BAC Information

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BAC

Clone NameB6Ng01-054F03
Chromosome4 (Build37)
Map Location 85,650,268 - 85,651,463
singlet/doubletsinglet
Overlap geneLOC668052
Upstream geneD530005L17Rik, LOC100040303, Sh3gl2, A930009N24
Downstream geneAdamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054F03.bB6Ng01-054F03.g
ACCDH877093DH877094
length1,176251
definitionDH877093|Mus musculus domesticus DNA, BAC clone: B6Ng01-054F03, 5' end.DH877094|Mus musculus domesticus DNA, BAC clone: B6Ng01-054F03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccatatcctcaatgtggcggtagctaagcatgtcatatgacc
tatatctgttaaatgtgcaataaaattggcaacttataaccacatccgga
tcatcttcatttcatttttcccaagtctcctatcaaatctctctggtgat
tttattcagttacaagtgtaccgtgaccaacctattgaataatgtctttg
acttttccttgaaaggggaaagtatactttgcatgcttgctgatggtctc
tgagtttttggtgaggttcctggagttcctaggcacatcccaagaggccc
attctctccatctgcttcttcagtgtctcctgttagcacttcatctatct
tacagaatccgcttcatttagatcaggaaaggcatgtggtctcctctctg
aataatttaatctgtgcatcggggtcacttcgacaagctttcctttttgt
catttttattggtttgttatgagtcttcatttcatgacatggctcccaca
tcccgcactttctacccacattgaatgtcctgtatgtcctgtattctatc
cgtttcgtcattgtggtcccttatttcttgggaccattttgcatcatctt
cctagcacccagaatgtcttagctggttcttaactactcacccttcaagc
tgtctgtaggtattctcagaggtggcagatctgtccttactgttcctaca
gtatgtggtgtggctgccacttgagccactatcacattgctcagaaactt
attgctattttttcccaacatcccatacctaaaacaaaacaaaaaaaaaa
aactcttgtgaaaaaggtttttttcttcaccctttctatgtcctcagtcc
ccatgtcttagtcatatacagaacagaacataattaatggctgttgagtg
actctatacagcatcttaccatctactgtctttcttgtggttggcaacag
cactgagttgttgagcaatcatagaggcttctgggggaccccacttgttt
tctagacttcagtgtgttctgtgtgtaagcttttgtataggatgtggtgg
taagacaatttcttaatcctttctcctcctgaaatctctttattaatttt
caagctgtttgctatgactacaggtccaggaatatttcatgtgtagaact
agctgccttcagcctaaaaggtttat
atattgtcttgaaattcttgttgggcaggagctcttctttttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttcttcttcttcttctcctcctcctc
ctccaccacctccaccatcggagttgtccacgacgaagactacgactgct
gcctctttcttggtttttctgtgttagttgacgactattttttgttgttg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85650268_85651463
seq2: B6Ng01-054F03.b_41_1216

seq1  GAATTCTTCCATATCCTCAATGTGGCGGTAGCTAAGCATGTCATATGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCATATCCTCAATGTGGCGGTAGCTAAGCATGTCATATGACC  50

seq1  TATATCTGTTAAATGTGCAATAAAATTGGCAACTTATAACCACATCCGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGTTAAATGTGCAATAAAATTGGCAACTTATAACCACATCCGGA  100

seq1  TCATCTTCATTTCATTTTTCCCAAGTCTCCTATCAAATCTCTCTGGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCATTTCATTTTTCCCAAGTCTCCTATCAAATCTCTCTGGTGAT  150

seq1  TTTATTCAGTTACAAGTGTACCGTGACCAACCTATTGAATAATGTCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGTTACAAGTGTACCGTGACCAACCTATTGAATAATGTCTTTG  200

seq1  ACTTTTCCTTGAAAGGGGAAAGTATACTTTGCATGCTTGCTGATGGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCCTTGAAAGGGGAAAGTATACTTTGCATGCTTGCTGATGGTCTC  250

seq1  TGAGTTTTTGGTGAGGTTCCTGGAGTTCCTAGGCACATCCCAAGAGGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTTGGTGAGGTTCCTGGAGTTCCTAGGCACATCCCAAGAGGCCC  300

seq1  ATTCTCTCCATCTGCTTCTTCAGTGTCTCCTGTTAGCACTTCATCTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCCATCTGCTTCTTCAGTGTCTCCTGTTAGCACTTCATCTATCT  350

seq1  TACAGAATCCGCTTCATTTAGATCAGGAAAGGCATGTGGTCTCCTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATCCGCTTCATTTAGATCAGGAAAGGCATGTGGTCTCCTCTCTG  400

seq1  AATAATTTAATCTGTGCATCGGGGTCACTTCGACAAGCTTTCCTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTAATCTGTGCATCGGGGTCACTTCGACAAGCTTTCCTTTTTGT  450

seq1  CATTTTTATTGGTTTGTTATGAGTCTTCATTTCATGACATGGCTCCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATTGGTTTGTTATGAGTCTTCATTTCATGACATGGCTCCCACA  500

seq1  TCCCGCACTTTCTACCCACATTGAATGTCCTGTATGTCCTGTATTCTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCACTTTCTACCCACATTGAATGTCCTGTATGTCCTGTATTCTATC  550

seq1  CGTTTCGTCATTGTGGTCCCTTATTTCTTGGGACCATTTTGCATCATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCGTCATTGTGGTCCCTTATTTCTTGGGACCATTTTGCATCATCTT  600

seq1  CCTAGCACCCAGAATGTCTTAGCTGGTTCTTAACTACTCACCCTTCAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCACCCAGAATGTCTTAGCTGGTTCTTAACTACTCACCCTTCAAGC  650

seq1  TGTCTGTAGGTATTCTCAGAGGTGGCAGATCTGTCCTTACTGTTCCTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAGGTATTCTCAGAGGTGGCAGATCTGTCCTTACTGTTCCTACA  700

seq1  GTATGTGGTGTGGCTGCCACTTGAGCCACTATCACATTGCTCAGAAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGTGTGGCTGCCACTTGAGCCACTATCACATTGCTCAGAAACTT  750

seq1  ATTGCTATTTTTTCCCAACATCCCATACCTAAAACAAAACAAAAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATTTTTTCCCAACATCCCATACCTAAAACAAAACAAAAAAAAAA  800

seq1  AACTCTTGTGAAAAAGGTTTTTTTCTTCACCCTTTCTATGTCCTCAGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGTGAAAAAGGTTTTTTTCTTCACCCTTTCTATGTCCTCAGTCC  850

seq1  CCATGTCTTAGTCATATACAGAACAGAACATAATTAATGGCTGTTGAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTTAGTCATATACAGAACAGAACATAATTAATGGCTGTTGAGTG  900

seq1  ACTCTATACAGCATCTTACCATCTACTGTCTTTCTTGTGGTTGGCAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATACAGCATCTTACCATCTACTGTCTTTCTTGTGGTTGGCAACAG  950

seq1  CACTGAGTTGTTGAGCAATCATAGAGGCTTCTGGGGGACCCCACTTGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGTTGTTGAGCAATCATAGAGGCTTCTGGGGGACCCCACTTGTTT  1000

seq1  TCTAGACTTCAGTGTGTTCTGTGTGTAAGGCTTTTGTATAGGATGTGGTG  1050
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTAGACTTCAGTGTGTTCTGTGTGTAA-GCTTTTGTATAGGATGTGGTG  1049

seq1  TAAGGACAATTTCTTTAATTCCTTTCTCCTTCCTGGAAATCTCTTTAATT  1100
        | |||||||||||  | |||||||||| |||| ||||||||||||  |
seq2  GTAAGACAATTTCTT--AATCCTTTCTCC-TCCT-GAAATCTCTTTA--T  1093

seq1  AAATTTTCCAAAGCTGTTTGCTAGTGACCTACAGGTCCCAGGGGATTATT  1150
       |||||||  ||||||||||||| ||| ||||||||||    ||| ||||
seq2  TAATTTTC--AAGCTGTTTGCTA-TGA-CTACAGGTCC---AGGAATATT  1136

seq1  CCATGTGTAGGAACTAGCCTGGCTTTCAGCCTAAAAAATGGTTTAT  1196
       |||||||| ||||||||   || ||||||||||||   |||||||
seq2  TCATGTGTA-GAACTAGC--TGCCTTCAGCCTAAAA---GGTTTAT  1176