BAC Information

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BAC

Clone NameB6Ng01-044P02
Chromosome4 (Build37)
Map Location 22,026,629 - 22,027,573
singlet/doubletsinglet
Overlap genenone
Upstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik
Downstream geneLOC100040379, Fbxl4, Pou3f2, LOC664911, 1700025O08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044P02.bB6Ng01-044P02.g
ACCDH870548DH870549
length442944
definitionDH870548|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P02, 5' end.DH870549|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttaaaagaaaactagaaatctacaagaagagccagctctgtcactccgtg
gcatatatacctaaatggctcagcctccttctccacggatacttgctccg
cagtgttcattgctgccctatatgcaatagctggggactggaactaactg
aaatgtccttcaccaactgaattaagagtgaaaatgtggctcataacaca
agatggaaaaatattcagctgtaaaggtgaaaggtgaaattatgaaattt
ataggcaaatagacgaatctagaaatgattgtactggatgaggtaattca
gaccagaaagaccgattctgcaggttctctcttacatcatttcctagctc
caagtcttcagatatacatatataacatgaagtaaacacagaaaccagaa
agatataaaggggccagtgagtgtgggggttagggtggggga

gaattccttgtcctcaatatagctataatttaacaactattgctgtagag
aaatggatggcatagagaaatgaaattcgacatatacccaggctgcgtag
ttaagtttacatagcagtcttgaggtaaacagagttgcctactacagaat
taaatcttgtcctatagtgagtacattcattggttcttgttctgaaaggt
gatttgtgctgtttcagcaaggcctgacaatggctggtggctacgattag
ctttcctttcctgctcttcctgcagtgaatgattggcattggaaacagaa
ggtgggccatatggaaacagttccaaagaggttcgtgatttgcaaattac
tggcacagataatctctatggccctttcctgttccgtgtgcccctgagag
ctgtgtcaaactggtcctgtttgaccatgaagcacaatgtagatggattc
accagcttcttcctcaggaggtgaggagggcttcatttcaccggactcca
catttggcaaggttatacatgtgagcaggagatcaagactagatgtacag
agacattggtcagcaattggtatggaattaaatggccagttccaatgtaa
tgccattagcctgtttttttttttcctttgtagaaacaattagaacatcc
aaatactgtattcataaattgcatctgggatttaatgggtaatgttttcc
ttcctgtctgagttgccctcttcttcccattcataatttttcttttttct
tttcttcttttgttctttaatgctcaaatctaattcacatgtgggtcaga
gtaaaagcactctgtacagtcttttaatgttaagattgccatcctttaga
gtctttgggtcactgaagagagtcactcttttgacacccagtcctaaaat
aataataaaagaaggcttcaggaaatttatcaaatggctggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22026629_22027573
seq2: B6Ng01-044P02.g_69_1012

seq1  GAATTCCTTGTCCTCAATATAGCTATAATTTAACAACTATTGCTGTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTCCTCAATATAGCTATAATTTAACAACTATTGCTGTAGAG  50

seq1  AAATGGATGGCATAGAGAAATGAAATTCGACATATACCCAGGCTGCGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATGGCATAGAGAAATGAAATTCGACATATACCCAGGCTGCGTAG  100

seq1  TTAAGTTTACATAGCAGTCTTGAGGTAAACAGAGTTGCCTACTACAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTACATAGCAGTCTTGAGGTAAACAGAGTTGCCTACTACAGAAT  150

seq1  TAAATCTTGTCCTATAGTGAGTACATTCATTGGTTCTTGTTCTGAAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTGTCCTATAGTGAGTACATTCATTGGTTCTTGTTCTGAAAGGT  200

seq1  GATTTGTGCTGTTTCAGCAAGGCCTGACAATGGCTGGTGGCTACGATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTGCTGTTTCAGCAAGGCCTGACAATGGCTGGTGGCTACGATTAG  250

seq1  CTTTCCTTTCCTGCTCTTCCTGCAGTGAATGATTGGCATTGGAAACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTCCTGCTCTTCCTGCAGTGAATGATTGGCATTGGAAACAGAA  300

seq1  GGTGGGCCATATGGAAACAGTTCCAAAGAGGTTCGTGATTTGCAAATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCCATATGGAAACAGTTCCAAAGAGGTTCGTGATTTGCAAATTAC  350

seq1  TGGCACAGATAATCTCTATGGCCCTTTCCTGTTCCGTGTGCCCCTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAGATAATCTCTATGGCCCTTTCCTGTTCCGTGTGCCCCTGAGAG  400

seq1  CTGTGTCAAACTGGTCCTGTTTGACCATGAAGCACAATGTAGATGGATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCAAACTGGTCCTGTTTGACCATGAAGCACAATGTAGATGGATTC  450

seq1  ACCAGCTTCTTCCTCAGGAGGTGAGGAGGGCTTCATTTCACCGGACTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTCTTCCTCAGGAGGTGAGGAGGGCTTCATTTCACCGGACTCCA  500

seq1  CATTTGGCAAGGTTATACATGTGAGCAGGAGATCAAGACTAGATGTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGCAAGGTTATACATGTGAGCAGGAGATCAAGACTAGATGTACAG  550

seq1  AGACATTGGTCAGCAATTGGTATGGAATTAAATGGCCAGTTCCAATGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTGGTCAGCAATTGGTATGGAATTAAATGGCCAGTTCCAATGTAA  600

seq1  TGCCATTAGCCTGTTTTTTTTTTTCCTTTGTAGAAACAATTAGAACATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTAGCCTGTTTTTTTTTTTCCTTTGTAGAAACAATTAGAACATCC  650

seq1  AAATACTGTATTCATAAATTGCATCTGGGATTTAAT-GGTAATG-TTTCC  698
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  AAATACTGTATTCATAAATTGCATCTGGGATTTAATGGGTAATGTTTTCC  700

seq1  TTCCTGTCTGAGTTGCCCTCTTCTTCCCATTCATAATTTTTTCTTTTTCT  748
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  TTCCTGTCTGAGTTGCCCTCTTCTTCCCATTCATAATTTTTCTTTTTTCT  750

seq1  TTTCTTCTTTTGTTC-TTAATGCTCAAATCTAATTCACATGTGGGTCAGA  797
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTTTGTTCTTTAATGCTCAAATCTAATTCACATGTGGGTCAGA  800

seq1  GTAAAAGCACTCTGTACAGTCTTTTAAATGTTAAGATTGCCATCC-TTAG  846
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  GTAAAAGCACTCTGTACAGTCTTTT-AATGTTAAGATTGCCATCCTTTAG  849

seq1  AGGTCTTGGGGTCACTGAAGAGAGTCACTCTTTTGACACCCAGTCTTAAA  896
      | ||||| ||||||||||||||||||||||||||||||||||||| | ||
seq2  A-GTCTTTGGGTCACTGAAGAGAGTCACTCTTTTGACACCCAGTCCT-AA  897

seq1  AATAATAATAAAAGTAGGCTTTCAGGAAATTTAGTCAAATGGCTGGCAT  945
      |||||||||||||| |||| ||||||||||||| ||||||||||||| |
seq2  AATAATAATAAAAGAAGGC-TTCAGGAAATTTA-TCAAATGGCTGGCTT  944


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