BAC Information

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BAC

Clone NameB6Ng01-047G10
Chromosome4 (Build37)
Map Location 113,397,155 - 113,515,605
singlet/doubletdoublet
Overlap geneLOC242627
Upstream geneA030001H23Rik, LOC433745, LOC545668, LOC230622, LOC100040607
Downstream geneLOC100040625, A630098G03Rik, LOC666048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047G10.bB6Ng01-047G10.g
ACCDH872272DH872273
length4971,007
definitionDH872272|Mus musculus domesticus DNA, BAC clone: B6Ng01-047G10, 5' end.DH872273|Mus musculus domesticus DNA, BAC clone: B6Ng01-047G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,515,109 - 113,515,605)(113,397,155 - 113,398,183)
sequence
gaattctttgcttagctctgagccccatttttagtggggttatttgattt
tatggtgtccaccttcttgagctctttatatatatatattggatatttag
accctatctgatttagtataggtaaagatcctttcccaatctgttggtgg
tctttttgtcttattgacagtgtcttttaccttacagaaactttgcaatt
ttatgaggtcccatttgtccattctcgatcttacaagacaagccattgct
attatattcaggaatttcccccctgtgcccatatcttcgaagcttttccc
cactttctccactataagtttcactgtctatagtttttttttttaattga
tggtgtattttattttattttattttattttgatttttattaggtattta
gctcacttacatttccaatgctataccaaaagtcctccataccaacacac
cccgactcccctaccaattcactccccctaataggccctggctttcc
gaattctctagacaacttataaacagcccttgtatcttgggcactgacct
gctctgctattacacaataatttttatgcctatcctttttttcccctatt
gttctccaatctctgataactaaaaggaaacacgcctggaaatagttaag
agtccccaatgtttgtgagtcagtccatccatatggatgcctttatactg
ccttagtccatgttgaataaatggacatgttaatgtctctcaagttctgt
ggtacccacattttcccaagaatttccattttcttttgtgtcctgagtct
tgtattgagtaattcccttttaatttaaaatcttctgaacttcaacattt
gagatacagtgtattccctaaacatcatacctttcgttgcctttccaata
ctgatccttacatgcatactagatccaaatatcgagcactgttaccctct
attcttattccttctaatttgaatactttttgaacatggattactaagtt
ttattccaaaagagtgctccttttcaactgctaaatatttccctccttcc
atacttctgaaattataagctaacatcttctccatcatttttccttcaaa
gacttgatcagtattgtgcatagcataatcacatattgtttgacttttta
tttcgttttaaatacatccttctctcctgtgggaaacttccttgtgggaa
taacaacaacctcctttaatggcttatcctcaacagtgaaggcataaagc
tgcttaccataatttcttctaatttgtgaatcatgatggactagcaatta
tttaatagatagtgagcaatgcatgtgagatgcatctccatattactgaa
cagttatcattcagcaagagcatttggcctgaagctatgtgagaagatgc
acactcaaaacatctacatacgtcactactctgaatatatcatctcagta
catgatcatactcatcaccgactgcatgcaacttagttaagaaaagagcc
cttcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_113515109_113515605
seq2: B6Ng01-047G10.b_41_537 (reverse)

seq1  GGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAGTCGGGGTG  50
      |||| ||||||||| |  ||||||||||  | ||||||||||||||||||
seq2  GGAAAGCCAGGGCCTATTAGGGGGAGTGAATTGGTAGGGGAGTCGGGGTG  50

seq1  GGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAGTGAGCTAA  100
       || ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTATGGAGGACTTTTGGTATAGCATTGGAAATGTAAGTGAGCTAA  100

seq1  ATACCTAATAAAAATCAAAATAAAATAAAATAAAATAAAATACACCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAATAAAAATCAAAATAAAATAAAATAAAATAAAATACACCATCA  150

seq1  ATTAAAAAAAAAAACTATAGACAGTGAAACTTATAGTGGAGAAAGTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAAAAAACTATAGACAGTGAAACTTATAGTGGAGAAAGTGGGG  200

seq1  AAAAGCTTCGAAGATATGGGCACAGGGGGGAAATTCCTGAATATAATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTCGAAGATATGGGCACAGGGGGGAAATTCCTGAATATAATAGC  250

seq1  AATGGCTTGTCCTGTAAGATCGAGAATGGACAAATGGGACCTCATAAAAT  300
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTGTCTTGTAAGATCGAGAATGGACAAATGGGACCTCATAAAAT  300

seq1  TGCAAAGTTTCTGTAAGGTAAAAGACACTGTCAATAAGACAAAAAGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTTTCTGTAAGGTAAAAGACACTGTCAATAAGACAAAAAGACCA  350

seq1  CCAACAGATTGGGAAAGGATCTTTACCTATACTAAATCAGATAGGGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGATTGGGAAAGGATCTTTACCTATACTAAATCAGATAGGGTCTA  400

seq1  AATATCCAATATATATATATAAAGAGCTCAAGAAGGTGGACACCATAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAATATATATATATAAAGAGCTCAAGAAGGTGGACACCATAAAA  450

seq1  TCAAATAACCCCACTAAAAATGGGGCTCAGAGCTAAGCAAAGAATTC  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAACCCCACTAAAAATGGGGCTCAGAGCTAAGCAAAGAATTC  497

seq1: chr4_113397155_113398183
seq2: B6Ng01-047G10.g_65_1071

seq1  GAATTCTCTAAACAACTTATAAACAGCCCTTGTATCTTGGGCACTGACCT  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGACAACTTATAAACAGCCCTTGTATCTTGGGCACTGACCT  50

seq1  GCTCTGCTATTACACAATAATTTTTATGCCTATCCTTTTTTTCCCCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTATTACACAATAATTTTTATGCCTATCCTTTTTTTCCCCTATT  100

seq1  GTTCTCCAATCTCTGATAACTAAAAGGAAACACGCCTGGAAATAGTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAATCTCTGATAACTAAAAGGAAACACGCCTGGAAATAGTTAAG  150

seq1  AGTCCCCAATGTTTGTGAGTCAGTCCATCCATATGGATGCCTTTATACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCAATGTTTGTGAGTCAGTCCATCCATATGGATGCCTTTATACTG  200

seq1  CCTTAGTCCATGTTGAATAAATGGACATGTTAATGTCTCTCAAGTTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTCCATGTTGAATAAATGGACATGTTAATGTCTCTCAAGTTCTGT  250

seq1  GGTACCCACATTTTCCCAAGAATTTCCATTTTCTTTTGTGTCCTGAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCCACATTTTCCCAAGAATTTCCATTTTCTTTTGTGTCCTGAGTCT  300

seq1  TGTATTGAGTAATTCCCTTTTAATTTAAAATCTTCTGAACTTCAACATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGAGTAATTCCCTTTTAATTTAAAATCTTCTGAACTTCAACATTT  350

seq1  GAGATACAGTGTATTCCCTAAACATCATACCTTTCGTTGCCTTTCCAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAGTGTATTCCCTAAACATCATACCTTTCGTTGCCTTTCCAATA  400

seq1  CTGATCCTTACATGCATACTAGATCCAAATATCGAGCACTGTTACCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCTTACATGCATACTAGATCCAAATATCGAGCACTGTTACCCTCT  450

seq1  ATTCTTATTCCTTCTAATTTGAATACTTTTTGAACATGGATTACTAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATTCCTTCTAATTTGAATACTTTTTGAACATGGATTACTAAGTT  500

seq1  TTATTCCAAAGGAGTGCTCCTTTTCAACTGCTAAATATTTCCCTCCTTCC  550
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCAAAAGAGTGCTCCTTTTCAACTGCTAAATATTTCCCTCCTTCC  550

seq1  ATACTTCTGAAATTATAAGCTAACATCTTCTCCATCATTTTTCCTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTGAAATTATAAGCTAACATCTTCTCCATCATTTTTCCTTCAAA  600

seq1  GACTTGATCAGTATTGTGCATAGCAGAATCACATATTGTTTGAC-TTTTA  649
      ||||||||||||||||||||||||| |||||||||||||||||| |||||
seq2  GACTTGATCAGTATTGTGCATAGCATAATCACATATTGTTTGACTTTTTA  650

seq1  TTTCGTTTTAAATTCATCCTTCTCTCCTGTGGGAAACTTCCTTGTGGGAA  699
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTTTAAATACATCCTTCTCTCCTGTGGGAAACTTCCTTGTGGGAA  700

seq1  TAACAACAAACCTCCTTTAAATGGCTTATCCTCAACAGTGAAGGCATAAA  749
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  TAACAAC-AACCTCCTTT-AATGGCTTATCCTCAACAGTGAAGGCATAAA  748

seq1  GCTGCTTACCATAGTTTCTTCTAATTTGTGAATCATGATGGACTTGCAAT  799
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  GCTGCTTACCATAATTTCTTCTAATTTGTGAATCATGATGGACTAGCAAT  798

seq1  TATTTAAATAGATAGTGAGCAATGCATTTGAAATGCATCTCCATATTTCT  849
      ||||| ||||||||||||||||||||| ||| ||||||||||||||| ||
seq2  TATTT-AATAGATAGTGAGCAATGCATGTGAGATGCATCTCCATATTACT  847

seq1  GAAACAGTTATCATTCAGCAAGGAGGCATTTGGCCTGAAGCTATGTGAAG  899
      | ||||||||||||||||||||   |||||||||||||||||||||||  
seq2  G-AACAGTTATCATTCAGCAAG--AGCATTTGGCCTGAAGCTATGTGA--  892

seq1  AAAGATTGCCACACTCAAAACATCCTTACATAAGGTCACCTAACTCTGAG  949
       |||||   |||||||||||||||  ||||| | |||||   ||||||| 
seq2  GAAGAT--GCACACTCAAAACATC--TACAT-ACGTCAC--TACTCTGA-  934

seq1  ATATATCATCCTTCATTACATGATTCATAACTCATCACCGACTGCATGCA  999
      ||||||||||  ||| ||||||| |||| |||||||||||||||||||||
seq2  ATATATCATC--TCAGTACATGA-TCAT-ACTCATCACCGACTGCATGCA  980

seq1  ACTTATGTTATAGAAAAGAGGCACTTCTTT  1029
      ||||| |||| |||||||| || |||||||
seq2  ACTTA-GTTA-AGAAAAGA-GCCCTTCTTT  1007