BAC Information

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BAC

Clone NameB6Ng01-064P01
Chromosome4 (Build37)
Map Location 18,617,366 - 18,618,545
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064P01.bB6Ng01-064P01.g
ACCDH884579DH884580
length1,1611,160
definitionDH884579|Mus musculus domesticus DNA, BAC clone: B6Ng01-064P01, 5' end.DH884580|Mus musculus domesticus DNA, BAC clone: B6Ng01-064P01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacttgaagttgtgataattgtttatcattatgatgttaacatt
tgttccttgaatgcctatttaccttagaagcaattagaattttcataggg
aaatgtacaatgcaattgtcacaagttaaaatgcaggccattttatttaa
gagtcaaggtctcagattttccatctaattagactatccattcaagtaat
gtgattgataaaagctaactattaaatcatatttattaggtttcattata
tatttggctaaactctgcaaataaatgcatttatagtagcataaaataaa
atcgctattttgtttctgctgtgcagagtcctacaaggccatgaaggtga
tggtgtgacatagttcctgcccctagagcagagccaccagagtatgggcc
tccaccactgttgatggttgctaggcataaggcttgtttgtataataatg
catatattttactttatgttccttcttcgggggatttgtctgccaaggtt
aatgactctataataaacagaaacggtacaagtccagtaagcgagactat
gtctctgtgacactaagacattcaggacagcccataaggctgtggaaaag
atctgtaaagcatgatttcaagaatgcataaatcagcgtaagaactgtcc
tttataggatttgtcaactatgaaaatataagggtgcaatatgaaatgta
tgaggggattaactggtctaaaagaacagaggtagctacactaatgagcc
agcttatcagaaatatattaaggaaacagataaagaaatttagggagtgg
gaatcttatgatgaggtcccacccagctagcttattgtttgtgtttacaa
agacagggagatttccaaattaatttgctatttaaaacaaacaaacaaac
aaacaaaaagtacttgctttctttttctaagactcaagaggcaaaggtca
taaaatgctgattttaggaaatcaaaggggaacctgaggtaatgactgaa
tgatatgtaaataaaagactgggctcctgtttgcaagaaacagctgccag
agagcctatacaacctttttggattgccgggaatgtttttgaattggtaa
gaaatatcaagagttttttctagcaggtttctagtggataccccctcccc
cccaaaaaaaa
gaattcaaggcccagaaatgaatccacacacctatggtcacttgatcttt
gacaaaggagctaaaaccacccagtggaaaaagacagcattttcaataaa
tggtgctggcacagctggtgtttagcatgtagaggaatgtgaattgatcc
attcttaactccttgtacaaagcttaagtcaaagtggatcaaggacctcc
acataaaaccagagatactgaaacttatagatgagtaagtagagaaaagc
cttgaccatatggacacagggaaaatttttctgaacagaacatcaacaat
ggcttgtacagtaagatcaagaattaacaaatgggacctcataaaattgc
aaagcttttgtaaagcaaaggacactgtcaataggataaaaaggcaacca
acagattggaaaaagatctttaccaatcctaaatctgataaaaggctaat
atctaaaatatacaaagaactcagaagtttgactccagaaaaccaaataa
ccctattaaaaatggggtgcagagatagacaaagaattttgaactgagga
ataccaaatggctgagaagcacctaaagatatattcaacatccttaatca
tcagggaaattcaaatcaaaacatccctgaaattccacctcacaccagtc
agaatggctaagaacaaaaacgcaggtgacatcagatgctggtgaggatg
tggagaaagaggaacactactccattgcttggtgggactgtaagcttgta
caaccactctggaaatcagtttggcggttcctcagaaaattgacataata
ctacctaaggacccagcataccactcctgggcatatacccagaagatgtt
ctaactggtaatgagaacacatggtccactaatgttcatagcagacttat
ttttatagcagaagtttgaaattacccaagatgtcctctgaacagagcaa
agaatacagaaatgtggtatttacaaaatagaataactactcagctagta
aacataatatataaaattatttttaaaacattgttgacagtttcacacat
acaagtggtattggcgaattctctctatcttcttcaaaccctcccacatc
ccagcttagtaataatccttctcggctctctattgctttgtgtcctggac
atgaagtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18617366_18618545
seq2: B6Ng01-064P01.b_48_1208

seq1  GAATTCAACTTGAAGTTGTGATAATTGTTTATCATTATGATGTTAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTGAAGTTGTGATAATTGTTTATCATTATGATGTTAACATT  50

seq1  TGTTCCTTGAATGCCTATTTACCTTAGAAGCAATTAGAATTTTCATAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTGAATGCCTATTTACCTTAGAAGCAATTAGAATTTTCATAGGG  100

seq1  AAATGTACAATGCAATTGTCACAAGTTAAAATGCAGGCCATTTTATTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACAATGCAATTGTCACAAGTTAAAATGCAGGCCATTTTATTTAA  150

seq1  GAGTCAAGGTCTCAGATTTTCCATCTAATTAGACTATCCATTCAAGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAGGTCTCAGATTTTCCATCTAATTAGACTATCCATTCAAGTAAT  200

seq1  GTGATTGATAAAAGCTAACTATTAAATCATATTTATTAGGTTTCATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGATAAAAGCTAACTATTAAATCATATTTATTAGGTTTCATTATA  250

seq1  TATTTGGCTAAACTCTGCAAATAAATGCATTTATAGTAGCATAAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCTAAACTCTGCAAATAAATGCATTTATAGTAGCATAAAATAAA  300

seq1  ATCGCTATTTTGTTTCTGCTGTGCAGAGTCCTACAAGGCCATGAAGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCTATTTTGTTTCTGCTGTGCAGAGTCCTACAAGGCCATGAAGGTGA  350

seq1  TGGTGTGACATAGTTCCTGCCCCTAGAGCAGAGCCACCAGAGTATGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGACATAGTTCCTGCCCCTAGAGCAGAGCCACCAGAGTATGGGCC  400

seq1  TCCACCACTGTTGATGGTTGCTAGGCATAAGGCTTGTTTGTATAATAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCACTGTTGATGGTTGCTAGGCATAAGGCTTGTTTGTATAATAATG  450

seq1  CATATATTTTACTTTATGTTCCTTCTTCGGGGGATTTGTCTGCCAAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTTTACTTTATGTTCCTTCTTCGGGGGATTTGTCTGCCAAGGTT  500

seq1  AATGACTCTATAATAAACAGAAACGGTACAAGTCCAGTAAGCGAGACTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCTATAATAAACAGAAACGGTACAAGTCCAGTAAGCGAGACTAT  550

seq1  GTCTCTGTGACACTAAGACATTCAGGACAGCCCATAAGGCTGTGGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTGACACTAAGACATTCAGGACAGCCCATAAGGCTGTGGAAAAG  600

seq1  ATCTGTAAAGCATGATTTCAAGAATGCATAAATCAGCGTAAGAACTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAAGCATGATTTCAAGAATGCATAAATCAGCGTAAGAACTGTCC  650

seq1  TTTATAGGATTTGTCAACTATGAAAATATAAGGGTGCAATATGAAATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGGATTTGTCAACTATGAAAATATAAGGGTGCAATATGAAATGTA  700

seq1  TGAGGGGATTAACTGGTCTAAAAGAACAGAGGTAGCTACACTAATGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGATTAACTGGTCTAAAAGAACAGAGGTAGCTACACTAATGAGCC  750

seq1  AGCTTATCAGAAATATATTAAGGAAACAGATAAAGAAATTTAGGGAGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATCAGAAATATATTAAGGAAACAGATAAAGAAATTTAGGGAGTGG  800

seq1  GAATCTTATGATGAGGTCCCACCCAGCTAGCTTATTGTTTGTGTTTACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTATGATGAGGTCCCACCCAGCTAGCTTATTGTTTGTGTTTACAA  850

seq1  AGACAGGGAGATTTCCAAATTAATTTGCTATTTAAAAACAAACAAACAAA  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGACAGGGAGATTTCCAAATTAATTTGCTATTT-AAAACAAACAAACAAA  899

seq1  CAAACAAAAAGTACTTGCTTTCTTTTTCTAAGACTCAAGAGGCAAAGGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAAGTACTTGCTTTCTTTTTCTAAGACTCAAGAGGCAAAGGTC  949

seq1  ATAAAATGCTGATTTTTAGGAAAATCAAAGGGGAACCTGAGGTAAATGAC  1000
      |||||||||||| ||||||| |||||||||||||||||||||| ||||||
seq2  ATAAAATGCTGA-TTTTAGG-AAATCAAAGGGGAACCTGAGGT-AATGAC  996

seq1  TGAATTGATATGTAAATAAAAGACTGGGCTCCTGTCTGCAAGAGACAAGC  1050
      |||| |||||||||||||||||||||||||||||| ||||||| || |||
seq2  TGAA-TGATATGTAAATAAAAGACTGGGCTCCTGTTTGCAAGAAAC-AGC  1044

seq1  TGCCCAGAGAGCTATTACAACTCTTTTTGGAATTTGTCTGGGAATGTTTT  1100
      || |||||||||   |||||| |||||||||  ||| | |||||||||||
seq2  TG-CCAGAGAGCCTATACAAC-CTTTTTGGA--TTG-CCGGGAATGTTTT  1089

seq1  TGAAATTGGTAAGAAATATCCAAGATTTTTTTTCTAGCAGGTTTTCTGAG  1150
      || |||||||||||||||| |||||  |||||||||||||| ||||| ||
seq2  TG-AATTGGTAAGAAATAT-CAAGA-GTTTTTTCTAGCAGG-TTTCT-AG  1134

seq1  TTTGATTCCCCCCCTCCCCCCAAAAAAAAA  1180
       | |||   |||||||||||| ||||||||
seq2  -TGGAT--ACCCCCTCCCCCCCAAAAAAAA  1161