BAC Information

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BAC

Clone NameB6Ng01-070G16
Chromosome4 (Build37)
Map Location 137,155,364 - 137,300,405
singlet/doubletdoublet
Overlap geneUsp48, Rap1gap, Akp2
Upstream geneAof2, LOC433770, 4930549C01Rik, BC029684, Ephb2, C1qb, C1qc, C1qa, Epha8, Zbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2
Downstream geneEce1, LOC100040558, Eif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070G16.bB6Ng01-070G16.g
ACCDH888427DH888428
length1,0091,098
definitionDH888427|Mus musculus domesticus DNA, BAC clone: B6Ng01-070G16, 5' end.DH888428|Mus musculus domesticus DNA, BAC clone: B6Ng01-070G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,299,394 - 137,300,405)(137,155,364 - 137,156,473)
sequence
gaattcaaccttccacaagcctttctgcaaggccactgtaacactgcccc
ggcactggggacttgtgctggggtgacgtctccatgctttctgcttatag
tgatatgttcatgacgaaatgaaactgggctttggaatgggttggacctg
agcccctatccagtactcccaagggaattcttcctgccccccccacgctt
ccttagtcactccatctaagacaccccatacccagagttgttgtaaaatc
aaacacgatgcttctttatcgtgccaagcacacaatagggacttaggcat
gctcccctgcccttccctcccttcccctctgctgaaggcttcagcgaccc
cttaaaacagctaaggatgctgagccaggagccgaggcttgtgggagaga
tccaggcttggatcccgtggttctcccttctctgtggctctgctttcccc
acatgccccgccccctacattctccttgctcaccctctgaaggccacttg
gccatgagatgcctgaggtagacctggcacagggagtccctggtgaaggt
cgctgtcatcccatatcaaggagatgttaatctgatgacagtgtcctggg
gcctgtgagggcagggctccctcccctgtcgcctcatgggaggcctttgt
cttgatgtccctaggaggcaggattgaccacggacatcatgagggtaagg
ccaagcaggctctgcatgaagcagtggagatggaccaggccattggcaag
gcaggcgccatgacatcccagaaagacaccttgactgtggttactgctga
tcattcccacgttttcacattcggtggatacaccccccggggcaactcca
tctttggtgagtagcctgtccctgggatacagcgaagcagcctgtcccat
gagaactgatgacagttgagatactggaatgggaggggagaatccaagag
agctgacacctgggcgatgggtgggtgtgcagcaagagacatgggggagg
ggcatgggg
gaattcttgaggagatggctcagtggttaagacctttggctgctcttgca
gaggacctgggttcacttggttctaagcatccacatggtaattcagttac
aggagatctgatgccgttttacagcctcccagggctcctgcatgtacaca
gtgcacacaaagcttggagaagcagttagagggcctttgctgtaagttct
tctctgcataaagccttctgtggttacttgttactccggggtaggtctac
cctctcgttggggggcttgtcctacctgctgtggcctctttagctttcct
gtttggtgtgctggacggttttcctagccgaatctctccacttgctgtct
gtctgtcgtctgctgcaatgagtctgtttctgcttgttcttggagactcc
cggtggggtagcactttcccctctgtgaggcctctgctgcagtgctctgt
gtctactgttaccataacgcttgtttatctgacgcttgtgcttaccagtt
tgtcaaccagttctgagccttctgtttgtttttttgagacaggctaacct
caaacacaacaatccactctgtctctgtctctgtctctgtctctgtctct
ctctctctctctctctctctttctctctctctctctctttctattttcca
ctgtctcttgagtgctaggattaaaggcatgtgccaccaccaccctggtt
tgggccattctttaacaactggaccttttgtctttcatcaaaggcatacc
tggtctgtacttcctagtccggcatctctctgtgacagaatatatgaacc
tgcaagccttgttgttgtgctacggtgacagggttaattatacataatca
cactgcttacctttactccggtgccttgtgacatgtctggaagccagatg
ctgtcagcatatatgtcagtagcaaatgaaacctttgtgacatcatcact
ctgtatataaactacccaaatggatcttcaccatgggcccttaagccagc
gcacttcatagctgtcaacatggtctattactccactaatgaagctaaaa
ccagcatgaatgctactaggagtgctacagtcctgtcttaagaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137299394_137300405
seq2: B6Ng01-070G16.b_41_1049 (reverse)

seq1  CCCCATGCCCCTCCCCCATGTTCTCTTTGCTGCACACCCACCCATCGCCC  50
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  CCCCATGCCCCTCCCCCATG-TCTC-TTGCTGCACACCCACCCATCGCCC  48

seq1  AGGTGTTCAGCTCTCTTGGATTCTCCCCTCCCCTTCCAGTATCTCAACTG  100
      ||||| |||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGTG-TCAGCTCTCTTGGATTCTCCCCTCCCATTCCAGTATCTCAACTG  97

seq1  TCATCAGTTCTCATGGGACAGGCTGCTTCGCTGTATCCCAGGGACAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGTTCTCATGGGACAGGCTGCTTCGCTGTATCCCAGGGACAGGCT  147

seq1  ACTCACCAAAGATGGAGTTGCCCCGGGGGGTGTATCCACCGAATGTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCAAAGATGGAGTTGCCCCGGGGGGTGTATCCACCGAATGTGAAA  197

seq1  ACGTGGGAATGATCAGCAGTAACCACAGTCAAGGTGTCTTTCTGGGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGGAATGATCAGCAGTAACCACAGTCAAGGTGTCTTTCTGGGATGT  247

seq1  CATGGCGCCTGCCTTGCCAATGGCCTGGTCCATCTCCACTGCTTCATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCGCCTGCCTTGCCAATGGCCTGGTCCATCTCCACTGCTTCATGCA  297

seq1  GAGCCTGCTTGGCCTTACCCTCATGATGTCCGTGGTCAATCCTGCCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGCTTGGCCTTACCCTCATGATGTCCGTGGTCAATCCTGCCTCCT  347

seq1  AGGGACATCAAGACAAAGGCCTCCCATGAGGCGACAGGGGAGGGAGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACATCAAGACAAAGGCCTCCCATGAGGCGACAGGGGAGGGAGCCCT  397

seq1  GCCCTCACAGGCCCCAGGACACTGTCATCAGATTAACATCTCCTTGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCACAGGCCCCAGGACACTGTCATCAGATTAACATCTCCTTGATAT  447

seq1  GGGATGACAGCGACCTTCACCAGGGACTCCCTGTGCCAGGTCTACCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGACAGCGACCTTCACCAGGGACTCCCTGTGCCAGGTCTACCTCAG  497

seq1  GCATCTCATGGCCAAGTGGCCTTCAGAGGGTGAGCAAGGAGAATGTAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCATGGCCAAGTGGCCTTCAGAGGGTGAGCAAGGAGAATGTAGGG  547

seq1  GGCGGGGCATGTGGGGAAAGCAGAGCCACAGAGAAGGGAGAACCACGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCATGTGGGGAAAGCAGAGCCACAGAGAAGGGAGAACCACGGGA  597

seq1  TCCAAGCCTGGATCTCTCCCACAAGCCTCGGCTCCTGGCTCAGCATCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCCTGGATCTCTCCCACAAGCCTCGGCTCCTGGCTCAGCATCCTT  647

seq1  AGCTGTTTTAAGGGGTCGCTGAAGCCTTCAGCAGAGGGGAAGGGAGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTTTAAGGGGTCGCTGAAGCCTTCAGCAGAGGGGAAGGGAGGGAA  697

seq1  GGGCAGGGGAGCATGCCTAAGTCCCTATTGTGTGCTTGGCACGATAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGGGAGCATGCCTAAGTCCCTATTGTGTGCTTGGCACGATAAAGA  747

seq1  AGCATCGTGTTTGATTTTACAACAACTCTGGGTATGGGGTGTCTTAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCGTGTTTGATTTTACAACAACTCTGGGTATGGGGTGTCTTAGATG  797

seq1  GAGTGACTAAGGAAGCGTGGGGGGGGCAGGAAGAATTCCCTTGGGAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACTAAGGAAGCGTGGGGGGGGCAGGAAGAATTCCCTTGGGAGTAC  847

seq1  TGGATAGGGGCTCAGGTCCAACCCATTCCAAAGCCCAGTTTCATTTCGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGGGGCTCAGGTCCAACCCATTCCAAAGCCCAGTTTCATTTCGTC  897

seq1  ATGAACATATCACTATAAGCAGAAAGCATGGAGACGTCACCCCAGCACAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATATCACTATAAGCAGAAAGCATGGAGACGTCACCCCAGCACAA  947

seq1  GTCCCCAGTGCCGGGGCAGTGTTACAGTGGCCTTGCAGAAAGGCTTGTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGTGCCGGGGCAGTGTTACAGTGGCCTTGCAGAAAGGCTTGTGG  997

seq1  AAGGTTGAATTC  1012
      ||||||||||||
seq2  AAGGTTGAATTC  1009

seq1: chr4_137155364_137156473
seq2: B6Ng01-070G16.g_64_1161

seq1  GAATTCTTGAGGAGATGGCTCAGTGGTTAAGACCTTTGGCTGCTCTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGGAGATGGCTCAGTGGTTAAGACCTTTGGCTGCTCTTGCA  50

seq1  GAGGACCTGGGTTCACTTGGTTCTAAGCATCCACATGGTAATTCAGTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACCTGGGTTCACTTGGTTCTAAGCATCCACATGGTAATTCAGTTAC  100

seq1  AGGAGATCTGATGCCGTTTTACAGCCTCCCAGGGCTCCTGCATGTACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCTGATGCCGTTTTACAGCCTCCCAGGGCTCCTGCATGTACACA  150

seq1  GTGCACACAAAGCTTGGAGAAGCAGTTAGAGGGCCTTTGCTGTAAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACAAAGCTTGGAGAAGCAGTTAGAGGGCCTTTGCTGTAAGTTCT  200

seq1  TCTCTGCATAAAGCCTTCTGTGGTTACTTGTTACTCCGGGGTAGGTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCATAAAGCCTTCTGTGGTTACTTGTTACTCCGGGGTAGGTCTAC  250

seq1  CCTCTCGTTGGGGGGCTTGTCCTACCTGCTGTGGCCTCTTTAGCTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCGTTGGGGGGCTTGTCCTACCTGCTGTGGCCTCTTTAGCTTTCCT  300

seq1  GTTTGGTGTGCTGGACGGTTTTCCTAGCCGAATCTCTCCACTTGCTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTGTGCTGGACGGTTTTCCTAGCCGAATCTCTCCACTTGCTGTCT  350

seq1  GTCTGTCGTCTGCTGCAATGAGTCTGTTTCTGCTTGTTCTTGGAGACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCGTCTGCTGCAATGAGTCTGTTTCTGCTTGTTCTTGGAGACTCC  400

seq1  CGGTGGGGTAGCACTTTCCCCTCTGTGAGGCCTCTGCTGCAGTGCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGGGTAGCACTTTCCCCTCTGTGAGGCCTCTGCTGCAGTGCTCTGT  450

seq1  GTCTACTGTTACCATAACGCTTGTTTATCTGACGCTTGTGCTTACCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTGTTACCATAACGCTTGTTTATCTGACGCTTGTGCTTACCAGTT  500

seq1  TGTCAACCAGTTCTGAGCCTTCTGTTTGTTTTTTTGAGACAGGCTAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACCAGTTCTGAGCCTTCTGTTTGTTTTTTTGAGACAGGCTAACCT  550

seq1  CAAACACAACAATCCACTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACAACAATCCACTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCT  600

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTTTTCCA  650
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  CTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTTCTATTTTCCA  650

seq1  CTGTCTCTTGAGTGCTAGGATTAAAGGCATGTGCCACCACCACCCTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTGAGTGCTAGGATTAAAGGCATGTGCCACCACCACCCTGGTT  700

seq1  TGGGCCATTCTTTAACAACTGGACCTTTTGTCTTTCATCAAAGGCATACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATTCTTTAACAACTGGACCTTTTGTCTTTCATCAAAGGCATACC  750

seq1  TGGTCTGTACTTCCTAGTCCGGCATCTCTCTGTGACAGAATATATGAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGTACTTCCTAGTCCGGCATCTCTCTGTGACAGAATATATGAACC  800

seq1  TGCAAGCCTTGTTGTTGTGCTACGGTGACAGGGTTAATTATACATAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCCTTGTTGTTGTGCTACGGTGACAGGGTTAATTATACATAATCA  850

seq1  CACTGCTTACCTTTACTCCGGTGCCTTGTGACATGTCTGGAAGGCCAGAT  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACTGCTTACCTTTACTCCGGTGCCTTGTGACATGTCTGGAA-GCCAGAT  899

seq1  GCTGCCAGCAGATATGTCAGTAGCAAAATGAAACCTTTGTGACAGCATCA  950
      |||| ||||| ||||||||||||| ||||||||||||||||||| |||||
seq2  GCTGTCAGCATATATGTCAGTAGC-AAATGAAACCTTTGTGACATCATCA  948

seq1  CTCTGTATATAAACTACCCAAATGGATCTTCAACACAGGGGCCCTTAAGC  1000
      ||||||||||||||||||||||||||||||||   || ||||||||||||
seq2  CTCTGTATATAAACTACCCAAATGGATCTTCA--CCATGGGCCCTTAAGC  996

seq1  CAGCGCCACTTCCATAGCTGTCACCATGGTCTATTACTCCCACTAAATGA  1050
      ||||| ||||| ||||||||||| |||||||||||||| ||||| |||||
seq2  CAGCG-CACTT-CATAGCTGTCAACATGGTCTATTACT-CCACT-AATGA  1042

seq1  GCTTAAAACCAGCATGAAGGGCACATAGGATGGCTTAGCAGGTCCTGTCT  1100
         ||||||||||||||| |  || |||||  |||   || |||||||||
seq2  AGCTAAAACCAGCATGAATGCTAC-TAGGAGTGCT--ACA-GTCCTGTCT  1088

seq1  TAAAAAAAAA  1110
      ||| ||||||
seq2  TAAGAAAAAA  1098