BAC Information

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BAC

Clone NameB6Ng01-070P24
Chromosome4 (Build37)
Map Location 17,756,554 - 17,868,298
singlet/doubletdoublet
Overlap geneMmp16
Upstream geneLOC100040154, LOC667212, LOC100040173
Downstream geneLOC667251, LOC435772
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070P24.bB6Ng01-070P24.g
ACCDH888824DH888825
length1,085818
definitionDH888824|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P24, 5' end.DH888825|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,867,211 - 17,868,298)(17,756,554 - 17,757,371)
sequence
gaattctcttctagttttctcctttttttttttttttttttttttttggt
ttttgagacagggtttctctgcgtagctctggctgtcctggaattcactc
tgtagaccaggctgacctcgaactcagagatctgcctgcctctgcctcgc
aagtgctgggactaaaggtgtgcaccacccccgcccagctacttttctcc
ttttttgttgtagaaaaaaaaagaccaaaatcgtcttgggaatcttatct
aacatattattgtctatcatgaaaggaagctgggtaggacacaaagggaa
gcacgtgggagcagtaatgaaagcagagatgatggagaaaaaccactcac
tctggcttgccctctgtggattgttcagtttatgccttacattggccaca
tatggtactgttcacagtttaatgggcattcctacatgaactaacaactt
aaaagatgacccacaggccactctgatagaggtggttacacaaatcagtt
ctcttttccaggattctcagactgacaaccaagattcgccatcatagata
tcctatggaaactaaggtagtttggtttttctcatataattaattcatta
agatgaattgtccgtttagcaaccaactttcatttttgcctatggctatg
tcaacaaaaccttttgtgtgtttgtgtgttggggggtagttcctatgatt
cacaattttatttttttatgacactgggtctactggaaaaattgaattta
tcacataatgtgttcagtttaaattaagtatatgtgtctacacattttag
agatgtttttagttcatttttaagaatacaaattcataaaagagtacaat
atttttaaattctagaacttaacaagtactcatatataattgaatgaatt
tctactagaatagattatcacttctcaaactgttttggggcaaaagtgta
aatattgtttgccaagaatttagaatatgtgtatacacagaacacgattt
tcttgaaatgggtcataaatctaaacaaatcatttatgttttttaagcaa
catatataaaatcttatataggactaaaggcagtt
gaattctgttttgagccttctttctatggtaatatctcttttcctattgt
cttcatctaagatgttggggatgcctcacctacatgtgaaagggcttggg
gctttgctcatacatttgtgatgctcacaaatctatggacagctacttga
ctagggtctggtgctgggagcaggcaaagatcgtatcttcccttcagagt
ctccattgcttctagcctttagcttgacatctcacagtccactgccccac
agtagcacacatctttaatatcagccctctgtaagtggagatagatggat
ctttgtgacttcaagtccacagtgtaaaagaaaatgtaatttcagaattc
taaggaactgaccattaaacaaaaaactgtgaagagtgtagaagtcaaaa
agaggaagttgaaaagatatattttataaatgttttctgttttatttgtc
aattccctcgagatgaaaaacaataattaaaagttctatggtgatactat
gtgtaacaatgctttggtaatatacgttatgattattgttatcaatacat
tttattgacatgtatttttatttatttaaatatttatatttgttataaat
gcatatttatatacatatgttatgtgtaaattacatttgtcttttttctt
gtactatgactattaagaacttactgtaatatgtaatatttttaaatatc
cacctttttgaaagatttcacataatttcacttagacatattttaaagat
taattttcatttgtttatttatttaattttatgtatttagtgtgtgtgtg
tgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_17867211_17868298
seq2: B6Ng01-070P24.b_48_1132 (reverse)

seq1  AACTGCCTTTAGTCCTTATAT-AGA-TTTATATATGTTGCTTAAAAAACA  48
      ||||||||||||||| ||||| ||| ||||||||||||||||||||||||
seq2  AACTGCCTTTAGTCC-TATATAAGATTTTATATATGTTGCTTAAAAAACA  49

seq1  TAAATGAATTTTGGTTTTAGATTTATGACCCATTTTCAAG-AAATCGTGT  97
      |||||||  ||||  ||||||||||||||||| ||||||| |||||||||
seq2  TAAATGA--TTTG--TTTAGATTTATGACCCA-TTTCAAGAAAATCGTGT  94

seq1  TCTGTGTATACACATATTCTAAATTCTTGGCAAACAATATTTAACACTTT  147
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTGTGTATACACATATTCTAAATTCTTGGCAAACAATATTT-ACACTTT  143

seq1  TGGCCCAAAACAGTTTTGAGAAGTGATAATCTATTCTAGTAGAAATTCAT  197
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAAAACAG-TTTGAGAAGTGATAATCTATTCTAGTAGAAATTCAT  192

seq1  TCAATTATATATGAGTACTTGTTAAGTTCTAGAATTT-AAAATATTGTAC  246
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAATTATATATGAGTACTTGTTAAGTTCTAGAATTTAAAAATATTGTAC  242

seq1  TCTTTTATGAATTTGTATTCTT-AAAATGAACTAAAAACATCTCTAAAAT  295
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTTTTATGAATTTGTATTCTTAAAAATGAACTAAAAACATCTCTAAAAT  292

seq1  GTGTAGACACATATACTTAATTTAAACTGAACACATTATGTGATAAATTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGACACATATACTTAATTTAAACTGAACACATTATGTGATAAATTC  342

seq1  AATTTTTCCAGTAGACCCAGTGTCATAAAAAAATAAAATTGTGAATCATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCCAGTAGACCCAGTGTCATAAAAAAATAAAATTGTGAATCATA  392

seq1  GGAACTACCCCCCAACACACAAACACACAAAAGGTTTTGTTGACATAGCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTACCCCCCAACACACAAACACACAAAAGGTTTTGTTGACATAGCC  442

seq1  ATAGGCAAAAATGAAAGTTGGTTGCTAAACGGACAATTCATCTTAATGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAAAAATGAAAGTTGGTTGCTAAACGGACAATTCATCTTAATGAA  492

seq1  TTAATTATATGAGAAAAACCAAACTACCTTAGTTTCCATAGGATATCTAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATATGAGAAAAACCAAACTACCTTAGTTTCCATAGGATATCTAT  542

seq1  GATGGCGAATCTTGGTTGTCAGTCTGAGAATCCTGGAAAAGAGAACTGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGAATCTTGGTTGTCAGTCTGAGAATCCTGGAAAAGAGAACTGAT  592

seq1  TTGTGTAACCACCTCTATCAGAGTGGCCTGTGGGTCATCTTTTAAGTTGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAACCACCTCTATCAGAGTGGCCTGTGGGTCATCTTTTAAGTTGT  642

seq1  TAGTTCATGTAGGAATGCCCATTAAACTGTGAACAGTACCATATGTGGCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATGTAGGAATGCCCATTAAACTGTGAACAGTACCATATGTGGCC  692

seq1  AATGTAAGGCATAAACTGAACAATCCACAGAGGGCAAGCCAGAGTGAGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGGCATAAACTGAACAATCCACAGAGGGCAAGCCAGAGTGAGTG  742

seq1  GTTTTTCTCCATCATCTCTGCTTTCATTACTGCTCCCACGTGCTTCCCTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTCCATCATCTCTGCTTTCATTACTGCTCCCACGTGCTTCCCTT  792

seq1  TGTGTCCTACCCAGCTTCCTTTCATGATAGACAATAATATGTTAGATAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCTACCCAGCTTCCTTTCATGATAGACAATAATATGTTAGATAAG  842

seq1  ATTCCCAAGACGATTTTGGTCTTTTTTTTTCTACAACAAAAAAGGAGAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAAGACGATTTTGGTCTTTTTTTTTCTACAACAAAAAAGGAGAAA  892

seq1  AGTAGCTGGGCGGGGGTGGTGCACACCTTTAGTCCCAGCACTTGCGAGGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTGGGCGGGGGTGGTGCACACCTTTAGTCCCAGCACTTGCGAGGC  942

seq1  AGAGGCAGGCAGATCTCTGAGTTCGAGGTCAGCCTGGTCTACAGAGTGAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCAGATCTCTGAGTTCGAGGTCAGCCTGGTCTACAGAGTGAA  992

seq1  TTCCAGGACAGCCAGAGCTACGCAGAGAAACCCTGTCTCAAAAACCAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGACAGCCAGAGCTACGCAGAGAAACCCTGTCTCAAAAACCAAAA  1042

seq1  AAAAAAAAAAAAAAAAAAAAAGGAGAAAACTAGAAGAGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAGGAGAAAACTAGAAGAGAATTC  1085

seq1: chr4_17756554_17757371
seq2: B6Ng01-070P24.g_68_885

seq1  GAATTCTGTTTTGAGCCTTCTTTCTATGGTAATATCTCTTTTCCTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTGAGCCTTCTTTCTATGGTAATATCTCTTTTCCTATTGT  50

seq1  CTTCATCTAAGATGTTGGGGATGCCTCACCTACATGTGAAAGGGCTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTAAGATGTTGGGGATGCCTCACCTACATGTGAAAGGGCTTGGG  100

seq1  GCTTTGCTCATACATTTGTGATGCTCACAAATCTATGGACAGCTACTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTCATACATTTGTGATGCTCACAAATCTATGGACAGCTACTTGA  150

seq1  CTAGGGTCTGGTGCTGGGAGCAGGCAAAGATCGTATCTTCCCTTCAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTCTGGTGCTGGGAGCAGGCAAAGATCGTATCTTCCCTTCAGAGT  200

seq1  CTCCATTGCTTCTAGCCTTTAGCTTGACATCTCACAGTCCACTGCCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGCTTCTAGCCTTTAGCTTGACATCTCACAGTCCACTGCCCCAC  250

seq1  AGTAGCACACATCTTTAATATCAGCCCTCTGTAAGTGGAGATAGATGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCACACATCTTTAATATCAGCCCTCTGTAAGTGGAGATAGATGGAT  300

seq1  CTTTGTGACTTCAAGTCCACAGTGTAAAAGAAAATGTAATTTCAGAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGACTTCAAGTCCACAGTGTAAAAGAAAATGTAATTTCAGAATTC  350

seq1  TAAGGAACTGACCATTAAACAAAAAACTGTGAAGAGTGTAGAAGTCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAACTGACCATTAAACAAAAAACTGTGAAGAGTGTAGAAGTCAAAA  400

seq1  AGAGGAAGTTGAAAAGATATATTTTATAAATGTTTTCTGTTTTATTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGTTGAAAAGATATATTTTATAAATGTTTTCTGTTTTATTTGTC  450

seq1  AATTCCCTCGAGATGAAAAACAATAATTAAAAGTTCTATGGTGATACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTCGAGATGAAAAACAATAATTAAAAGTTCTATGGTGATACTAT  500

seq1  GTGTAACAATGCTTTGGTAATATACGTTATGATTATTGTTATCAATACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACAATGCTTTGGTAATATACGTTATGATTATTGTTATCAATACAT  550

seq1  TTTATTGACATGTATTTTTATTTATTTAAATATTTATATTTGTTATAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGACATGTATTTTTATTTATTTAAATATTTATATTTGTTATAAAT  600

seq1  GCATATTTATATACATATGTTATGTGTAAATTACATTTGTCTTTTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTATATACATATGTTATGTGTAAATTACATTTGTCTTTTTTCTT  650

seq1  GTACTATGACTATTAAGAACTTACTGTAATATGTAATATTTTTAAATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATGACTATTAAGAACTTACTGTAATATGTAATATTTTTAAATATC  700

seq1  CACCTTTTTGAAAGATTTCACATAATTTCACTTAGACATATTTTAAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTTGAAAGATTTCACATAATTTCACTTAGACATATTTTAAAGAT  750

seq1  TAATTTTCATTTGTTTATTTATTTAATTTTATGTATTTAGTGTGTGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCATTTGTTTATTTATTTAATTTTATGTATTTAGTGTGTGTGTG  800

seq1  TGTGTGTGTGTGTGTGTG  818
      ||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTG  818