattttgaactctctctgggggaaggagaagcttgtgacaaatcaga
gagcagtgtgctagggccaaccatcagacatgagtgaattaaaaaaaatc
tagtcatgtaaaaaaaaatgtttgctttgtgtcttacaattttttggtat
atgtcttgtatttttccaggagtttccccatgtactatcttaaattttac
aaaaataaaaagaaaatgtatttaacaccataatgtagcttaatctctgc
cgtcttctccctggtttatgccttgtcttctttcacagttgtcatgtatc
ttgctcaagactgtgtctccctgaaagctgtgtctgtgtgtctgtctgga
gtctgtgtccccgaaaggatgtgtccactggagaacatgtctctctggag
tctgtgtcccctgaacagtgtttctcactagagactatcttttctttttt
tttttcaaaagataatttgcccgttttcctatattgcaccttctttttca
cctcgttttaaaactcttctttccatttttccagtttattatattattgc
atggaataactttacttctaccacaggaatatagctcgttagttttcata
attttattaagggtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_31852921_31853462
seq2: B6Ng01-043A03.b_43_584 (reverse)

seq1  TGCAGAGATCCACCGCCAAATATTAAGCAAAGCTTGGGGATTCCTGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGATCCACCGCCAAATATTAAGCAAAGCTTGGGGATTCCTGTGAA  50

seq1  AGACGGGGAGGAAGGATTGAAGGAGCCAGAGGGGTCAAAGACACCACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGGGAGGAAGGATTGAAGGAGCCAGAGGGGTCAAAGACACCACAAG  100

seq1  AAAACCTACAGAATCTAACCTGGGCCCATGGGGGCTCACAGAGACTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTACAGAATCTAACCTGGGCCCATGGGGGCTCACAGAGACTAAAC  150

seq1  CACCAACCGGAGAGAGTGTATGGGATGGACCTAGGCTCTTTACACATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACCGGAGAGAGTGTATGGGATGGACCTAGGCTCTTTACACATATG  200

seq1  TAACAAATGTGCAGCTTGGTGTTCACATGGGACTCCTAACAGCAGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATGTGCAGCTTGGTGTTCACATGGGACTCCTAACAGCAGGAACA  250

seq1  GCAGGCTGTCTCTGACCCTGCGCCTGCCTTTGGATTTCTTTTCCCTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGTCTCTGACCCTGCGCCTGCCTTTGGATTTCTTTTCCCTAACT  300

seq1  GGGCTGCCTTGTCTAACCTCAATAGGAGATGTGCCTACTGCAACTTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCCTTGTCTAACCTCAATAGGAGATGTGCCTACTGCAACTTGATA  350

seq1  TGCCAAGGTGCCTTGATATCCATGGGAGGCCTCCCCTTTTCTGAGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGTGCCTTGATATCCATGGGAGGCCTCCCCTTTTCTGAGGAGAA  400

seq1  AGCAAGGAGGGGCTTGGGGGAGGAGGGGTGAGAGAGAGGGGCTGGTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGAGGGGCTTGGGGGAGGAGGGGTGAGAGAGAGGGGCTGGTAGAA  450

seq1  GAGAGGGACAAGAAGTTTCGATAGGGATGTAAGGTTAATTAATTAATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGACAAGAAGTTTCGATAGGGATGTAAGGTTAATTAATTAATTGA  500

seq1  TTGATTGATTAATTGATGAAAAATCTAATAAATGCAGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGATTAATTGATGAAAAATCTAATAAATGCAGAATTC  542

seq1: chr4_31667589_31668662
seq2: B6Ng01-043A03.g_68_1134

seq1  GAATTCTCCTATAAAACTACATCCACATTGGCATATTGTATTCTTCACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTATAAAACTACATCCACATTGGCATATTGTATTCTTCACGG  50

seq1  AAGTGGTAAAATACTAATTCAAATTCAGCAATAAAAGAGATATTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTAAAATACTAATTCAAATTCAGCAATAAAAGAGATATTTTAAAA  100

seq1  GTTTGCTTTTCGTTCAAAAATGAGGGAAGGTTAATTGAGTCATTAAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTTTCGTTCAAAAATGAGGGAAGGTTAATTGAGTCATTAAACTC  150

seq1  CTCGGTAAGGACTCTGAGACAGAAGTCACTGGGATCAGAGCAGGAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTAAGGACTCTGAGACAGAAGTCACTGGGATCAGAGCAGGAGAGAA  200

seq1  AGGATTCAGAAAGGAATAAATGTGACGGGCACCCTACGAAGTACGAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCAGAAAGGAATAAATGTGACGGGCACCCTACGAAGTACGAATGG  250

seq1  AGCAGAACAGAAACAGGTTACCTCACCGCTAAGTCACACAGCAGGGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACAGAAACAGGTTACCTCACCGCTAAGTCACACAGCAGGGAATG  300

seq1  AGCCAGGCAGACTCTCACTAACAACATAAATAATATGGTTAGATATAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCAGACTCTCACTAACAACATAAATAATATGGTTAGATATAAGT  350

seq1  AGATGCTTTAAAAGGCAAAAATGAATCTATATTGTATTGGAATGTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTTAAAAGGCAAAAATGAATCTATATTGTATTGGAATGTACACA  400

seq1  CAGGCGGTAAAATGATAAAGAAACTCTAGAGACTGGATTATTCAAAACGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGGTAAAATGATAAAGAAACTCTAGAGACTGGATTATTCAAAACGC  450

seq1  TGGGATTTTGAACTCTCTCTGGGGGAAGGAGAAGCTTGTGACAAATCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTTTGAACTCTCTCTGGGGGAAGGAGAAGCTTGTGACAAATCAGA  500

seq1  GAGCAGTGTGCTAGGGCCAACCATCAGACATGAGTGAATTAAAAAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGTGCTAGGGCCAACCATCAGACATGAGTGAATTAAAAAAAATC  550

seq1  TAGTCATGTAAAAAAAAATGTTTGCTTTGTGTCTTACAATTTTTTGGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATGTAAAAAAAAATGTTTGCTTTGTGTCTTACAATTTTTTGGTAT  600

seq1  ATGTCTTGTATTTTTCCAGGAGTTTCCCCATGTACTATCTTAAATTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTGTATTTTTCCAGGAGTTTCCCCATGTACTATCTTAAATTTTAC  650

seq1  AAAAATAAAAAGAAAATGTATTTAACACCATAATGTAGCTTAATCTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAAGAAAATGTATTTAACACCATAATGTAGCTTAATCTCTGC  700

seq1  CGTCTTCTCCCTGGTTTATGCCTTGTCTTCTTTCACAGTTGTCATGTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCTCCCTGGTTTATGCCTTGTCTTCTTTCACAGTTGTCATGTATC  750

seq1  TTGCTCAAGACTGTGTCTCCCTGAAAGCTGTGTCTGTGTGTCTGTCTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAAGACTGTGTCTCCCTGAAAGCTGTGTCTGTGTGTCTGTCTGGA  800

seq1  GTCTGTGTCCCCG-AAGGATGTGTCCACTGGAGAACATGTCTCTCTGGAG  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTCCCCGAAAGGATGTGTCCACTGGAGAACATGTCTCTCTGGAG  850

seq1  TCTGTGTCCCCTGAACAGTGTTTCTCACTAGAGACTATCTTTTCTTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCCCCTGAACAGTGTTTCTCACTAGAGACTATCTTTTCTTTTTT  900

seq1  TTTTTCAAAAAGATTAATTTGCCCGTTTTCCTATATTGCACCTTCTTTTT  949
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTTC-AAAAGA-TAATTTGCCCGTTTTCCTATATTGCACCTTCTTTTT  948

seq1  CCACCTCGTTTTTAAAACTCTTCTTTCCATTTTTCCAGTTTATTATATTA  999
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  -CACCTCG-TTTTAAAACTCTTCTTTCCATTTTTCCAGTTTATTATATTA  996

seq1  TTGCATGGAAATAACTTTACTTCTAACACAGGAAATATAGCTCGTTAGTT  1049
      |||||||| |||||||||||||||| |||||| |||||||||||||||||
seq2  TTGCATGG-AATAACTTTACTTCTACCACAGG-AATATAGCTCGTTAGTT  1044

seq1  TTCAATAATTTTATTAAAGGGTAGT  1074
      ||| ||||||||||| |||||||||
seq2  TTC-ATAATTTTATT-AAGGGTAGT  1067