BAC Information

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BAC

Clone NameB6Ng01-065C18
Chromosome4 (Build37)
Map Location 18,341,462 - 18,342,046
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065C18.bB6Ng01-065C18.g
ACCDH884727DH884728
length1,255816
definitionDH884727|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C18, 5' end.DH884728|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagatattcaaagaagtcagaataccaaaacttatcaaagt
atttcataaaatagaaacagaatgagcactaactaatacattacatgaag
gcacagttacaataatacctaaaccacacaaagacacaacaaagaaagaa
aacttcagaacaatttccctcactaatattgatacaaaaatacttaataa
aattcttacaaacagaatacaagataacatcagaatgataattcaccatg
atcaactaagattcatcccagggaggcagagatggttcaataagtggaaa
tccatcaacttaatccactatataaacaaattgaaagaaaaacaaaacaa
aacatgatcatctcattagatgctgaaagtgcctacacttcatgctaaaa
gtattggagataataggaattcaaggtcaatacttaaatataataaaagt
agtatatagcaagccattagccaacatcaaattaaatggatagaaatttg
aagaaatccaacaaaattcatggatgaaaaaaggctgccctctctctccc
tatctactcaatatagtacttgaagttctggctacagaaattaggcaaca
agtggatatcaaagggatataaactggaaaggatgaagtcaagatattac
tatttacagacaataggatagtacgcatcagtgataccaaaatccatgag
agaactcgtaaaatggataaacaatttcagcaaagtggctggatataaaa
ttaaatttaaaaaattagtacctttgctctattcaaaggatcacttagat
gagaaagaaattagggaaaagacccccttcacaatagtcacaaataatat
gaaatatcttgttgtgacactaaccaaacaagttattgtctaatcggcat
gacaagtctctgaagaaagaaatgaaaagatcttcagaagatgtactgat
ctcccatgctcatggatcagcaagattatatagtaaatgacatcagcatc
ttcagattcaatgcatcccatcaaattcactcaatacctcacgagatgga
gggaattctcaacttattggaatacaaaaacccagattcaaaacattccc
acacaaaagacttctggggataccctaccttgacctcagctttttccaag
caatggtgataaacacggatgtaagcagaatgagtacatggaaattgatc
ggataccaccttgcatgacttgaggaacaactctctaagaagtttttata
cagtg
gaattctctctagtgagagctgaaaggtctggaaatctttagagagcaaa
aacagcccttcaagatttctttctttctctttctctttttattttatttt
atttttttattttattattttgaattggttattttgtttatttacatttt
aatgttatgcccattcctggcttatccttcacaaatccattatcccctcc
ccttccccctgcctctatgagggtgctcccccacctgcccaccaactctt
gcctcagggccctatcattcccctactctgggtcattgacctttcacaca
accaagggacttccctcccagtgatgccagataaggccatcctctgctac
attagcagctggagccatgggtacctccatgtgtactctttgtttagggg
tctggtttgttgttgttcttatcaggttgctaaccccttcagctccttca
gtccttcccataactcctccattggaatgtccaagctcagtccaaagttg
actgtgtacattcacttctgtatttgtaaggctctggcagaacctctaca
tgggagagctaaaccaggctcctgtcagcaagcactgcttggcatcagga
atagtgtctgagtttggtgtctgcagatagggatgggatccctaagtggg
agagtctctggatggccattctttcagtctctgctccactctttgtccct
acatttcttttgacagaagcaattaaatatttttgagatgggtgggtggc
ttcatccatcaaccatttttttccttcaccctcctctctccttcccagat
ccctccttcctctact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18341462_18342046
seq2: B6Ng01-065C18.g_70_654

seq1  GAATTCTCTCTAGTGAGAGCTGAAAGGTCTGGAAATCTTTAGAGAGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTAGTGAGAGCTGAAAGGTCTGGAAATCTTTAGAGAGCAAA  50

seq1  AACAGCCCTTCAAGATTTCTTTCTTTCTCTTTCTCTTTTTATTTTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCCTTCAAGATTTCTTTCTTTCTCTTTCTCTTTTTATTTTATTTT  100

seq1  ATTTTTTTATTTTATTATTTTGAATTGGTTATTTTGTTTATTTACATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTATTTTATTATTTTGAATTGGTTATTTTGTTTATTTACATTTT  150

seq1  AATGTTATGCCCATTCCTGGCTTATCCTTCACAAATCCATTATCCCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATGCCCATTCCTGGCTTATCCTTCACAAATCCATTATCCCCTCC  200

seq1  CCTTCCCCCTGCCTCTATGAGGGTGCTCCCCCACCTGCCCACCAACTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCTGCCTCTATGAGGGTGCTCCCCCACCTGCCCACCAACTCTT  250

seq1  GCCTCAGGGCCCTATCATTCCCCTACTCTGGGTCATTGACCTTTCACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGGCCCTATCATTCCCCTACTCTGGGTCATTGACCTTTCACACA  300

seq1  ACCAAGGGACTTCCCTCCCAGTGATGCCAGATAAGGCCATCCTCTGCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGGACTTCCCTCCCAGTGATGCCAGATAAGGCCATCCTCTGCTAC  350

seq1  ATTAGCAGCTGGAGCCATGGGTACCTCCATGTGTACTCTTTGTTTAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAGCTGGAGCCATGGGTACCTCCATGTGTACTCTTTGTTTAGGGG  400

seq1  TCTGGTTTGTTGTTGTTCTTATCAGGTTGCTAACCCCTTCAGCTCCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTGTTGTTGTTCTTATCAGGTTGCTAACCCCTTCAGCTCCTTCA  450

seq1  GTCCTTCCCATAACTCCTCCATTGGAATGTCCAAGCTCAGTCCAAAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCCATAACTCCTCCATTGGAATGTCCAAGCTCAGTCCAAAGTTG  500

seq1  ACTGTGTACATTCACTTCTGTATTTGTAAGGCTCTGGCAGAACCTCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTACATTCACTTCTGTATTTGTAAGGCTCTGGCAGAACCTCTACA  550

seq1  TGGGAGAGCTAAACCAGGCTCCTGTCAGCAAGCAC  585
      |||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGCTAAACCAGGCTCCTGTCAGCAAGCAC  585