BAC Information

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BAC

Clone NameB6Ng01-052L18
Chromosome4 (Build37)
Map Location 137,546,027 - 137,694,432
singlet/doubletdoublet
Overlap geneLOC100040558, Eif4g3
Upstream geneZbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2, Ece1
Downstream geneHp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052L18.bB6Ng01-052L18.g
ACCDH875999DH876000
length1,073991
definitionDH875999|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L18, 5' end.DH876000|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,693,357 - 137,694,432)(137,546,027 - 137,547,014)
sequence
gaattctctgggagttcccaccctagacacctgggcttccccctcctctt
cccatagggcttctgttcacatgaggtctcttctcagcccctgcccttca
gttggcactataccagcgtcctcacattcccaggcctcgactgggttcct
tttggctgcggacacacccttgacattttggttttttcactttagaaatt
cccataggaatctagaaaagaaaagctgtcaatttctctaggaaacaagg
aaaagctgagagaagagaactacaatggagtctgtggggcgacggtgcgc
acctttgattccagtactcgaggggcagaggcagatggctggctgcaagt
tctaggctggcctggtcaacacagcaaattccacgacaaccagggctaca
aggtaagaccttaccaaaaccaaacaaaaccaacaagccccccaaaccac
caaccaaatcaaccacacacacagtgaagccatgaatgagcctcgagaat
caggccagagaaccaggccgacgacgtcgacgcacggatgatggatcact
gggaaagacagagagaagaagctaccggactcggctgaaaggcaggactt
ctgctctcccaaaagcagccaagtaagcacactgagttttccctcgttgc
ttcaccgttactgctcacagggctgtcggacgatggcatccgagggagct
cggttggtacttgcactaacggccttcagtttacattttacttctaatct
tagcgtaatttcccctatcatttgagtttaatttactttttcttttaatt
gtttctgaaggtggatgctgaggccaacagaatgaagatactttaacaat
atattcattaagtggttttaatttccatattatattcacctttgcagtgt
gctatgcacaataaatctttcgcccaaaatgttcattatgacattgaccc
tatgactcaaacctttgtgtgcaagtgccctttgattatgtggtaaatga
gtatctttggatgaataggaaactagacaccatgtaatcaaaggcctttt
ggggtgggagcgggggggggggg
gaattcctccttctactaccaaatgccttcaagatttagcctaaatccaa
gatcctttaataaaccaggctctttttttttttcctttctttcttccttt
ttgagacagggtttctctgttttagctctggctgtcctggaactcactat
atggaccagggtgatctcaaattcacagagatctgcctgtctctgctgga
attaaaggcatgcatcactgtggcccagctctggggctcttcttttaacc
ttagtagccactttaatctcttggcaactaagctctcaccacacacactg
gcctgcttctgctaccttcattccacgagtggggcctggggagtcttagg
ccatcaggcctgacagcaggggctttcacctattaagctgttttgacacc
atcatggagagcttagtggacaaggtgctgaaatcagatatttaaatgtt
tttatgtataagggtgttttacctattatctgtgcatgtacgtgtctagt
tcccaaggaggccaggagagggcatcatatcccttggaactggagtttca
aaggcgtgagctgccccgtggactgggaattgaacaggggtcctctggga
gagcagccagtattcataacctgtgagccttctcttcagccccagatcag
attttcttgccagtgtctatgtttgatgatagggttgctatgctgagggc
aaggtgtctgaaaggtcctttgggttcgaagcccaggccttcctcttaga
tgtcatacagattgcctttggatgtccttgagtcttaagttctttgtggg
tgaatgaggtgtaccacgaattttccagtgctgtcaggggggatgagtta
acctatgaaaagtggtctacacatagtaggtgtttagtttttgctgctct
gtaggatgtgggttgtgtctagaaggtcggatttctgtactcaaattcag
tgtaaggtgagccactcaaccgtgactgcagggtcagcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137693357_137694432
seq2: B6Ng01-052L18.b_45_1117 (reverse)

seq1  CCCCCCCCCCCCGCTCCCAACCCCAAAAGGCCTTTTGATTACATGGTGTC  50
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  CCCCCCCCCCCCGCTCCC-ACCCCAAAAGGCC-TTTGATTACATGGTGTC  48

seq1  TAGTTTCCTATTCATCCAAAGATACTTCATTTTACCACATAATC-AAGGG  99
      ||||||||||||||||||||||||| ||| |||||||||||||| |||||
seq2  TAGTTTCCTATTCATCCAAAGATAC-TCA-TTTACCACATAATCAAAGGG  96

seq1  CACTTTGCCACACAAAGGTTTGAGTCATAGGGGTCAATGTCAT-ATGAAC  148
      |||||   ||||||||||||||||||||| ||||||||||||| ||||||
seq2  CACTT--GCACACAAAGGTTTGAGTCATA-GGGTCAATGTCATAATGAAC  143

seq1  ATTTTGGGCG-AAGATTTATTGTGCATAGCACACTGCAAAGGTGATATTA  197
      |||||||||| ||||||||||||||||||||||||||||||||||   ||
seq2  ATTTTGGGCGAAAGATTTATTGTGCATAGCACACTGCAAAGGTGAATATA  193

seq1  ATATGGAAATTAAAACCACTAATTGAATATATTGTTAAAGTATCTTCATT  247
      |||||||||||||||||||| | |||||||||||||||||||||||||||
seq2  ATATGGAAATTAAAACCACTTAATGAATATATTGTTAAAGTATCTTCATT  243

seq1  CTGTTGGCCTCAGCATCCACCTTCAGAAACAATTAAAAG-AAAAGTAAAT  296
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGTTGGCCTCAGCATCCACCTTCAGAAACAATTAAAAGAAAAAGTAAAT  293

seq1  TAAACTCAAATGATAGGGGAAATTACGCTAAGATTAGAAGTAAAATGTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAAATGATAGGGGAAATTACGCTAAGATTAGAAGTAAAATGTAA  343

seq1  ACTGAAGGCCGTTAGTGCAAGTACCAACCGAGCTCCCTCGGATGCCATCG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGGCCGTTAGTGCAAGTACCAACCGAGCTCCCTCGGATGCCATCG  393

seq1  TCCGACAGCCCTGTGAGCAGTAACGGTGAAGCAACGAGGGAAAACTCAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACAGCCCTGTGAGCAGTAACGGTGAAGCAACGAGGGAAAACTCAGT  443

seq1  GTGCTTACTTGGCTGCTTTTGGGAGAGCAGAAGTCCTGCCTTTCAGCCGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTACTTGGCTGCTTTTGGGAGAGCAGAAGTCCTGCCTTTCAGCCGA  493

seq1  GTCCGGTAGCTTCTTCTCTCTGTCTTTCCCAGTGATCCATCATCCGTGCG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGGTAGCTTCTTCTCTCTGTCTTTCCCAGTGATCCATCATCCGTGCG  543

seq1  TCGACGTCGTCGGCCTGGTTCTCTGGCCTGATTCTCGAGGCTCATTCATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACGTCGTCGGCCTGGTTCTCTGGCCTGATTCTCGAGGCTCATTCATG  593

seq1  GCTTCACTGTGTGTGTGGTTGATTTGGTTGGTGGTTTGGGGGGCTTGTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACTGTGTGTGTGGTTGATTTGGTTGGTGGTTTGGGGGGCTTGTTG  643

seq1  GTTTTGTTTGGTTTTGGTAAGGTCTTACCTTGTAGCCCTGGTTGTCGTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTGGTTTTGGTAAGGTCTTACCTTGTAGCCCTGGTTGTCGTGG  693

seq1  AATTTGCTGTGTTGACCAGGCCAGCCTAGAACTTGCAGCCAGCCATCTGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTGTGTTGACCAGGCCAGCCTAGAACTTGCAGCCAGCCATCTGC  743

seq1  CTCTGCCCCTCGAGTACTGGAATCAAAGGTGCGCACCGTCGCCCCACAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCCTCGAGTACTGGAATCAAAGGTGCGCACCGTCGCCCCACAGA  793

seq1  CTCCATTGTAGTTCTCTTCTCTCAGCTTTTCCTTGTTTCCTAGAGAAATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGTAGTTCTCTTCTCTCAGCTTTTCCTTGTTTCCTAGAGAAATT  843

seq1  GACAGCTTTTCTTTTCTAGATTCCTATGGGAATTTCTAAAGTGAAAAAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTTTTCTTTTCTAGATTCCTATGGGAATTTCTAAAGTGAAAAAAC  893

seq1  CAAAATGTCAAGGGTGTGTCCGCAGCCAAAAGGAACCCAGTCGAGGCCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTCAAGGGTGTGTCCGCAGCCAAAAGGAACCCAGTCGAGGCCTG  943

seq1  GGAATGTGAGGACGCTGGTATAGTGCCAACTGAAGGGCAGGGGCTGAGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGAGGACGCTGGTATAGTGCCAACTGAAGGGCAGGGGCTGAGAA  993

seq1  GAGACCTCATGTGAACAGAAGCCCTATGGGAAGAGGAGGGGGAAGCCCAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTCATGTGAACAGAAGCCCTATGGGAAGAGGAGGGGGAAGCCCAG  1043

seq1  GTGTCTAGGGTGGGAACTCCCAGAGAATTC  1076
      ||||||||||||||||||||||||||||||
seq2  GTGTCTAGGGTGGGAACTCCCAGAGAATTC  1073

seq1: chr4_137546027_137547014
seq2: B6Ng01-052L18.g_69_1059

seq1  GAATTCCTCCTTCTACTACCAAATGCCTTCAAGATTTAGCCTAAATCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTCTACTACCAAATGCCTTCAAGATTTAGCCTAAATCCAA  50

seq1  GATCCTTTAATAAACCAGGCTCTTTTTTTTTTTCCTTTCTTTCTTCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTTAATAAACCAGGCTCTTTTTTTTTTTCCTTTCTTTCTTCCTTT  100

seq1  TTGAGACAGGGTTTCTCTGTTTTAGCTCTGGCTGTCCTGGAACTCACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAGGGTTTCTCTGTTTTAGCTCTGGCTGTCCTGGAACTCACTAT  150

seq1  ATGGACCAGGGTGATCTCAAATTCACAGAGATCTGCCTGTCTCTGCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCAGGGTGATCTCAAATTCACAGAGATCTGCCTGTCTCTGCTGGA  200

seq1  ATTAAAGGCATGCATCACTGTGGCCCAGCTCTGGGGCTCTTCTTTTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGCATGCATCACTGTGGCCCAGCTCTGGGGCTCTTCTTTTAACC  250

seq1  TTAGTAGCCACTTTAATCTCTTGGCAACTAAGCTCTCACCACACACACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGCCACTTTAATCTCTTGGCAACTAAGCTCTCACCACACACACTG  300

seq1  GCCTGCTTCTGCTACCTTCATTCCACGAGTGGGGCCTGGGGAGTCTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTCTGCTACCTTCATTCCACGAGTGGGGCCTGGGGAGTCTTAGG  350

seq1  CCATCAGGCCTGACAGCAGGGGCTTTCACCTATTAAGCTGTTTTGACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGGCCTGACAGCAGGGGCTTTCACCTATTAAGCTGTTTTGACACC  400

seq1  ATCATGGAGAGCTTAGTGGACAAGGTGCTGAAATCAGATATTTAAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGAGAGCTTAGTGGACAAGGTGCTGAAATCAGATATTTAAATGTT  450

seq1  TTTATGTATAAGGGTGTTTTACCTATTATCTGTGCATGTACGTGTCTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATAAGGGTGTTTTACCTATTATCTGTGCATGTACGTGTCTAGT  500

seq1  TCCCAAGGAGGCCAGGAGAGGGCATCATATCCCTTGGAACTGGAGTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGAGGCCAGGAGAGGGCATCATATCCCTTGGAACTGGAGTTTCA  550

seq1  AAGGCGTGAGCTGCCCCGTGGACTGGGAATTGAACAGGGGTCCTCTGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGTGAGCTGCCCCGTGGACTGGGAATTGAACAGGGGTCCTCTGGGA  600

seq1  GAGCAGCCAGTATTCATAACCTGTGAGCCTTCTCTTCAGCCCCAGATCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCAGTATTCATAACCTGTGAGCCTTCTCTTCAGCCCCAGATCAG  650

seq1  ATTTTCTTGCCAGTGTCTATGTTTGATGATAGGGTTGCTATGCTGAGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTGCCAGTGTCTATGTTTGATGATAGGGTTGCTATGCTGAGGGC  700

seq1  AAGGTGTCTGAAAGGTCC-TTGGGTTCGAAGCCCAGGCCTTCCTCTTAGA  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGGTGTCTGAAAGGTCCTTTGGGTTCGAAGCCCAGGCCTTCCTCTTAGA  750

seq1  TGTCATACAGATTGCCTTTGGATGTCCTTGAGTCTTAAGTTCTTTGTGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATACAGATTGCCTTTGGATGTCCTTGAGTCTTAAGTTCTTTGTGGG  800

seq1  TGAATGAGGTGTACCACGAATTTTCCAGTGCTGTCAGGGGGGATGAGTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGGTGTACCACGAATTTTCCAGTGCTGTCAGGGGGGATGAGTTA  850

seq1  ACCTATGAAAGGT-GTCTACACATAGTAGGTGTTTAGTGTTTGCTGCTCT  898
      |||||||||| || |||||||||||||||||||||||| |||||||||||
seq2  ACCTATGAAAAGTGGTCTACACATAGTAGGTGTTTAGTTTTTGCTGCTCT  900

seq1  GTAGGATGTGGG-TGTGTCTAGAAGGGTCGGATTTCTGTACTCAAATACA  947
      |||||||||||| ||||||||||| |||||||||||||||||||||| | 
seq2  GTAGGATGTGGGTTGTGTCTAGAA-GGTCGGATTTCTGTACTCAAATTC-  948

seq1  AGTGT-AGGTGAG-CACTCAACCGTGACTGCAGGGTCAGCTTT  988
      ||||| ||||||| |||||||||||||||||||||||||||||
seq2  AGTGTAAGGTGAGCCACTCAACCGTGACTGCAGGGTCAGCTTT  991