BAC Information

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BAC

Clone NameB6Ng01-069F02
Chromosome4 (Build37)
Map Location 127,255,799 - 127,437,948
singlet/doubletdoublet
Overlap genenone
Upstream geneClspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320, Sfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296
Downstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik, Zscan20, Tlr12, Phc2, A3galt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069F02.bB6Ng01-069F02.g
ACCDH887663DH887664
length842649
definitionDH887663|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F02, 5' end.DH887664|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,255,799 - 127,256,640)(127,437,301 - 127,437,948)
sequence
gaattcccagtagtcttcattcaggatgaaatcatggtcacagactggga
actagaggtgaaaggagcttttttttttttttttttttttttattaagtc
atactagcttgagtggagtttgtacaatatggaagtagagaggtagttct
agatagaaagtggatctggtatcaagtgttatctaatgagacttagtaga
cttgcttgaagacagtttttccctttgcttatgctttcagggtcatttcc
agagagtttaaacatatttcaccaaatgttctttggagggagtcttctat
gttcctcctcctacttcttagagaaccttcttccccataacaatttaaaa
atatagagagagagctaaatgggactaaatggagtctgttttggttgagt
accaccttgacgtcttggactgggaggttatgatgaccagaaatggggac
aaacaagatgcaatcctcagcagcagatgttaaagaaggaagagcaggct
gctgagtggccacggatttgcctttccgttgtcagagagatcaatatcat
tactcagcaactcgaaatgacggcagcaataaaagtgcaattgcatttgt
ttgaaggcctaacccagctcttggcttcaaattacttataagctctgagg
gtaaacagcaagtgcggaggctgattagaaagagggtatagatctaaaag
ccaatctcgtccgtgtagttaaggaggaagtggaacctggaggggataaa
gcattaccatttccaaaacgggcgacttatccaaagaggacctcaccgga
ctggctgtgagttgatggacttgggtttggggaggtggtggg
gaattctttcatgtcttcttttatgcccagcactcccttctagatatttc
tatcccccagtcctattcagctgtgtctgtggaatcccacatgctaaatg
aggactctggaattcagagaaggaacttgcccaatgcctgacacgtgatt
tatagagctagaaaaagcaggactgaaataaacactctagtgtgctacct
ccttgctaccagagcagcctgagtaccaagaggaaggggtatcacagctg
ggcacatctggaacctctctggaccttgaccacaaagggctcaaacacct
aagaaacctgctcccaaggagcaagtgggtgtcagggtgctgtctctgca
ctgggtgtcaacattacctcctgccttgggctttgtgcttgactccgagg
acaaagccttaggacaacgcagattcctgcttctcctaacatcacagact
gccaggacaaaagactgccaggaaatcatgataaggtgtaataagaactt
atcctgatccattttctgtttctatagcaaaatatctgaggctggatgat
tcctaaaggaaagctgttttagctcaaggttacacaggccccacccagaa
gatggtccaagcatctttcttggcttctggggacgggggtggggggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_127255799_127256640
seq2: B6Ng01-069F02.b_50_891

seq1  GAATTCCCAGTAGTCTTCATTCAGGATGAAATCATGGTCACAGACTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGTAGTCTTCATTCAGGATGAAATCATGGTCACAGACTGGGA  50

seq1  ACTAGAGGTGAAAGGAGCTTTTTTTTTTTTTTTTTTTTTTTTATTAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGGTGAAAGGAGCTTTTTTTTTTTTTTTTTTTTTTTTATTAAGTC  100

seq1  ATACTAGCTTGAGTGGAGTTTGTACAATATGGAAGTAGAGAGGTAGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGCTTGAGTGGAGTTTGTACAATATGGAAGTAGAGAGGTAGTTCT  150

seq1  AGATAGAAAGTGGATCTGGTATCAAGTGTTATCTAATGAGACTTAGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAAGTGGATCTGGTATCAAGTGTTATCTAATGAGACTTAGTAGA  200

seq1  CTTGCTTGAAGACAGTTTTTCCCTTTGCTTATGCTTTCAGGGTCATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGAAGACAGTTTTTCCCTTTGCTTATGCTTTCAGGGTCATTTCC  250

seq1  AGAGAGTTTAAACATATTTCACCAAATGTTCTTTGGAGGGAGTCTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTTAAACATATTTCACCAAATGTTCTTTGGAGGGAGTCTTCTAT  300

seq1  GTTCCTCCTCCTACTTCTTAGAGAACCTTCTTCCCCATAACAATTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCCTCCTACTTCTTAGAGAACCTTCTTCCCCATAACAATTTAAAA  350

seq1  ATATAGAGAGAGAGCTAAATGGGACTAAATGGAGTCTGTTTTGGTTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGAGAGAGCTAAATGGGACTAAATGGAGTCTGTTTTGGTTGAGT  400

seq1  ACCACCTTGACGTCTTGGACTGGGAGGTTATGATGACCAGAAATGGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTTGACGTCTTGGACTGGGAGGTTATGATGACCAGAAATGGGGAC  450

seq1  AAACAAGATGCAATCCTCAGCAGCAGATGTTAAAGAAGGAAGAGCAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGATGCAATCCTCAGCAGCAGATGTTAAAGAAGGAAGAGCAGGCT  500

seq1  GCTGAGTGGCCACGGATTTGCCTTTCCGTTGTCAGAGAGATCAATATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTGGCCACGGATTTGCCTTTCCGTTGTCAGAGAGATCAATATCAT  550

seq1  TACTCAGCAACTCGAAATGACGGCAGCAATAAAAGTGCAATTGCATTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGCAACTCGAAATGACGGCAGCAATAAAAGTGCAATTGCATTTGT  600

seq1  TTGAAGGCCTAACCCAGCTCTTGGCTTCAAATTACTTATAAGCTCTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGCCTAACCCAGCTCTTGGCTTCAAATTACTTATAAGCTCTGAGG  650

seq1  GTAAACAGCAAGTGCGGAGGCTGATTAGAAAGAGGGTATAGATCTAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGCAAGTGCGGAGGCTGATTAGAAAGAGGGTATAGATCTAAAAG  700

seq1  CCAATCTCGTCCGTGTAGTTAAGGAGGAAGTGGAACCTGGAGGGGATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTCGTCCGTGTAGTTAAGGAGGAAGTGGAACCTGGAGGGGATAAA  750

seq1  GCATTACCATTTCCAAAACGGGCGACTTATCCAAAGAGGACCTCACCGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTACCATTTCCAAAACGGGCGACTTATCCAAAGAGGACCTCACCGGA  800

seq1  CTGGCTGTGAGTTGATGGACTTGGGTTTGGGGAGGTGGTGGG  842
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTGAGTTGATGGACTTGGGTTTGGGGAGGTGGTGGG  842

seq1: chr4_127437301_127437948
seq2: B6Ng01-069F02.g_70_718 (reverse)

seq1  CATCCCCCCACCCCCGTCCCCAGAAGCCAAG-AAGATGCTTGGACCATCT  49
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATCCCCCCACCCCCGTCCCCAGAAGCCAAGAAAGATGCTTGGACCATCT  50

seq1  TCTGGGTGGGGCCTGTGTAACCTTGAGCTAAAACAGCTTTCCTTTAGGAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGGGGCCTGTGTAACCTTGAGCTAAAACAGCTTTCCTTTAGGAA  100

seq1  TCATCCAGCCTCAGATATTTTGCTATAGAAACAGAAAATGGATCAGGATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAGCCTCAGATATTTTGCTATAGAAACAGAAAATGGATCAGGATA  150

seq1  AGTTCTTATTACACCTTATCATGATTTCCTGGCAGTCTTTTGTCCTGGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTATTACACCTTATCATGATTTCCTGGCAGTCTTTTGTCCTGGCA  200

seq1  GTCTGTGATGTTAGGAGAAGCAGGAATCTGCGTTGTCCTAAGGCTTTGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGATGTTAGGAGAAGCAGGAATCTGCGTTGTCCTAAGGCTTTGTC  250

seq1  CTCGGAGTCAAGCACAAAGCCCAAGGCAGGAGGTAATGTTGACACCCAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAGTCAAGCACAAAGCCCAAGGCAGGAGGTAATGTTGACACCCAGT  300

seq1  GCAGAGACAGCACCCTGACACCCACTTGCTCCTTGGGAGCAGGTTTCTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGACAGCACCCTGACACCCACTTGCTCCTTGGGAGCAGGTTTCTTA  350

seq1  GGTGTTTGAGCCCTTTGTGGTCAAGGTCCAGAGAGGTTCCAGATGTGCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGAGCCCTTTGTGGTCAAGGTCCAGAGAGGTTCCAGATGTGCCC  400

seq1  AGCTGTGATACCCCTTCCTCTTGGTACTCAGGCTGCTCTGGTAGCAAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGATACCCCTTCCTCTTGGTACTCAGGCTGCTCTGGTAGCAAGGA  450

seq1  GGTAGCACACTAGAGTGTTTATTTCAGTCCTGCTTTTTCTAGCTCTATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCACACTAGAGTGTTTATTTCAGTCCTGCTTTTTCTAGCTCTATAA  500

seq1  ATCACGTGTCAGGCATTGGGCAAGTTCCTTCTCTGAATTCCAGAGTCCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGTGTCAGGCATTGGGCAAGTTCCTTCTCTGAATTCCAGAGTCCTC  550

seq1  ATTTAGCATGTGGGATTCCACAGACACAGCTGAATAGGACTGGGGGATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCATGTGGGATTCCACAGACACAGCTGAATAGGACTGGGGGATAG  600

seq1  AAATATCTAGAAGGGAGTGCTGGGCATAAAAGAAGACATGAAAGAATTC  648
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTAGAAGGGAGTGCTGGGCATAAAAGAAGACATGAAAGAATTC  649