BAC Information

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BAC

Clone NameB6Ng01-062O04
Chromosome4 (Build37)
Map Location 86,044,843 - 86,205,644
singlet/doubletdoublet
Overlap geneAdamtsl1, 4930500O09Rik
Upstream geneA930009N24, LOC668052
Downstream geneRraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062O04.bB6Ng01-062O04.g
ACCDH883143DH883144
length1,110995
definitionDH883143|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O04, 5' end.DH883144|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,204,510 - 86,205,644)(86,044,843 - 86,045,841)
sequence
gaattccagcagctggcagtggtttgctgacttcggtttttagtctgcga
tggaagaaagaactcagagcacacagcagctcagcactgctgcaatccat
gactcttcagacactcgaagctcacactgataacatcaattccagctctc
tggtccacatggtagaaagaggaaaccaacttctccaggttgtcttctga
tctccacatgagtcttggcccacatggctctctttacccagaacctgcga
taagcaaatgtaaaataaaataaaataaaataaaataaataaaagcaaca
aaaagaaacagtaatgtttaagtccaaacattctcctatagtagtagact
gtatggtatgctaccgcacttcttttgcttgcttttgagaaagggagagc
catgtagcccagaacttgcctccttgccccagatgctggaattctagact
tgtgctgccacacccagctcgagagcagaggcccttgactttgttttatt
gtcagagtaagctgctatcttgtgaaaacacaattcccagaatagttgtt
ttcactgctttgaaatagagtgaagtctcactttgtagcccaggctggcc
ttgaccttgcagcaaccctcctgcctcagtctgtgccgggatcacaggct
gaagccatcatgtgctctgactggtggttatttgatacaggagattccag
ggcagaggtctgcagtggttttcaggaccggcttagatattagggaagag
aggtcagaggccacaatagaagctccatagctgcgctccttgaagtgtgg
gctctgggccagcatcagtagcatcattaaaacttgtaagagacacgtgt
tttctggaacccatatttcagaacacaaactcacggtggggtctggcatc
tgatttttgtcagccttgagttctgatgctgctaacatttgagacgtcct
gcttctagcgtcattacctgagcaatagagggctggaccccttcatgctg
ctttgttctcaaagcagagcctgtgggtgaagcattccaagatgcagcag
ccaggttagattccaggaagatctgagtgaatcaggtcaatttggaggtc
gggcatgcat
gaattccaggacagccagggctacacagagaaaccctgttcgaaaccccc
ccccccaaaaagaaaagggtaaatatagtatttaaagtgttagagtggta
tctctgcacatggtgtgtgtgcagttcctttaggctccctattgccccag
cccttcctttcttgaagtagcagagtgaaggaagttgagtcaacttagtg
gccaagtcctagcagcagggataaagaagatgggtggtagattgattcag
gcctcagtcagcctaatttttcattaacttactcctttttcactttctta
gttctttaactctttgcttgttaacttcacttacattttagtcaagttct
ctttgagagtttcagcttatctcagataaattaagcaagaggtccaggcc
actactgagccaaaagggtaaagaaaacatgggctttgggatagttctct
gatggagtcgcctagcctttcagagtcttcctttcctacctagtaaaaga
gggcaacaacctccatctcaggattggttttgagaaccaaaggagataaa
acacagtagatacatttttccaagtttagcagcttcccttttcttaaaag
taaagaatgatcacaaagtagggctcctagaaccctagggggaaaaagcc
aaactcaggagagattccagaccacttgcgaagctctcctggctaagaac
agtttctttcctctcagtccttgcttcacactggagtacagagggtgttt
tctctataagagaaataggatgcagtctgcccgagagaacggcatctgag
aagactttgtgaagagataggagctatgcagcatcataaaggatctatag
aattagatgggccaagaaaacattggtaggaatcggaacacacacatcct
tctcagagagccatgaagatgcaaacaagcaaggacatgttcctgtttag
tcctacactgggtctctggagccttgatgcctttgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86204510_86205644
seq2: B6Ng01-062O04.b_44_1153 (reverse)

seq1  ATGCATGCCCGGACCTCCAGAATATTGACCCTGAATTCCATCTCCAGATC  50
      |||||||||| |||||||   | ||||| |||| ||||  |   ||||||
seq2  ATGCATGCCC-GACCTCC---AAATTGA-CCTG-ATTCACT---CAGATC  41

seq1  TTCCTGGAAAATCTATACCTGGCTGCCTGCATCTTGGAATTGCTTTCAAC  100
      |||||||  |||||| ||||||||| ||||||||||||| ||| |||| |
seq2  TTCCTGG--AATCTA-ACCTGGCTG-CTGCATCTTGGAA-TGC-TTCACC  85

seq1  CACAGGCCTCTGCTTTTGAGAACAAAGCAGCATGAGAGGGTCCAGCCCTC  150
      |||||| |||||| |||||||||||||||||||||  |||||||||||||
seq2  CACAGG-CTCTGC-TTTGAGAACAAAGCAGCATGAAGGGGTCCAGCCCTC  133

seq1  TATTGCTCAGGTAATGACGCCTAGAAGCAGGGACGTCTCAAATGTTAGCA  200
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  TATTGCTCAGGTAATGACG-CTAGAAGCA-GGACGTCTCAAATGTTAGCA  181

seq1  GCATCAGAACCTCAAGGCTTGACAAAAATCAGATTGCCAGACCCCACCCT  250
      ||||||||| |||||||| |||||||||||||| |||||||||||||| |
seq2  GCATCAGAA-CTCAAGGC-TGACAAAAATCAGA-TGCCAGACCCCACCGT  228

seq1  GAGTTTGTTGTTTCTGAAATATGGGTTCCAGAAAACACGTGTCTCTTACA  300
      ||||||||   |||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGT--GTTCTGAAATATGGGTTCCAGAAAACACGTGTCTCTTACA  276

seq1  AGTTTTTAATGATGCTACTGATGCTGGCCCAGAGCCCACACTTCAAGGAG  350
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-TTTTAATGATGCTACTGATGCTGGCCCAGAGCCCACACTTCAAGGAG  325

seq1  CGCAGCTATGGAGCTTCTATTGTGGCCTCTGACCTCTCTTCCCTAATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCTATGGAGCTTCTATTGTGGCCTCTGACCTCTCTTCCCTAATATC  375

seq1  TAAGCCGGTCCTGAAAACCACTGCAGACCTCTGCCCTGGAATCTCCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCGGTCCTGAAAACCACTGCAGACCTCTGCCCTGGAATCTCCTGTA  425

seq1  TCAAATAACCACCAGTCAGAGCACATGATGGCTTCAGCCTGTGATCCCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAACCACCAGTCAGAGCACATGATGGCTTCAGCCTGTGATCCCGG  475

seq1  CACAGACTGAGGCAGGAGGGTTGCTGCAAGGTCAAGGCCAGCCTGGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTGAGGCAGGAGGGTTGCTGCAAGGTCAAGGCCAGCCTGGGCTA  525

seq1  CAAAGTGAGACTTCACTCTATTTCAAAGCAGTGAAAACAACTATTCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGAGACTTCACTCTATTTCAAAGCAGTGAAAACAACTATTCTGGG  575

seq1  AATTGTGTTTTCACAAGATAGCAGCTTACTCTGACAATAAAACAAAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTTTTCACAAGATAGCAGCTTACTCTGACAATAAAACAAAGTCA  625

seq1  AGGGCCTCTGCTCTCGAGCTGGGTGTGGCAGCACAAGTCTAGAATTCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTCTGCTCTCGAGCTGGGTGTGGCAGCACAAGTCTAGAATTCCAG  675

seq1  CATCTGGGGCAAGGAGGCAAGTTCTGGGCTACATGGCTCTCCCTTTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGGCAAGGAGGCAAGTTCTGGGCTACATGGCTCTCCCTTTCTCA  725

seq1  AAAGCAAGCAAAAGAAGTGCGGTAGCATACCATACAGTCTACTACTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGCAAAAGAAGTGCGGTAGCATACCATACAGTCTACTACTATAG  775

seq1  GAGAATGTTTGGACTTAAACATTACTGTTTCTTTTTGTTGCTTTTATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTTTGGACTTAAACATTACTGTTTCTTTTTGTTGCTTTTATTTA  825

seq1  TTTTATTTTATTTTATTTTATTTTACATTTGCTTATCGCAGGTTCTGGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATTTTATTTTATTTTACATTTGCTTATCGCAGGTTCTGGGT  875

seq1  AAAGAGAGCCATGTGGGCCAAGACTCATGTGGAGATCAGAAGACAACCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGCCATGTGGGCCAAGACTCATGTGGAGATCAGAAGACAACCTG  925

seq1  GAGAAGTTGGTTTCCTCTTTCTACCATGTGGACCAGAGAGCTGGAATTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTGGTTTCCTCTTTCTACCATGTGGACCAGAGAGCTGGAATTGA  975

seq1  TGTTATCAGTGTGAGCTTCGAGTGTCTGAAGAGTCATGGATTGCAGCAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCAGTGTGAGCTTCGAGTGTCTGAAGAGTCATGGATTGCAGCAGT  1025

seq1  GCTGAGCTGCTGTGTGCTCTGAGTTCTTTCTTCCATCGCAGACTAAAAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTGCTGTGTGCTCTGAGTTCTTTCTTCCATCGCAGACTAAAAAC  1075

seq1  CGAAGTCAGCAAACCACTGCCAGCTGCTGGAATTC  1135
      |||||||||||||||||||||||||||||||||||
seq2  CGAAGTCAGCAAACCACTGCCAGCTGCTGGAATTC  1110

seq1: chr4_86044843_86045841
seq2: B6Ng01-062O04.g_67_1061

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTTCGAAACCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTTCGAAACCCCC  50

seq1  CCCCCCAAAAAGAAAAGGGTAAATATAGTATTTAAAGTGTTAGAGTGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAAAAAGAAAAGGGTAAATATAGTATTTAAAGTGTTAGAGTGGTA  100

seq1  TCTCTGCACATGGTGTGTGTGCAGTTCCTTTAGGCTCCCTATTGCCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCACATGGTGTGTGTGCAGTTCCTTTAGGCTCCCTATTGCCCCAG  150

seq1  CCCTTCCTTTCTTGAAGTAGCAGAGTGAAGGAAGTTGAGTCAACTTAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTTTCTTGAAGTAGCAGAGTGAAGGAAGTTGAGTCAACTTAGTG  200

seq1  GCCAAGTCCTAGCAGCAGGGATAAAGAAGATGGGTGGTAGATTGATTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTCCTAGCAGCAGGGATAAAGAAGATGGGTGGTAGATTGATTCAG  250

seq1  GCCTCAGTCAGCCTAATTTTTCATTAACTTACTCCTTTTTCACTTTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGTCAGCCTAATTTTTCATTAACTTACTCCTTTTTCACTTTCTTA  300

seq1  GTTCTTTAACTCTTTGCTTGTTAACTTCACTTACATTTTAGTCAAGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTAACTCTTTGCTTGTTAACTTCACTTACATTTTAGTCAAGTTCT  350

seq1  CTTTGAGAGTTTCAGCTTATCTCAGATAAATTAAGCAAGAGGTCCAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGAGTTTCAGCTTATCTCAGATAAATTAAGCAAGAGGTCCAGGCC  400

seq1  ACTACTGAGCCAAAAGGGTAAAGAAAACATGGGCTTTGGGATAGTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGAGCCAAAAGGGTAAAGAAAACATGGGCTTTGGGATAGTTCTCT  450

seq1  GATGGAGTCGCCTAGCCTTTCAGAGTCTTCCTTTCCTACCTAGTAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGTCGCCTAGCCTTTCAGAGTCTTCCTTTCCTACCTAGTAAAAGA  500

seq1  GGGCAACAACCTCCATCTCAGGATTGGTTTTGAGAACCAAAGGAGATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACAACCTCCATCTCAGGATTGGTTTTGAGAACCAAAGGAGATAAA  550

seq1  ACACAGTAGATACATTTTTCCAAGTTTAGCAGCTTCCCTTTTCTTAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTAGATACATTTTTCCAAGTTTAGCAGCTTCCCTTTTCTTAAAAG  600

seq1  TAAAGAATGATCACAAAGTAGGGCTCCTAGAACCCTAGGGGGAAAAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATGATCACAAAGTAGGGCTCCTAGAACCCTAGGGGGAAAAAGCC  650

seq1  AAACTCAGGAGAGATTCCAGACCACTTGCGAAGCTCTCCTGGCTAAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGGAGAGATTCCAGACCACTTGCGAAGCTCTCCTGGCTAAGAAC  700

seq1  AGTTTCTTTCCTCTCAGTCCTTGCTTCACACTGGAGTACAGAGGGTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTTCCTCTCAGTCCTTGCTTCACACTGGAGTACAGAGGGTGTTT  750

seq1  TCTCTATAAGAGAAATAGGATGCAGTCTGCCCGAGAGAACGGCATCTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATAAGAGAAATAGGATGCAGTCTGCCCGAGAGAACGGCATCTGAG  800

seq1  AAGACTTTGTGAAGAGATAGGAGCTATGCAGCATCATAAAGGATCTATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTGTGAAGAGATAGGAGCTATGCAGCATCATAAAGGATCTATAG  850

seq1  AATTAGATGGGCCAAGAAAACATTGGTAGGAATCGGAACCACACACATCC  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATTAGATGGGCCAAGAAAACATTGGTAGGAATCGGAA-CACACACATCC  899

seq1  TTCCCAGAGAGCCATGAAGATGCAAACAAGCAAGGAACATGTTCCTGTTT  950
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTCAGAGAGCCATGAAGATGCAAACAAGCAAGG-ACATGTTCCTGTTT  948

seq1  TAAGTCCTACACTGGGTCTCTGGAGCCTTGATGCCTTTGTGTGTGTGTG  999
        |||||||||||||||||||||||||||||||||||||||||||||||
seq2  --AGTCCTACACTGGGTCTCTGGAGCCTTGATGCCTTTGTGTGTGTGTG  995