BAC Information

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BAC

Clone NameB6Ng01-045F14
Chromosome4 (Build37)
Map Location 76,886,884 - 77,018,561
singlet/doubletdoublet
Overlap genenone
Upstream genePtprd, LOC667858, LOC667862
Downstream geneLOC100039974, LOC100039996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045F14.bB6Ng01-045F14.g
ACCDH870830DH870831
length1,0641,106
definitionDH870830|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F14, 5' end.DH870831|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,886,884 - 76,887,973)(77,017,468 - 77,018,561)
sequence
gaattctaagcaccataatattgcctagtttttatagctttcatcttctt
tttgtcaaatcctttacactctgtaattttcatctgacctttcaacataa
gcttgaattctgtgactgaggtttacaatggggtcatttttcctactatt
ttgacaaaattaaaagaagttcttgcttgaaaaatataatatatgttagc
tctttgcttctttctaattttaatgactcaagtgatgagagagtgctttg
ttattggctacatcagcagttagctttgccaagtgaggttgatatctctt
ctaaatgcaaattaaaaggaaaaaaaaaaagaacaacgcattagccgaca
gcaaaatgatatggtacatggccagcaaggtaatggcctctgttgcaagc
caagccttcatatcgagggttatcttacaaagagttgagaacttaaaacc
tagcttgatatctatatcatcctgttgatatctgtaaaggtcaggagtag
ggatggaagaggagataaagaaaaaacaaacaaacaaacaaacaaaaatc
taaggcctgaaataattattggtattcttcattaacagcttagtgcattg
cgagctgtcttaagtcctgtggaaacattcattattcagtctgcaaggat
aagaatcacgaggtacatatctcatttttctaagagcatgtttggtgaca
gcaaagaagctgcgatgtcctcttcattcccgaaggacagtatgactata
tcttatccaatcgttgctaatagaaacatatctcattctattttttagag
ttttatttcatgttctaaaaaacattcccgtttttctcttcccgaagagt
accatgtgaacagaaatgaccatccctcatccatttcatatagaaacact
catagcactcagtttccctatcataatatgtttgatgtcatgagttctat
gtatacatgcagacatgagtcgactcagagaaaaattattagaacactta
gtgatgagctgctctgatgctcttgcaatgtgatgtgatgctcatgtgaa
accagttgcacaat
gaattcctacaactgatagacaacttttgcaacgtgtctgggtataaaat
taacttaaacaaatcaataattaccttcctttatacaaatgccaatcagc
gtgagaaagaaattacggcaacaacacaattcacaatagtcacaaatact
ataaaatatcttggtgcgactcttataaagcaagggaaagatctgtatga
aaagaacttcaggtccctgaaaaaagaaataatatttatttatttattta
ttgcattatttttattagttattttatttatttaaattacaaatgttgct
gccctttctcgttccccttccatgagttcttcacctcatctgacctccca
tttgtttctaagagtgtgctctcactctcacctcatcctgcttgggaagg
tggaacctgaagagacagtctccagtagatagacatgttccccatttgag
gcatggggccacctgaccatcttgaaaaactttggcccagattttttcct
gtctaaaggaaattcagtggcaaaaatggagcaaacttaattattctgaa
gcaatttatttttgacaattaatttaacatttacaaacaatgcactctga
gagctcagtctcagagaatgataaataagttgtataaaactaaaagtgct
taataatgcaagggacaaaaattcaaatccaggaagtatccaattctaat
tttaactacaaaataaagaatttgaatctacactattttttctctttata
ctgtatgtataaagtaactcttaagcctcataatcactgccatcgtaaag
aactcctacaagcatttatggtgtaatgcatgaaaattgcacatgttgtg
tggtgtggttggcacatcttgtgttctcatgttctggacacactgtactt
gcttttgtatctttatctttactacatgcctcaatttaaatgctccctgt
ctgtttcttctcagtgtagacaacttacatcattctgtactcactaaatc
agtagtacaattagtcacagactgattatgctcataggtactttagagac
caagttggagctggacaaaaatggaacatctaagactgcaatcagggatt
catttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_76886884_76887973
seq2: B6Ng01-045F14.b_46_1109

seq1  GAATTCTAAGCACCATAATATTGCCTAGTTTTTATAGCTTTCATCTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCACCATAATATTGCCTAGTTTTTATAGCTTTCATCTTCTT  50

seq1  TTTGTCAAATCCTTTACACTCTGTAATTTTCATCTGACCTTTCAACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAAATCCTTTACACTCTGTAATTTTCATCTGACCTTTCAACATAA  100

seq1  GCTTGAATTCTGTGACTGAGGTTTACAATGGGGTCATTTTTCCTACTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAATTCTGTGACTGAGGTTTACAATGGGGTCATTTTTCCTACTATT  150

seq1  TTGACAAAATTAAAAGAAGTTCTTGCTTGAAAAATATAATATATGTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAAATTAAAAGAAGTTCTTGCTTGAAAAATATAATATATGTTAGC  200

seq1  TCTTTGCTTCTTTCTAATTTTAATGACTCAAGTGATGAGAGAGTGCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTCTTTCTAATTTTAATGACTCAAGTGATGAGAGAGTGCTTTG  250

seq1  TTATTGGCTACATCAGCAGTTAGCTTTGCCAAGTGAGGTTGATATCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGCTACATCAGCAGTTAGCTTTGCCAAGTGAGGTTGATATCTCTT  300

seq1  CTAAATGCAAATTAAAAGGAAAAAAAAAAAGAACAACGCATTAGCCGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGCAAATTAAAAGGAAAAAAAAAAAGAACAACGCATTAGCCGACA  350

seq1  GCAAAATGATATGGTACATGGCCAGCAAGGTAATGGCCTCTGTTGCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGATATGGTACATGGCCAGCAAGGTAATGGCCTCTGTTGCAAGC  400

seq1  CAAGCCTTCATATCGAGGGTTATCTTACAAAGAGTTGAGAACTTAAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTCATATCGAGGGTTATCTTACAAAGAGTTGAGAACTTAAAACC  450

seq1  TAGCTTGATATCTATATCATCCTGTTGATATCTGTAAAGGTCAGGAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGATATCTATATCATCCTGTTGATATCTGTAAAGGTCAGGAGTAG  500

seq1  GGATGGAAGAGGAGATAAAGAAAAAACAAACAAACAAACAAACAAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAAGAGGAGATAAAGAAAAAACAAACAAACAAACAAACAAAAATC  550

seq1  TAAGGCCTGAAATAATTATTGGTATTCTTCATTAACAGCTTAGTGCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCCTGAAATAATTATTGGTATTCTTCATTAACAGCTTAGTGCATTG  600

seq1  CGAGCTGTCTTAAGTCCTGTGGAAACATTCATTATTCAGTCTGCAAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTGTCTTAAGTCCTGTGGAAACATTCATTATTCAGTCTGCAAGGAT  650

seq1  AAGAATCAGGAGGTACATATCTCATTTTTCTAAGAGCATGTTTGGTGACA  700
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCACGAGGTACATATCTCATTTTTCTAAGAGCATGTTTGGTGACA  700

seq1  GCAAAGAAGCTGCGATGTCCTCTTCATTCCCGAAGGACAGTATGACTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAGCTGCGATGTCCTCTTCATTCCCGAAGGACAGTATGACTATA  750

seq1  TCTTATCCAATCGTTGCTAATAGAAACATATCTCA-TCTA-TTTTTAGAG  798
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  TCTTATCCAATCGTTGCTAATAGAAACATATCTCATTCTATTTTTTAGAG  800

seq1  TTTTATTTCATGTTCTAAAAAACATTCCCGTTTTTCTCTTCCCGAAGAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCATGTTCTAAAAAACATTCCCGTTTTTCTCTTCCCGAAGAGT  850

seq1  ACCATGTGAACAGAAATGACCATCCCTCATCCATTTCATTATAGAAACAC  898
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACCATGTGAACAGAAATGACCATCCCTCATCCATTTCA-TATAGAAACAC  899

seq1  TCATAAGCACTCAGTTTCCCCTATCAATAAATATGTTTGATGTTCCATGG  948
      |||| |||||||||||| ||||||||   ||||||||||||||  |||| 
seq2  TCAT-AGCACTCAGTTT-CCCTATCA--TAATATGTTTGATGT--CATG-  942

seq1  AAGTTCTATGTAATACATGCAGAACAATGGAGTCAGACTCAGAGATAAAT  998
       |||||||||| |||||||||| |||   ||||| |||||||||| ||||
seq2  -AGTTCTATGT-ATACATGCAG-ACA--TGAGTC-GACTCAGAGAAAAAT  986

seq1  TATTACCAAAACAACTTTAAGTGATGAGCTTGCCTCTGATGCTTCCCTGC  1048
      ||||   | ||| ||||  |||||||||||   ||||||||||  | |||
seq2  TATT---AGAAC-ACTT--AGTGATGAGCT--GCTCTGATGCT--CTTGC  1026

seq1  AGATGTGATGTGGATGCTCAGTGTGAGAGCAAGTTGCACAAT  1090
      | ||||||||| |||||||| ||||| | | |||||||||||
seq2  A-ATGTGATGT-GATGCTCA-TGTGA-AACCAGTTGCACAAT  1064

seq1: chr4_77017468_77018561
seq2: B6Ng01-045F14.g_103_1170 (reverse)

seq1  GAAATGGATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCT  50
      |||||| |||||||   || ||||||| |||||| |||||  ||||||| 
seq2  GAAATGAATCCCTG---ATTGCAGTCT-TAGATGTTCCAT--TTTTGTC-  43

seq1  CAGCTCCAAACTTTGTCTCTTAAAGGTACCTATGAGCATAATCAGGTCTG  100
      ||||||| ||||| ||||||  || ||||||||||||||||||| |||||
seq2  CAGCTCC-AACTTGGTCTCT--AAAGTACCTATGAGCATAATCA-GTCTG  89

seq1  TTGAACTTAAATTGTAACTAACTGATTTTAGTTGAAGTACAGAAATGATG  150
      |   |||  |||||| ||| ||||| ||||||   ||||||| |||||||
seq2  T--GACT--AATTGT-ACT-ACTGA-TTTAGT--GAGTACAG-AATGATG  129

seq1  TAAGTGTGTCTAACACTGAGAAGAAACCAGGACAGTGAGCATTTTAAATT  200
      ||||| ||||| |||||||||||||||   ||||| ||||| ||||||||
seq2  TAAGT-TGTCT-ACACTGAGAAGAAAC--AGACAGGGAGCA-TTTAAATT  174

seq1  GAGGGCAATGTAGTAAAGATAAAGATACAAAGGCAAGTACATGTGTGTCC  250
      ||||   |||||||||||||||||||||||| ||||||||| ||||||||
seq2  GAGG--CATGTAGTAAAGATAAAGATACAAAAGCAAGTACA-GTGTGTCC  221

seq1  AGAAACATGAGAACAC-AGATGTG-CACACACA-CACAC-ACATGTGCAT  296
      || ||||||||||||| ||||||| ||  |||| ||||| ||||||||| 
seq2  AG-AACATGAGAACACAAGATGTGCCAACCACACCACACAACATGTGCAA  270

seq1  ATATCATGCATGTACA-CATAAATGCTTGTAGGAGTTCTTTACGATGGCA  345
       | |||||||| |||| |||||||||||||||||||||||||||||||||
seq2  TTTTCATGCAT-TACACCATAAATGCTTGTAGGAGTTCTTTACGATGGCA  319

seq1  GTGA-TATGAGGCTTAAGAGTTACTTTATACATACAAGTATAAAGAGAAA  394
      |||| |||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTGATTATGAGGCTTAAGAGTTACTTTATACATAC-AGTATAAAGAGAAA  368

seq1  AAATAGTGTAGATTCAAATTCTTTATTTTGTAGTTAAAATTAGAATTGGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGTAGATTCAAATTCTTTATTTTGTAGTTAAAATTAGAATTGGA  418

seq1  TACTTCCTGGATTTGAATTTTTGTCCCTTGCATTATTAAGCACTTTTAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTGGATTTGAATTTTTGTCCCTTGCATTATTAAGCACTTTTAGT  468

seq1  TTTATACAACTTATTTATCATTCTCTGAGACTGAGCTCTCAGAGTGCATT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACAACTTATTTATCATTCTCTGAGACTGAGCTCTCAGAGTGCATT  518

seq1  GTTTGTAAATGTTAAATTAATTGTCAAAAATAAATTGCTTCAGAATAATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAAATGTTAAATTAATTGTCAAAAATAAATTGCTTCAGAATAATT  568

seq1  AAGTTTGCTCCATTTTTGCCACTGAATTTCCTTTAGACAGGAAAAAATCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGCTCCATTTTTGCCACTGAATTTCCTTTAGACAGGAAAAAATCT  618

seq1  GGGCCAAAGTTTTTCAAGATGGTCAGGTGGCCCCATGCCTCAAATGGGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAAGTTTTTCAAGATGGTCAGGTGGCCCCATGCCTCAAATGGGGA  668

seq1  ACATGTCTATCTACTGGAGACTGTCTCTTCAGGTTCCACCTTCCCAAGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTATCTACTGGAGACTGTCTCTTCAGGTTCCACCTTCCCAAGCA  718

seq1  GGATGAGGTGAGAGTGAGAGCACACTCTTAGAAACAAATGGGAGGTCAGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGGTGAGAGTGAGAGCACACTCTTAGAAACAAATGGGAGGTCAGA  768

seq1  TGAGGTGAAGAACTCATGGAAGGGGAACGAGAAAGGGCAGCAACATTTGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGAAGAACTCATGGAAGGGGAACGAGAAAGGGCAGCAACATTTGT  818

seq1  AATTTAAATAAATAAAATAACTAATAAAAATAATGCAATAAATAAATAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATAAATAAAATAACTAATAAAAATAATGCAATAAATAAATAAA  868

seq1  TAAATATTATTTCTTTTTTCAGGGACCTGAAGTTCTTTTCATACAGATCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTATTTCTTTTTTCAGGGACCTGAAGTTCTTTTCATACAGATCT  918

seq1  TTCCCTTGCTTTATAAGAGTCGCACCAAGATATTTTATAGTATTTGTGAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGCTTTATAAGAGTCGCACCAAGATATTTTATAGTATTTGTGAC  968

seq1  TATTGTGAATTGTGTTGTTGCCGTAATTTCTTTCTCACGCTGATTGGCAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGAATTGTGTTGTTGCCGTAATTTCTTTCTCACGCTGATTGGCAT  1018

seq1  TTGTATAAAGGAAGGTAATTATTGATTTGTTTAAGTTAATTTTATACCCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAAGGAAGGTAATTATTGATTTGTTTAAGTTAATTTTATACCCA  1068