BAC Information

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BAC

Clone NameB6Ng01-075L16
Chromosome4 (Build37)
Map Location 9,548,390 - 9,656,243
singlet/doubletdoublet
Overlap geneAsph
Upstream geneEG666752, LOC666760, Chd7, LOC666782, LOC100039584, 4933402J24Rik
Downstream geneGdf6, 4930448K20Rik, LOC666840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L16.bB6Ng01-075L16.g
ACCDH892206DH892207
length1,045888
definitionDH892206|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L16, 5' end.DH892207|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,655,676 - 9,656,243)(9,548,390 - 9,549,271)
sequence
gaattctgcacagtggctgcttctaatagttactcctctttccctgagag
ctatctttaagcctttgatgaaggctgcctctttagtcaaagtcctcgag
aggagggtaaattgacttaattttttgttcttcattttttatattatcct
ttatatctttatattatcctttgtatctttacattttatattatcctttg
tatctttatattttagcttcctttcttttttttctttttatatttcttaa
gttacttatttttctgcgcgtgtcttctttttcctttctctctgtttctg
atatgccttcctggtactcctacaaagtcgctgcccttccttaacagctg
gtcccacacaaacccagcaacaattaccagacccactgcgtaagaaagca
tacctctcagagacttaccttaatttctttatacttactggtaccaccgt
tcctcagctgaagagttctgaatccacgcagttgaatccttctcagcagt
ctgttttgcaggaacctttattaacaccgctccccagctgaagagttctg
aatccacgccggatccttctcagcagtctgttttacgggaacctttatta
accgctccttccccgcgatgcagttctgaatcctccctgtagtagggggt
cttcgctcgtgcctgaagatgtttcttgtcccgggttttcggcaccactt
cttgcgcgcgctcgactcgaccagcaagaacgacgctgcaacaggatcct
tctgcacacgtttattgggagagcttgattgcagaggcgaaaagactttt
tgcccagagctggtgctgcttttataggcctaggagaggcgtgtctcata
ccctgattggttatgcactaagcctcatttgcatgttcctcatctgattg
gctactctctctcagtacctcactgagcctcattatcatacctcatttgc
atgtctcacatccgattggttatactctcagtaccttacagaacctcatc
atcatgcctgggccaggcagtgtttttgcaaaaacttactgcata

gaattcagaaagatgtgtccggagtgggctgaacaggctctcggtttatc
cttattgtttatgtaatgaaaggaaggtgtgaaaacaggaagctgggtaa
gaagaggaagggcaactaaggccgctaaggggacaggaaggtaggagata
aggtgtgaggcacgagctcaacctggacagatggagcctaaagggcaaag
gcctaacaaatgaggagggaggtgacagacagtagcctggggctgccatg
ggcaagctgggagcaggaagggaggaggcagggaagaccctgcctggctg
agtccctcgctgcacattaatacttctcatgctctccagactctttctta
cttacctcaatacaggatttaataaaggattaaaaccattacaattcaca
ctacgcacatagcaataaaaacaggtcattacattgtataacacaaactt
tcattttttttttttgaaactgagaagatgacaaagtatacttgattcac
agaatttacttattgagcaccaataaacacatccagtggctaatatggat
cattttcccagtcggagcaatcccagatttcctctgccctttagcagcga
actggagtgaggaaggtgagtcatttctgacaggccttcagttcttttct
cttctggccattttccttggcgacatgagcatgcccagaggagcttcttc
ctcgcctgtcttttgtctctggcagccactttactagaaacagcctttgt
ctctacggccttcttccagctttcctttagacttgggaactcttgtcaga
gctggctttctccttgtctctgtctctcttcccctgcagcgggatgcttt
ctgggatgtgtctgagtcaggcttcttcctccccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_9655676_9656243
seq2: B6Ng01-075L16.b_48_615 (reverse)

seq1  AAGGATCCGGCGTGGATTCAGAACTCTTCAGCTGGGGAGCGGTGTTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCCGGCGTGGATTCAGAACTCTTCAGCTGGGGAGCGGTGTTAATA  50

seq1  AAGGTTCCTGCAAAACAGACTGCTGAGAAGGATTCAACTGCGTGGATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCCTGCAAAACAGACTGCTGAGAAGGATTCAACTGCGTGGATTCA  100

seq1  GAACTCTTCAGCTGAGGAACGGTGGTACCAGTAAGTATAAAGAAATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTTCAGCTGAGGAACGGTGGTACCAGTAAGTATAAAGAAATTAAG  150

seq1  GTAAGTCTCTGAGAGGTATGCTTTCTTACGCAGTGGGTCTGGTAATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCTCTGAGAGGTATGCTTTCTTACGCAGTGGGTCTGGTAATTGTT  200

seq1  GCTGGGTTTGTGTGGGACCAGCTGTTAAGGAAGGGCAGCGACTTTGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTTGTGTGGGACCAGCTGTTAAGGAAGGGCAGCGACTTTGTAGG  250

seq1  AGTACCAGGAAGGCATATCAGAAACAGAGAGAAAGGAAAAAGAAGACACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAGGAAGGCATATCAGAAACAGAGAGAAAGGAAAAAGAAGACACG  300

seq1  CGCAGAAAAATAAGTAACTTAAGAAATATAAAAAGAAAAAAAAGAAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGAAAAATAAGTAACTTAAGAAATATAAAAAGAAAAAAAAGAAAGGA  350

seq1  AGCTAAAATATAAAGATACAAAGGATAATATAAAATGTAAAGATACAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAATATAAAGATACAAAGGATAATATAAAATGTAAAGATACAAAG  400

seq1  GATAATATAAAGATATAAAGGATAATATAAAAAATGAAGAACAAAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATAAAGATATAAAGGATAATATAAAAAATGAAGAACAAAAAATT  450

seq1  AAGTCAATTTACCCTCCTCTCGAGGACTTTGACTAAAGAGGCAGCCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAATTTACCCTCCTCTCGAGGACTTTGACTAAAGAGGCAGCCTTCA  500

seq1  TCAAAGGCTTAAAGATAGCTCTCAGGGAAAGAGGAGTAACTATTAGAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGCTTAAAGATAGCTCTCAGGGAAAGAGGAGTAACTATTAGAAGC  550

seq1  AGCCACTGTGCAGAATTC  568
      ||||||||||||||||||
seq2  AGCCACTGTGCAGAATTC  568


seq1: chr4_9548390_9549271
seq2: B6Ng01-075L16.g_69_956

seq1  GAATTCAGAAAGATGTGTCCGGAGTGGGCTGAACAGGCTCTCGGTTTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGATGTGTCCGGAGTGGGCTGAACAGGCTCTCGGTTTATC  50

seq1  CTTATTGTTTATGTAATGAAAGGAAGGTGTGAAAACAGGAAGCTGGGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTTTATGTAATGAAAGGAAGGTGTGAAAACAGGAAGCTGGGTAA  100

seq1  GAAGAGGAAGGGCAACTAAGGCCGCTAAGGGGACAGGAAGGTAGGAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAAGGGCAACTAAGGCCGCTAAGGGGACAGGAAGGTAGGAGATA  150

seq1  AGGTGTGAGGCACGAGCTCAACCTGGACAGATGGAGCCTAAAGGGCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGAGGCACGAGCTCAACCTGGACAGATGGAGCCTAAAGGGCAAAG  200

seq1  GCCTAACAAATGAGGAGGGAGGTGACAGACAGTAGCCTGGGGCTGCCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAACAAATGAGGAGGGAGGTGACAGACAGTAGCCTGGGGCTGCCATG  250

seq1  GGCAAGCTGGGAGCAGGAAGGGAGGAGGCAGGGAAGACCCTGCCTGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCTGGGAGCAGGAAGGGAGGAGGCAGGGAAGACCCTGCCTGGCTG  300

seq1  AGTCCCTCGCTGCACATTAATACTTCTCATGCTCTCCAGACTCTTTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTCGCTGCACATTAATACTTCTCATGCTCTCCAGACTCTTTCTTA  350

seq1  CTTACCTCAATACAGGATTTAATAAAGGATTAAAACCATTACAATTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCAATACAGGATTTAATAAAGGATTAAAACCATTACAATTCACA  400

seq1  CTACGCACATAGCAATAAAAACAGGTCATTACATTGTATAACACAAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGCACATAGCAATAAAAACAGGTCATTACATTGTATAACACAAACTT  450

seq1  TCATTTTTTTTTTTTGAAACTGAGAAGATGACAAAGTATACTTGATTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTTTTTTTTGAAACTGAGAAGATGACAAAGTATACTTGATTCAC  500

seq1  AGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGAT  550

seq1  CATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTAGCAGCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTAGCAGCGA  600

seq1  ACTGGAGTGAGGAAGGTGAGTCATTTCTGACAGGCCTTCAGTTC-TTTCT  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTGGAGTGAGGAAGGTGAGTCATTTCTGACAGGCCTTCAGTTCTTTTCT  650

seq1  CTTCTGGCCATTTTCCTTGGCGACGTGAGCATGCCCAGAGGAGCTTCTTC  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTCTGGCCATTTTCCTTGGCGACATGAGCATGCCCAGAGGAGCTTCTTC  700

seq1  CTCGCCTGTC-TTTGTCTCTGGCAGCCACTTTACTAGAAACAGCCTTTGT  748
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCTGTCTTTTGTCTCTGGCAGCCACTTTACTAGAAACAGCCTTTGT  750

seq1  CTCTACGGCCTTCTTCCAGCTTTCC-TTAGACTT-GGAACTCTTGTCAGA  796
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  CTCTACGGCCTTCTTCCAGCTTTCCTTTAGACTTGGGAACTCTTGTCAGA  800

seq1  GCTGGCTTTCTCCTTGTCTCTGTCTCTCTT-CCCTGCAGC-GGATGCTTT  844
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  GCTGGCTTTCTCCTTGTCTCTGTCTCTCTTCCCCTGCAGCGGGATGCTTT  850

seq1  CTGGGATGTGTCTGAGTCAGGCTTCTTCCTCCCCTTCC  882
      ||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATGTGTCTGAGTCAGGCTTCTTCCTCCCCTTCC  888


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