BAC Information

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BAC

Clone NameB6Ng01-067G03
Chromosome4 (Build37)
Map Location 36,721,430 - 36,870,264
singlet/doubletdoublet
Overlap genenone
Upstream geneLingo2
Downstream geneLOC100042132, LOC545600, LOC621458
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067G03.bB6Ng01-067G03.g
ACCDH886288DH886289
length1,0601,036
definitionDH886288|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G03, 5' end.DH886289|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,869,716 - 36,870,264)(36,721,430 - 36,722,469)
sequence
gaattcaatatattgttttatgccaaggaatcctaaaatggagaggcagc
tctatcagcaactgaggaatcttcgaggtagtacagatttttttccattt
gaattataaatatctgggtgtcaattatccagaggagcagcaattctcaa
aaattctcaacatttcttaggctattctcatttaaatttttagattgttt
ctaaatgatcattcttgttaggaatggtaaacttactatattttattgca
tttaaactgagtatcacttatctaggctgttccaatttcccattgattgt
gaaaacaatagcaatgaaaatagaccagaaagtatttctgcagtatgtca
aagacaactttgcaaatatgccttggagtggcgcttttaaggaccctcca
tattgacttccatcagagctgtaccagttgaattcatgcccacagttgga
aaagtgtttcctttgcctggtgtcaatgtgagcatgagttgtccttttat
tttatgtttttattatagacattctgactggctaatatgaagtttcaaag
tagttttaatttgtatttctctttggcttaaaatgtgggacatttaaaaa
tattttcagccatttgtaattttccttttgagtactttagttctagagcc
aaacttgaataaagttttatttatgtattttatgtatgtgagtacatggt
ttctgacacaccagaagagagtatcaaatcccattacagatggttgtgag
ccaccatgtggttttggggaattgaactcaggacctctggaagagctgtc
agtgctcttaaccactgagtcatctttccagtcccacagctgaactttta
attgagtagtttacttacatgattaatttttatggttttgattcatttgt
atcagctagatactacctctctaccagatgcatacgtgtgagatgattcc
cctttctacggtctgtgtcctcagtcaatgaaggagtattttgctatgtg
gcattttcatttcatgagctccatgcagttgttgggcttgtgatgtgctc
agcaagatcc
gaattcatttttctagcatattctaaaactgagtttctccccaaaattat
gtgctaatttacaaatagtataagtaaacagacattttaattattttatt
ttattgcttttattaaagtcatgatgatcattttatttcctaatccattt
aactaacctatgggtttttttgttttgttttgtttttgtttttttgcttt
tgttttttaaccagggaattgaggatatttaaactcattattgaaggatg
tatttgactgctggactttatttggatgtttgccatttatattcttagcg
ctactatatgcttctgtgtttatagcttcatttgttttctttctatactc
tcttgtctatgctttttcctctcttgatctttagtgcatctaaaatatgg
atatattagttgcaattaatactgagttttaaattaattaatattgaaat
acaaaacaagcattttaggtaaaattttaacgctaaatattatcttaaag
tagaaaatgaagtcaataaaattctattttgacttcatatctatatttga
gagtatatacacgacaagtttgaataaattccattgcctactcctcctgt
tctattccacgtctagctctctaacctcagtagaaatattctattctggt
ttcattttgtttgtttttaatttgtttgtttatttaaacccattgagttt
ctttattactgacagtatgtgcgatggtgtaggcgcatttactgggtcct
gagaggcagtacccttgactgaaatggaattttcttctagtagaattttt
cagattgctaactgatcctcagatgggctgaaatattgtgctaatcacca
gcctccctggtattacgttgtctgggctttatcttgtacagacctcaagc
ttctgtcccaactgccatggagttcatagtggcagctgcttctgcattgt
cagagacagctttccctgtagtcacaaacacagtttgcctcaaatcactt
tgcccttttatggagtgatcgctgaaactttggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_36869716_36870264
seq2: B6Ng01-067G03.b_46_594 (reverse)

seq1  TTTGAAACTTCATATTAGCCAGTCAGAATGTCTATAATAAAAACATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACTTCATATTAGCCAGTCAGAATGTCTATAATAAAAACATAAAA  50

seq1  TAAAAGGACAACTCATGCTCACATTGACACCAGGCAAAGGAAACACTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGACAACTCATGCTCACATTGACACCAGGCAAAGGAAACACTTTT  100

seq1  CCAACTGTGGGCATGAATTCAACTGGTACAGCTCTGATGGAAGTCAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGTGGGCATGAATTCAACTGGTACAGCTCTGATGGAAGTCAATAT  150

seq1  GGAGGGTCCTTAAAAGCGCCACTCCAAGGCATATTTGCAAAGTTGTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTCCTTAAAAGCGCCACTCCAAGGCATATTTGCAAAGTTGTCTTT  200

seq1  GACATACTGCAGAAATACTTTCTGGTCTATTTTCATTGCTATTGTTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACTGCAGAAATACTTTCTGGTCTATTTTCATTGCTATTGTTTTCA  250

seq1  CAATCAATGGGAAATTGGAACAGCCTAGATAAGTGATACTCAGTTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAATGGGAAATTGGAACAGCCTAGATAAGTGATACTCAGTTTAAAT  300

seq1  GCAATAAAATATAGTAAGTTTACCATTCCTAACAAGAATGATCATTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAAATATAGTAAGTTTACCATTCCTAACAAGAATGATCATTTAGA  350

seq1  AACAATCTAAAAATTTAAATGAGAATAGCCTAAGAAATGTTGAGAATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTAAAAATTTAAATGAGAATAGCCTAAGAAATGTTGAGAATTTT  400

seq1  TGAGAATTGCTGCTCCTCTGGATAATTGACACCCAGATATTTATAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATTGCTGCTCCTCTGGATAATTGACACCCAGATATTTATAATTCA  450

seq1  AATGGAAAAAAATCTGTACTACCTCGAAGATTCCTCAGTTGCTGATAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAAAAATCTGTACTACCTCGAAGATTCCTCAGTTGCTGATAGAG  500

seq1  CTGCCTCTCCATTTTAGGATTCCTTGGCATAAAACAATATATTGAATTC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTCCATTTTAGGATTCCTTGGCATAAAACAATATATTGAATTC  549

seq1: chr4_36721430_36722469
seq2: B6Ng01-067G03.g_69_1104

seq1  GAATTCATTTTTCTAGCATATTCTAAAACTGAGTTTCTCCCCAAAATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTTCTAGCATATTCTAAAACTGAGTTTCTCCCCAAAATTAT  50

seq1  GTGCTAATTTACAAATAGTATAAGTAAACAGACATTTTAATTATTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAATTTACAAATAGTATAAGTAAACAGACATTTTAATTATTTTATT  100

seq1  TTATTGCTTTTATTAAAGTCATGATGATCATTTTATTTCCTAATCCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTTTTATTAAAGTCATGATGATCATTTTATTTCCTAATCCATTT  150

seq1  AACTAACCTATGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTTTGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACCTATGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTTTGCTTT  200

seq1  TGTTTTTTAACCAGGGAATTGAGGATATTTAAACTCATTATTGAAGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTAACCAGGGAATTGAGGATATTTAAACTCATTATTGAAGGATG  250

seq1  TATTTGACTGCTGGACTTTATTTGGATGTTTGCCATTTATATTCTTAGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACTGCTGGACTTTATTTGGATGTTTGCCATTTATATTCTTAGCG  300

seq1  CTACTATATGCTTCTGTGTTTATAGCTTCATTTGTTTTCTTTCTATACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATATGCTTCTGTGTTTATAGCTTCATTTGTTTTCTTTCTATACTC  350

seq1  TCTTGTCTATGCTTTTTCCTCTCTTGATCTTTAGTGCATCTAAAATATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTATGCTTTTTCCTCTCTTGATCTTTAGTGCATCTAAAATATGG  400

seq1  ATATATTAGTTGCAATTAATACTGAGTTTTAAATTAATTAATATTGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAGTTGCAATTAATACTGAGTTTTAAATTAATTAATATTGAAAT  450

seq1  ACAAAACAAGCATTTTAGGTAAAATTTTAACGCTAAATATTATCTTAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAGCATTTTAGGTAAAATTTTAACGCTAAATATTATCTTAAAG  500

seq1  TAGAAAATGAAGTCAATAAAATTCTATTTTGACTTCATATCTATATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATGAAGTCAATAAAATTCTATTTTGACTTCATATCTATATTTGA  550

seq1  GAGTATATACACGACAAGTTTGAATAAATTCCATTGCCTACTCCTCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATATACACGACAAGTTTGAATAAATTCCATTGCCTACTCCTCCTGT  600

seq1  TCTATTCCACGTCTAGCTCTCTAACCTCAGTAGAAATATTCTATTCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCACGTCTAGCTCTCTAACCTCAGTAGAAATATTCTATTCTGGT  650

seq1  TTCATTTTGTTTGTTTTTAATTTGTTTGTTTATTTAAACCCATTGAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTGTTTGTTTTTAATTTGTTTGTTTATTTAAACCCATTGAGTTT  700

seq1  CTTTATTACTGACAGTATGTGCGATGGTGTAGGCGCATTTACTGGGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTACTGACAGTATGTGCGATGGTGTAGGCGCATTTACTGGGTCCT  750

seq1  GAGAGGCAGTACCCTTGACTGAAATGGAATTTTCTTCTAGTAGAATTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGTACCCTTGACTGAAATGGAATTTTCTTCTAGTAGAATTTTT  800

seq1  CAGATTGCTAACTGATCCTCAGATGGGCTGAAATATTGTGCTAATCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGCTAACTGATCCTCAGATGGGCTGAAATATTGTGCTAATCACCA  850

seq1  GCCTCCCTGGTATTACGTTGTCT-GGCTTTATCTTGTACAGACCTCAAGC  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCCTCCCTGGTATTACGTTGTCTGGGCTTTATCTTGTACAGACCTCAAGC  900

seq1  TTCCTGTCCCAACTGCCAT-GAGTTCATAGTGGCAGCTGC-TCTGCAGTG  947
      || |||||||||||||||| |||||||||||||||||||| |||||| ||
seq2  TT-CTGTCCCAACTGCCATGGAGTTCATAGTGGCAGCTGCTTCTGCATTG  949

seq1  TCCAGAAGACAGCTTTCCCTGTAGTCACAAACCACAGTTTGCCCTCACAA  997
      | ||| ||||||||||||||||||||||||| ||||||||| ||||| ||
seq2  T-CAG-AGACAGCTTTCCCTGTAGTCACAAA-CACAGTTTG-CCTCA-AA  994

seq1  TCACTTTGCCCTTTTACTGTAGTGATCGCTGAGACTTGGGAGG  1040
      |||||||||||||||| || |||||||||||| |||| |||||
seq2  TCACTTTGCCCTTTTA-TGGAGTGATCGCTGAAACTTTGGAGG  1036