BAC Information

Click to search

BAC

Clone NameB6Ng01-066O22
Chromosome4 (Build37)
Map Location 103,075,932 - 103,077,057
singlet/doubletsinglet
Overlap genenone
Upstream genePde4b, Sgip1, Tctex1d1, Insl5, Wdr78, Mier1, Slc35d1, 4921539E11Rik, 4930456L15Rik, Oma1
Downstream geneLOC665451, LOC100039940, EG665460, LOC622315, Dab1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066O22.bB6Ng01-066O22.g
ACCDH885971DH885972
length1,1221,165
definitionDH885971|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O22, 5' end.DH885972|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgaccctgacgtcagggtcactatgccctgaaaatcttccgt
ctatcaggctgccctcatccctgttgtctgattgctccttcctgtttctt
ttgagcatccctcctccttctctgcttgtgaatgtgactggctcacctct
gaagtgttctcatggcccacctgtccccacttcctcctgccttcagtcta
ctggctatctgatctgctgctgagaaggaggaggaggactacaaaagttt
tccagttcctttctttgtagggtgttggtggatcaattgtagtagctgac
ggttttcactgcttgctgagaccctaatgggatcccaagttacagtcttt
tttttttttttttcctgcttatgtttcctgtccaaacatttctccttgga
aatgcacgtgggccttcttgtccccaatctcttttcttctcccataattt
ggcttctttgtaaataagctcagcacaaggaccagccctgcatcttggga
agcaccaatcccccactggtttggtatagttcttactctgtactttaagc
agaggaaaagtatgaaattagggtcagatcattggtgattcagattaaaa
tttcatgagacaggttatataagccctccctccacttcagttttgttttt
gtttttttgttttgttttgtttttttaatagtaaaactggtgggtaaaat
tcctggcattcaccttgccacacaatcccattttagttcagatcttagca
atcacaaactcctggggagggggtcaaagccattgaagggtttatcatga
ccaagatgatcatgctagttcatttcatcgtcttgatgattggttcagtg
tagtcatgtgttagaatcctaaccaatgagatgatagggggctgtctgat
gggggaggcattaagaaacaagttcttcagtggaatcagaggaatgggga
gcattttctcccaccaaatagtggcttttctcggagcctggagctgctag
tgcattccactgcaccgaggaaagcccacactgtgtagaagggacattta
gcaaaggctgaaaatcccagtccaatgacattcttaactactttatcccc
ttaaaacctgctttctagcctt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcacaatggctaagatcaaaaattcaggtgacaac
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcaaccttatttacaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacattg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggatctgagatga
aaggatgaaccatgtagagactgccatatccagggatccaccgcataatc
agcatccaaacgctgacaccattgcatacactagcaagattttttcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acaaagtggatgctcacagtcagctaatagatggatcacagggctcccaa
ttgaggagctagagaaagtacccaaggagctaaagggatctgcaacccta
tagtgaacaacatatgacttaccagtaccccggagctcttgactctagct
tcatatgtatcaaagatggcctagtcgccatcactgggaaagaaaggtca
ttggcctgcaaactgtatgctcaagtacagggaacgccaggccaaaaagg
gggatgtggtgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_103075932_103077057
seq2: B6Ng01-066O22.b_48_1169

seq1  GAATTCTATGACCCTGACGTCAGGGTCACTATGCCCTGAAAATCTTCCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGACCCTGACGTCAGGGTCACTATGCCCTGAAAATCTTCCGT  50

seq1  CTATCAGGCTGCCCTCATCCCTGTTGTCTGATTGCTCCTTCCTGTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGGCTGCCCTCATCCCTGTTGTCTGATTGCTCCTTCCTGTTTCTT  100

seq1  TTGAGCATCCCTCCTCCTTCTCTGCTTGTGAATGTGACTGGCTCACCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCATCCCTCCTCCTTCTCTGCTTGTGAATGTGACTGGCTCACCTCT  150

seq1  GAAGTGTTCTCATGGCCCACCTGTCCCCACTTCCTCCTGCCTTCAGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTCTCATGGCCCACCTGTCCCCACTTCCTCCTGCCTTCAGTCTA  200

seq1  CTGGCTATCTGATCTGCTGCTGAGAAGGAGGAGGAGGACTACAAAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTATCTGATCTGCTGCTGAGAAGGAGGAGGAGGACTACAAAAGTTT  250

seq1  TCCAGTTCCTTTCTTTGTAGGGTGTTGGTGGATCAATTGTAGTAGCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCCTTTCTTTGTAGGGTGTTGGTGGATCAATTGTAGTAGCTGAC  300

seq1  GGTTTTCACTGCTTGCTGAGACCCTAATGGGATCCCAAGTTACAGTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCACTGCTTGCTGAGACCCTAATGGGATCCCAAGTTACAGTCTTT  350

seq1  TTTTTTTTTTTTTCCTGCTTATGTTTCCTGTCCAAACATTTCTCCTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCCTGCTTATGTTTCCTGTCCAAACATTTCTCCTTGGA  400

seq1  AATGCACGTGGGCCTTCTTGTCCCCAATCTCTTTTCTTCTCCCATAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACGTGGGCCTTCTTGTCCCCAATCTCTTTTCTTCTCCCATAATTT  450

seq1  GGCTTCTTTGTAAATAAGCTCAGCACAAGGACCAGCCCTGCATCTTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTTTGTAAATAAGCTCAGCACAAGGACCAGCCCTGCATCTTGGGA  500

seq1  AGCACCAATCCCCCACTGGTTTGGTATAGTTCTTACTCTGTACTTTAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAATCCCCCACTGGTTTGGTATAGTTCTTACTCTGTACTTTAAGC  550

seq1  AGAGGAAAAGTATGAAATTAGGGTCAGATCATTGGTGATTCAGATTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAAGTATGAAATTAGGGTCAGATCATTGGTGATTCAGATTAAAA  600

seq1  TTTCATGAGACAGGTTATATAAGCCCTCCCTCCACTTCAGTTTTGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAGACAGGTTATATAAGCCCTCCCTCCACTTCAGTTTTGTTTTT  650

seq1  GTTTTTTTGTTTTGTTTTGTTTTTTTAATAGTAAAACTGGTGGGTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTGTTTTGTTTTGTTTTTTTAATAGTAAAACTGGTGGGTAAAAT  700

seq1  TCCTGGCATTCACCTTGCCACACAATCCCATTTTAGTTCAGATCTTAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCATTCACCTTGCCACACAATCCCATTTTAGTTCAGATCTTAGCA  750

seq1  ATCACAAACTCCTGGGGAGGGGGTCAAAGCCATTGAAGGGTTTATCATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAACTCCTGGGGAGGGGGTCAAAGCCATTGAAGGGTTTATCATGA  800

seq1  CCAAGATGATCATGCTAGTTCATTTCATCGTCTTGATGATTGGTTCAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGATCATGCTAGTTCATTTCATCGTCTTGATGATTGGTTCAGTG  850

seq1  TAGTCATGTGTTAGAATCCTAACCAATGAGATGATAGGGGGCTGTCTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATGTGTTAGAATCCTAACCAATGAGATGATAGGGGGCTGTCTGAT  900

seq1  -GGGGAGGCATTAGGAAACAAGTTCTTCAGTGGAAACAGAGGAA-GGGGA  948
       |||||||||||| ||||||||||||||||||||| |||||||| |||||
seq2  GGGGGAGGCATTAAGAAACAAGTTCTTCAGTGGAATCAGAGGAATGGGGA  950

seq1  GCATTTTCTCCCACCAAATAGTGGCTTTTCTCGGAGCCTGGAGCTGC-AG  997
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCATTTTCTCCCACCAAATAGTGGCTTTTCTCGGAGCCTGGAGCTGCTAG  1000

seq1  TGGCCATT-CACTGCACCAAAGGAAAAGCCCACACTGTG-AG-AGGGACA  1044
      ||  |||| ||||||||| |  | ||||||||||||||| || |||||||
seq2  TG--CATTCCACTGCACCGA--GGAAAGCCCACACTGTGTAGAAGGGACA  1046

seq1  TTAAGGCAGAAAGCTGAAAATCCCAGTTCCAGATGACATTCTTAAACTAC  1094
      || | ||| || |||||||||||||| |||| ||||||||||| ||||||
seq2  TTTA-GCA-AAGGCTGAAAATCCCAG-TCCA-ATGACATTCTT-AACTAC  1091

seq1  TTTATCCTCTTTAAACCTGCCTTCTCAGCCTT  1126
      ||||||| ||| |||||||| |||| ||||||
seq2  TTTATCCCCTTAAAACCTGCTTTCT-AGCCTT  1122