BAC Information

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BAC

Clone NameB6Ng01-071F13
Chromosome4 (Build37)
Map Location 141,641,030 - 141,812,487
singlet/doubletdoublet
Overlap gene9030409G11Rik
Upstream geneLOC638991, Spata21, D4Ertd22e, Fbxo42, 6330545A04Rik, Arhgef19, Epha2, Gm693, Clcnka, Clcnkb, Hspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik, Fblim1, BC025833, Slc25a34, Plekhm2, Ddi2, Agmat, Dnajc16, Casp9, Ela2a, Ctrc, Efhd2, Fhad1, Tmem51
Downstream geneEG665983, LOC546484, 6330411D24Rik, Prdm2, LOC666018, EG626575
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071F13.bB6Ng01-071F13.g
ACCDH889073DH889074
length1,221957
definitionDH889073|Mus musculus domesticus DNA, BAC clone: B6Ng01-071F13, 5' end.DH889074|Mus musculus domesticus DNA, BAC clone: B6Ng01-071F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,811,240 - 141,812,487)(141,641,030 - 141,641,856)
sequence
gaattctccaggatggccaagaaaaaagaggtcatgtggttttaccatag
caggatgataaaggggagtctactgtccccagatgtgaacatgaagtctc
actccaaagacagatgcctacgtgtgtaaacaccaggaccttgcatatcc
tcttcctcccagtcctcccagtcctcccagtcctcccccagatgcaaatc
gtgatccagttttctatcagatcttgtcttctttttcaagagaaatcaga
aaccccatcttttctgcaatatctcccaaatcttgaattttggcacctaa
tgagaattggggtttttcttttaattgcagggaaaacaaaatatgtctgt
gagtcaagtgtgcactgccagcttccagttctgagagctgccctctggct
cagcttccacatggacgcccatgaagctcacatcctcttagggaccatga
gcaagcaagcttctcccgtctcactccgagcaggctctgcccacatcggc
caccccagggcccttttgaagtccaagatgttgaagccagaggggtctaa
attcctacgggagaagcaatatgtgtagtaccagagggaggaagtctaga
agcctgtattcctgcctgactctagcattggcttgccatgtgacttggac
aagcacttccccttgccaggccccaggttctttaagatagagaagctgtt
gtcagatgcaagctttctatattcctggaacttatctgggaattatttct
tgacccagggtgctagtgcccagcaggcatctttgtccctagctgaaccc
cagcgtggacaagctgccttcccatcctggctctgaaatcctatgcttca
gtgaagaaggggttccccctggtgtctctgtctctgcataagggttcatg
atggaaacacagggtggtggtggtcctggcagatcattctttaggctctg
ctggtgctgatggtgaacttctgctagaggagcacgggtggctcagtggc
caaatctgtcctgccccacttcccagtagtgctctgcactgactgttgat
cgagataatagctgggggtaggaacggatgctacccagcgactccattgt
tgttgctttcgttacagcggtttattgcagccatgctggtatgtgctgcc
atgttcaggctcacatcattagaggcataggacacccatcaactggttct
ctcttcacttgaggatctgga
gaattcctgggtacatacttcccgagctgtatacttccggagtccaatca
cactctatacactgctacttcttatttgcactgatagaaagggattaatt
gggaaatggcttgtgatttgggaagtgaaaagggcatttttggaaacagg
ttcggagcgcaagagtaactgctaacatttcacgtccttactctgaaccc
ggcctgggtgaccccacccccgccccgccccgcctcgcctcctgaacatt
ctccctcaacctctccacccggcacagcccgggcctatagtttgcatttc
accctgacagactcgaggcaggtcattcagagagtcccagaggtggaagc
aaggaatactggtacttttccatgccgggattcagctctagacctgcccc
tacaccgcatctaatctagctgggcaggtctgtctcttccaagcggggag
agaccaaggacttaacagccaaagctgagctgagaggaaaactaaaagag
tcgcatcgcacactgtccaaccttctgccttaatgtgtttcttttttctt
acctcttcccacccaggagctgcctgcctccttatcccaccacgctgcta
cctcaccaggaccggaggcatgtgtccttaggggaaacgatccaaagatg
cgaatctcaaacagtgacttctattacctattgtgctgtctagttttatg
tgagcttgacacaagttatagttatatttgttgagggattctcaactgag
aaaatgcctccataagatcaggctgtgggcaagtctgtggggcattttct
ttatttagtgattagtagggtgtgtgtgaatgaactttgctgagcaagaa
attatgattgcactcactataaatagcttatctagaaaatgcctgaaata
aattttagaaatgaaagcacctctatagtgaaaattgtaaacactgtgga
aattgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_141811240_141812487
seq2: B6Ng01-071F13.b_41_1261 (reverse)

seq1  TCCAGAATCCTCATGGTGGAAGAGAGAACCAATGTTTGATGGTTGTCCTC  50
      ||||| ||||||| |   |||||||||||||    ||||||| |||||| 
seq2  TCCAG-ATCCTCAAG--TGAAGAGAGAACCA---GTTGATGGGTGTCCTA  44

seq1  TGACATCT-ATAGTATGACGCTGACAATGTGCACACACATACACAAGCAT  99
      || | ||| ||  | |||  ||||  ||| |||  |||||  || |||||
seq2  TG-CCTCTAATGATGTGAGCCTGAACATG-GCA-GCACAT--ACCAGCAT  89

seq1  GCACGCAATAAACACATGTAACAAAAATTAAACAAACAATGGAGTTGCTG  149
      |   |||||||||   |||||| |||    ||| ||||||||||| ||||
seq2  GGCTGCAATAAACCGCTGTAACGAAA--GCAAC-AACAATGGAGTCGCTG  136

seq1  GGTAACACTGTTTCCTTACCCCCAGGTATTATCCTCATCAACAGGCCAGT  199
      |||| ||    |||| ||||||||| |||||||   ||||||| | ||||
seq2  GGTAGCATCCGTTCC-TACCCCCAGCTATTATCTCGATCAACA-GTCAGT  184

seq1  GCAAGAGCACTCACTGGGAAATGGGGCAGGGACAGATTTGGCCACCTGAG  249
      || |||||||| |||||||| ||||||| ||||||||||||||| |||||
seq2  GC-AGAGCACT-ACTGGGAAGTGGGGCA-GGACAGATTTGGCCA-CTGAG  230

seq1  CCACCCCGTGGCTCCTCCTAGCAGGAGTTTCACCATCAGCACCAGCAGGA  299
      ||| ||||| |||||| ||||||| || ||||||||||||||||||| ||
seq2  CCA-CCCGT-GCTCCT-CTAGCAGAAG-TTCACCATCAGCACCAGCA-GA  275

seq1  GCCTAAAGAATGATCTTGCCAGGACCACCACCACCCTGTGTTTCCATCCT  349
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  GCCTAAAGAATGATC-TGCCAGGACCACCACCACCCTGTGTTTCCATCAT  324

seq1  GAACCCTTTATTGCAGAGACAGAGACACCAGGGGGAACCCCTTCTTCACT  399
      ||||||||   |||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTT--ATGCAGAGACAGAGACACCAGGGGGAACCCCTTCTTCACT  372

seq1  GAAGCATAGGATTTCAGAGCCAGGATGGGAAGGCAGCTTGTCCACGCTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATAGGATTTCAGAGCCAGGATGGGAAGGCAGCTTGTCCACGCTGG  422

seq1  GGTTCAGCTAGGGACAAAGATGCCTGCTGGGCACTAGCACCCTGGGTCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGCTAGGGACAAAGATGCCTGCTGGGCACTAGCACCCTGGGTCAA  472

seq1  GAAATAATTCCCAGATAAGTTCCAGGAATATAGAAAGCTTGCATCTGACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATTCCCAGATAAGTTCCAGGAATATAGAAAGCTTGCATCTGACA  522

seq1  ACAGCTTCTCTATCTTAAAGAACCTGGGGCCTGGCAAGGGGAAGTGCTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCTCTATCTTAAAGAACCTGGGGCCTGGCAAGGGGAAGTGCTTG  572

seq1  TCCAAGTCACATGGCAAGCCAATGCTAGAGTCAGGCAGGAATACAGGCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTCACATGGCAAGCCAATGCTAGAGTCAGGCAGGAATACAGGCTT  622

seq1  CTAGACTTCCTCCCTCTGGTACTACACATATTGCTTCTCCCGTAGGAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTTCCTCCCTCTGGTACTACACATATTGCTTCTCCCGTAGGAATT  672

seq1  TAGACCCCTCTGGCTTCAACATCTTGGACTTCAAAAGGGCCCTGGGGTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCCTCTGGCTTCAACATCTTGGACTTCAAAAGGGCCCTGGGGTGG  722

seq1  CCGATGTGGGCAGAGCCTGCTCGGAGTGAGACGGGAGAAGCTTGCTTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGTGGGCAGAGCCTGCTCGGAGTGAGACGGGAGAAGCTTGCTTGCT  772

seq1  CATGGTCCCTAAGAGGATGTGAGCTTCATGGGCGTCCATGTGGAAGCTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCCCTAAGAGGATGTGAGCTTCATGGGCGTCCATGTGGAAGCTGA  822

seq1  GCCAGAGGGCAGCTCTCAGAACTGGAAGCTGGCAGTGCACACTTGACTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGGGCAGCTCTCAGAACTGGAAGCTGGCAGTGCACACTTGACTCA  872

seq1  CAGACATATTTTGTTTTCCCTGCAATTAAAAGAAAAACCCCAATTCTCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATATTTTGTTTTCCCTGCAATTAAAAGAAAAACCCCAATTCTCAT  922

seq1  TAGGTGCCAAAATTCAAGATTTGGGAGATATTGCAGAAAAGATGGGGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCCAAAATTCAAGATTTGGGAGATATTGCAGAAAAGATGGGGTTT  972

seq1  CTGATTTCTCTTGAAAAAGAAGACAAGATCTGATAGAAAACTGGATCACG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCTCTTGAAAAAGAAGACAAGATCTGATAGAAAACTGGATCACG  1022

seq1  ATTTGCATCTGGGGGAGGACTGGGAGGACTGGGAGGACTGGGAGGAAGAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATCTGGGGGAGGACTGGGAGGACTGGGAGGACTGGGAGGAAGAG  1072

seq1  GATATGCAAGGTCCTGGTGTTTACACACGTAGGCATCTGTCTTTGGAGTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCAAGGTCCTGGTGTTTACACACGTAGGCATCTGTCTTTGGAGTG  1122

seq1  AGACTTCATGTTCACATCTGGGGACAGTAGACTCCCCTTTATCATCCTGC  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCATGTTCACATCTGGGGACAGTAGACTCCCCTTTATCATCCTGC  1172

seq1  TATGGTAAAACCACATGACCTCTTTTTTCTTGGCCATCCTGGAGAATTC  1248
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAAAACCACATGACCTCTTTTTTCTTGGCCATCCTGGAGAATTC  1221

seq1: chr4_141641030_141641856
seq2: B6Ng01-071F13.g_66_893

seq1  GAATTCCTGGGTACATACTTCCCGAGCTGTATACTTCCGGAGTCCAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGTACATACTTCCCGAGCTGTATACTTCCGGAGTCCAATCA  50

seq1  CACTCTATACACTGCTACTTCTTATTTGCACTGATAGAAAGGGATTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTATACACTGCTACTTCTTATTTGCACTGATAGAAAGGGATTAATT  100

seq1  GGGAAATGGCTTGTGATTTGGGAAGTGAAAAGGGCATTTTTGGAAACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGGCTTGTGATTTGGGAAGTGAAAAGGGCATTTTTGGAAACAGG  150

seq1  TTCGGAGCGCAAGAGTAACTGCTAACATTTCACGTCCTTACTCTGAACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGAGCGCAAGAGTAACTGCTAACATTTCACGTCCTTACTCTGAACCC  200

seq1  GGCCTGGGTGACCCCACCCCCGCCCCGCCCCGCCTCGCCTCCTGAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGGTGACCCCACCCCCGCCCCGCCCCGCCTCGCCTCCTGAACATT  250

seq1  CTCCCTCAACCTCTCCACCCGGCACAGCCCGGGCCTATAGTTTGCATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCAACCTCTCCACCCGGCACAGCCCGGGCCTATAGTTTGCATTTC  300

seq1  ACCCTGACAGACTCGAGGCAGGTCATTCAGAGAGTCCCAGAGGTGGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGACAGACTCGAGGCAGGTCATTCAGAGAGTCCCAGAGGTGGAAGC  350

seq1  AAGGAATACTGGTACTTTTCCATGCCGGGATTCAGCTCTAGACCTGCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATACTGGTACTTTTCCATGCCGGGATTCAGCTCTAGACCTGCCCC  400

seq1  TACACCGCATCTAATCTAGCTGGGCAGGTCTGTCTCTTCCAAGCGGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCGCATCTAATCTAGCTGGGCAGGTCTGTCTCTTCCAAGCGGGGAG  450

seq1  AGACCAAGGACTTAACAGCCAAAGCTGAGCTGAGAGGAAAACTAAAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGGACTTAACAGCCAAAGCTGAGCTGAGAGGAAAACTAAAAGAG  500

seq1  TCGCATCGCACACTGTCCAACCTTCTGCCTTAATGTGTTTCTTTTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATCGCACACTGTCCAACCTTCTGCCTTAATGTGTTTCTTTTTTCTT  550

seq1  ACCTCTTCCCACCCAGGAGCTGCCTGCCTCCTTATCCCACCACGCTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTCCCACCCAGGAGCTGCCTGCCTCCTTATCCCACCACGCTGCTA  600

seq1  CCTCACCAGGACCGGAGGCATGTGTCCTTAGGGGAAACGATCCAAAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCAGGACCGGAGGCATGTGTCCTTAGGGGAAACGATCCAAAGATG  650

seq1  CGAATCTCAAACAGTGACTTCTATTACCTATTGTGCTGTCTAGTTTTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATCTCAAACAGTGACTTCTATTACCTATTGTGCTGTCTAGTTTTATG  700

seq1  TGAGCTTGACACAAGTTATAGTTATATTTGTTGAGGGATTCTCAACTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGACACAAGTTATAGTTATATTTGTTGAGGGATTCTCAACTGAG  750

seq1  AAAATGCCTCCATAAGATCAGGCTGTGGGCAAGTCTGTGGGGCATTTTC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAATGCCTCCATAAGATCAGGCTGTGGGCAAGTCTGTGGGGCATTTTCT  800

seq1  TTAATTAGTGATTAGTAGGGTGTGTGTG  827
      ||| ||||||||||||||||||||||||
seq2  TTATTTAGTGATTAGTAGGGTGTGTGTG  828