BAC Information

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BAC

Clone NameB6Ng01-072L15
Chromosome4 (Build37)4 (Build37)
Map Location 146,766,066 - 146,766,992147,129,490 - 147,130,296
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588
Downstream geneLOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072L15.bB6Ng01-072L15.g
ACCDH890060DH890061
length1,2081,073
definitionDH890060|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L15, 5' end.DH890061|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(146,766,066 - 146,766,992)(147,129,490 - 147,130,296)
sequence
gaattcatacaggagagaaaccttacaaatgtagtgaatgtgacaaatgc
tttactaaaaaatccagtttgaggattcatcagagatttcatacaggaga
gaaaccttacaaatgtagtgaatgtgacaaatgttttattcaaaaatgca
gtatgataattcatcagagaattcatacaggagagaaaccttacaaatgt
agtgaatgtgacaaagctttactgagaaagtcagatggcatcagagaact
catacaggggagaattcttacagatgtattgaatgtgacaaatgttttgc
ccagaaatcctatcttgtttttaatcacagaaatcatacattaaagaagc
cttacaaatgtagtcaatgtgacaaatgattttcccacaaacttagtctg
agaatgcatcagagaattcatacagtagagaaaatttacaaaaatgcagt
gaatgtgataaatgctttactaataaaggcagactgagaattaatcagat
aatttatacatttaaaaaaaaaccttacaagtattttgtatgtgataaat
gcagtacccacaacatcagtctgacaaatcaacaaatatttcaaacagta
gagcaacattataaatgaaatgaatgagataatcctttaacaagaaatat
catcttaaaattcactggagaattcttccaaaagggaaacttttcaaata
cattgatggtttgaatcctttattttggcctatctcttagaatgtaacag
ataatttatacaggcaagaatcttaacaaatataatatatgctgaaatat
ctttgacttcatttcagtgcagaaaaaatatgtaaaatattttttatggg
aaaaatagttctcctggggaaatgtggcatatgttttacacgggtaatat
tcttttcaacagttagtgctctaaactagagaattatgaatctgaaaact
tttgaaaaccttcatgcaatgttcaaatcttagataatgtcaactaataa
tgctggcagtaactctgaatatatgatattgagaaacatttttcattaaa
ctttttacttgttcaccctcaatattatatgatgaagtcaggtggtgaaa
gccagaagaatatgaatgttgttgcaacaattcatggagatagaattgat
cattcaaggaactaataagagttacttatcgcttcaatgtctataaactg
cagcattt
gaattctctgatgaattctcagactgcttttttcagtaaagcatttgtca
cattcactgcatttataaggtttctctcctgtatgaattctctgatgaat
actaagatggaattttcgggtaaagcatttgtcacattcactacatttgt
aaggtttctctcctgtatgaattctctgatgactattaagatgggatttg
tgggtaaagcatttgtcacattcactacatttgtaaggtttctctcctgt
atgaattctctgatgaacgctaagatgagatttttgggtaaagcatttgt
cacattcactgcatttgtaaggtttctctcctgtatgaattctctgatga
ctattaagatgggatttgtgggtaaaggatttgtcacattcactacattt
gtaaggtttctctcctgtatgaattctctgatgcatactaaaactgaatt
tgtgtttaaaacatttgtcacattcactgcatttgtaagggttctctcct
gtatgaattctctgatgaatattaagataggatttgtgggtaaagcattt
gtcacattcactacatttgtaaattttctcttctgcatgaattccctgat
ggatactaagatggatctgatgggtaaagcatttgtcacttttactactt
ctgtaaggtttctttccatgataaattctctgctgactttgaagtttttc
tctctgggtaagatatttgtcaaattcactacatttgtaagggttcactc
cagtattgttccgtttcaccatgactttatgtttagaaacaaaaaccttc
gcaaattctgcatttcggttgtgttttttcttctgcatgtggattccttg
attgagactaatggtagaaaacaaacttacactgtttacagagtcattgt
atttgcaaacttctttagtgttcctgggcttaagtctttttttgtcggat
tttgaagaaagccgtgattagtttttgtaaggtgtacatgggggggatcc
agaatcaccttgctaaacttgtccaattagaagactctccttgaatattc
tggtgttcatgacaagtactggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146766066_146766992
seq2: B6Ng01-072L15.b_336_1252

seq1  ATGTTTTGCCCAGAAATCCTATCTTGTTTTTAATCACAGAAATCATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGCCCAGAAATCCTATCTTGTTTTTAATCACAGAAATCATACAT  50

seq1  TAAAGAAGCCTTACAAATGTAGTCAATGTGACAAATGATTTTCCCACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGCCTTACAAATGTAGTCAATGTGACAAATGATTTTCCCACAAA  100

seq1  CTTAGTCTGAGAATGCATCAGAGAATTCATACAGTAGAGAAAATTTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTGAGAATGCATCAGAGAATTCATACAGTAGAGAAAATTTACAA  150

seq1  AAATGCAGTGAATGTGATAAATGCTTTACTAATAAAGGCAGACTGAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGTGAATGTGATAAATGCTTTACTAATAAAGGCAGACTGAGAAT  200

seq1  TAATCAGATAATTTATACATTTAAAAAAAAACCTTACAAGTATTTTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGATAATTTATACATTTAAAAAAAAACCTTACAAGTATTTTGTAT  250

seq1  GTGATAAATGCAGTACCCACAACATCAGTCTGACAAATCAACAAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAATGCAGTACCCACAACATCAGTCTGACAAATCAACAAATATTT  300

seq1  CAAACAGTAGAGCAACATTATAAATGAAATGAATGAGATAATCCTTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTAGAGCAACATTATAAATGAAATGAATGAGATAATCCTTTAAC  350

seq1  AAGAAATATCATCTTAAAATTCACTGGAGAATTCTTCCAAAAGGGAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATCATCTTAAAATTCACTGGAGAATTCTTCCAAAAGGGAAACT  400

seq1  TTTCAAATACATTGATGGTTTGAATCCTTTATTTTGGCCTATCTCTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATACATTGATGGTTTGAATCCTTTATTTTGGCCTATCTCTTAGA  450

seq1  ATGTAACAGATAATTTATACAGGCAAGAATCTTAACAAATATAATATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACAGATAATTTATACAGGCAAGAATCTTAACAAATATAATATATG  500

seq1  CTGAAATATCTTTGACTTCATTTCAGTGCAGAAAAAATATGTAAAATATT  550
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGAAATATCTTTGACTTCATTTCAGTGCAGAAAAAATATGTAAAATA-T  549

seq1  TTTTTATGGGAAAAAAAGTTCTCCTGGGGAAATGTGGCATATGTTTTACA  600
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTTATGGGAAAAATAGTTCTCCTGGGGAAATGTGGCATATGTTTTACA  599

seq1  CGGGTAATATTCTTTTCAACAGTTAGTGCTCTAAACTAGAGAATTATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTAATATTCTTTTCAACAGTTAGTGCTCTAAACTAGAGAATTATGAA  649

seq1  TCTGAAAACTTTTGAAAACCTTCATGCAATGTTCAAATCTTAGATAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACTTTTGAAAACCTTCATGCAATGTTCAAATCTTAGATAATGT  699

seq1  CAACT-ATTATGCTGGCAGTAACTCTGAATATATGATAATGAAGAAACA-  748
      ||||| || ||||||||||||||||||||||||||||| || ||||||| 
seq2  CAACTAATAATGCTGGCAGTAACTCTGAATATATGATATTG-AGAAACAT  748

seq1  TTTTCATTAAAC-TTTTACTTGTTCACCCTCAAATATTATATGATGAAGT  797
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  TTTTCATTAAACTTTTTACTTGTTCACCCTC-AATATTATATGATGAAGT  797

seq1  CAGGT-GTGAAAGCCAGAAGAATATG-ATGTTG-TGCAACAATTCATGGA  844
      ||||| |||||||||||||||||||| |||||| ||||||||||||||||
seq2  CAGGTGGTGAAAGCCAGAAGAATATGAATGTTGTTGCAACAATTCATGGA  847

seq1  GATAGAAATGATCCATTCCAAAAGGAAACTAAATAAAGAGTGTAC-TATC  893
      ||||||| |||| |||||   |||| ||||||   |||||| ||| ||||
seq2  GATAGAATTGAT-CATTC---AAGG-AACTAA--TAAGAGT-TACTTATC  889

seq1  GCCTTCAAAATGTCTAATAAAACTGGCAGCATTT  927
      | ||||  ||||||||   ||||| |||||||||
seq2  G-CTTC--AATGTCTA--TAAACT-GCAGCATTT  917

seq1: chr4_147129490_147130296
seq2: B6Ng01-072L15.g_336_1138

seq1  TAAGATGGGATTTGTGGGTAAAGCATTTGTCACATTCACTACATTTGTAA  50
      ||||||| ||||| |||||||||||||||||||||||||| |||||||||
seq2  TAAGATGAGATTTTTGGGTAAAGCATTTGTCACATTCACTGCATTTGTAA  50

seq1  GGTTTCTCTCCTGTATGAATTCTCTGATGAACGCTAAGATGAGATTTTTG  100
      ||||||||||||||||||||||||||||||    ||||||| ||||| ||
seq2  GGTTTCTCTCCTGTATGAATTCTCTGATGACTATTAAGATGGGATTTGTG  100

seq1  GGTAAAGCATTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGTAT  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGGATTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGTAT  150

seq1  GAATTCTCTGATGCATACTAAAACTGAATTTGTGTTTAAAACATTTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATGCATACTAAAACTGAATTTGTGTTTAAAACATTTGTCA  200

seq1  CATTCACTGCATTTGTAAGGGTTCTCTCCTGTATGAATTCTCTGATGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTGCATTTGTAAGGGTTCTCTCCTGTATGAATTCTCTGATGAAT  250

seq1  ATTAAGATGGGATTTGTGGGTAAAGCATTTGTCACATTCACTACATTTGT  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATAGGATTTGTGGGTAAAGCATTTGTCACATTCACTACATTTGT  300

seq1  AAATTTTCTCTTCTGCATGAATTCCCTGATGGATACTAAGATGGATCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTCTTCTGCATGAATTCCCTGATGGATACTAAGATGGATCTGA  350

seq1  TGGGTAAAGCATTTGTCACTTTTACTACTTCTGTAAGGTTTCTTTCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAAGCATTTGTCACTTTTACTACTTCTGTAAGGTTTCTTTCCATG  400

seq1  ATAAATTCTCTGCTGACTTTGAAGTTTTTCTCTCTGGGTAAGATATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCTCTGCTGACTTTGAAGTTTTTCTCTCTGGGTAAGATATTTGT  450

seq1  CAAATTCACTACATTTGTAAGGGTTCACTCCAGTATTGTTTCGTTTCACC  500
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAAATTCACTACATTTGTAAGGGTTCACTCCAGTATTGTTCCGTTTCACC  500

seq1  ATGACTTTATGTTTAGAAACAAAAACCTTCTCAAATTCTGCATTTCGGTT  550
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGACTTTATGTTTAGAAACAAAAACCTTCGCAAATTCTGCATTTCGGTT  550

seq1  GTGTTTTTTCTTCTGCAGGTGGATTCCTTGATTGAGACTAATGGTAGAAA  600
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTGTTTTTTCTTCTGCATGTGGATTCCTTGATTGAGACTAATGGTAGAAA  600

seq1  ACAAACTTACACTGTTTACAGAGTCATTGTATTTGCAAACTTCTTTAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTACACTGTTTACAGAGTCATTGTATTTGCAAACTTCTTTAGTG  650

seq1  TTCCTGGGCTTAAGTCTTTTTTGGTTCGAGTATTGAAGAGAGCTGTGATT  700
      |||||||||||||||||||||| | |||  | ||||||| ||| ||||||
seq2  TTCCTGGGCTTAAGTCTTTTTTTG-TCGGATTTTGAAGAAAGCCGTGATT  699

seq1  AG-TTTTGTAAGGTGTACATTGGGGGGATTCAAGAATCACCTTGATAAGC  749
      || ||||||||||||||||| ||||||| || |||||||||||| ||| |
seq2  AGTTTTTGTAAGGTGTACATGGGGGGGA-TCCAGAATCACCTTGCTAAAC  748

seq1  TTGTCCCATTTAGAAGACTTCTCTTGAATATTCACGTGTTCATGGACAAT  799
      |||| ||| ||||||||||   |||||||||||  |||||||| ||||| 
seq2  TTGT-CCAATTAGAAGACTCTCCTTGAATATTCTGGTGTTCAT-GACAA-  795

seq1  GTACTGGC  807
      ||||||||
seq2  GTACTGGC  803