BAC Information

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BAC

Clone NameB6Ng01-076J10
Chromosome7 (Build37)4 (Build37)
Map Location 68,330,967 - 68,331,50199,609,453 - 99,610,377
singlet/doubletsingletsinglet
Overlap geneD0Kist2
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, LOC100041248
Downstream geneLOC100041259, EG664943, B230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076J10.bB6Ng01-076J10.g
ACCDH892814DH892815
length922937
definitionDH892814|Mus musculus domesticus DNA, BAC clone: B6Ng01-076J10, 5' end.DH892815|Mus musculus domesticus DNA, BAC clone: B6Ng01-076J10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,330,967 - 68,331,501)(99,609,453 - 99,610,377)
sequence
gaattcccgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcagttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaattctgcactaaacctgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttctgatttttgttaat
taggatttttgtccctgtgcccgctagtgagtctagctaatgggtttatc
tatcttgttgattttctcaaagaaccaactcctcgtttggttaattcttt
gaatagttcttcttgtttccacttgggttgatttcacccctgagtttgat
tattcctgccgtctactcttcttgggtgaattgcttctttttttctagag
ctttaagatgtgttgtcaagct
gaattccaacacacatgacattgagtgtgtgtggccatctacaacataga
gaactatcttctcaaatttagctgacttcttccttttccactctctaatg
tcacatgggatgtgagatccgttttcctgcaggaaaatgctcaaatttgt
tttcggctgctctgaagaaaagtggctcagcacaaaatgtgttttttttc
caggttacagtggtggggtcatgggggaccagcggaagccccttgatatc
catgggctcacacgttactttcagagatgcattctcaggacagcattgta
aatgccaggttcccactctgggtggctgagaagcacagccggtctaagtg
actttaaacaggaaaagtgactttaaactccagggcacctggagtgaggc
cattttcaccactcctggattgaatgaaaactaattttggaatcatagtg
tgaaagaaggattaaaatccacaagagaaggtttctttctcttgatggtt
gctattaaaaagtggaagcggaactagatgcctataatctgaggaccagc
tagcctcgcaggggtcagtggggacagtagcccacatccagatcatatgg
gaagttatactgtactctagtgtgtgttccacaatagagtggaaggtgac
acttgagtatagccaaatcgctcttcagtcctttgcacagatatgtagaa
aacacgtaatccagtgtatttatctatagaggacagcaggaccaggctaa
cactcagagctgtgtagggagcagagctgagctagggcctgtggtctgtg
agtaacatggtgacagaactgcccgtgttgttgacatctccctcttcctt
tgtctgtctctgctgctgtctctgtctttctgtctgtctgtctctctctc
tggggtgtgtgtgtgtggtgggggggttgttgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68330967_68331501
seq2: B6Ng01-076J10.b_434_968 (reverse)

seq1  AGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACC  50
      ||||||||||||||||| ||||||||||||||||| ||||| ||||||||
seq2  AGCTTGACAACACATCTTAAAGCTCTAGAAAAAAA-GAAGC-AATTCACC  48

seq1  CAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAA-C  99
      ||||| |||||||||||||| ||||||||||||||||||||||||||| |
seq2  CAAGAAGAGTAGACGGCAGG-AATAATCAAACTCAGGGGTGAAATCAACC  97

seq1  CAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTG  147

seq1  GTTCTTTGAGAAAATCAACAAGATAGATAAACCC-TTAGCTAGACTCACT  198
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTCTTTGAGAAAATCAACAAGATAGATAAACCCATTAGCTAGACTCACT  197

seq1  AGAGGGCACAGAGAC-AAAATCCTAATTAAC-AAAATCAGAACTGAAAAG  246
      || |||||||| ||| ||||||||||||||| |||||||||| |||||||
seq2  AGCGGGCACAGGGACAAAAATCCTAATTAACAAAAATCAGAAATGAAAAG  247

seq1  GGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTT  297

seq1  CTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACA  347

seq1  AATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGAC  396
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATTTCTGGACAGATACCAGGTACC-AAGTTGAATCAGGATCAAGTTGAC  396

seq1  CTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATAAATAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATAAATAG  446

seq1  TCTCCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCT  496
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  TCTCCCAGCCAAAAAAAGCCCAGGACCAGACAGGTTTAGTGCAGAATTCT  496

seq1  ATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACA  535
      |||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACA  535

seq1: chr4_99609453_99610377
seq2: B6Ng01-076J10.g_70_1006

seq1  GAATTCCAACACACATGACATTGAGTGTGTGTGGCCATCTACAACATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACACACATGACATTGAGTGTGTGTGGCCATCTACAACATAGA  50

seq1  GAACTATCTTCTCAAATTTAGCTGACTTCTTCCTTTTCCACTCTCTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATCTTCTCAAATTTAGCTGACTTCTTCCTTTTCCACTCTCTAATG  100

seq1  TCACATGGGATGTGAGATCCGTTTTCCTGCAGGAAAATGCTCAAATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGGGATGTGAGATCCGTTTTCCTGCAGGAAAATGCTCAAATTTGT  150

seq1  TTTCGGCTGCTCTGAAGAAAAGTGGCTCAGCACAAAATGTGTTTTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGCTGCTCTGAAGAAAAGTGGCTCAGCACAAAATGTGTTTTTTTTC  200

seq1  CAGGTTACAGTGGTGGGGTCATGGGGGACCAGCGGAAGCCCCTTGATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTACAGTGGTGGGGTCATGGGGGACCAGCGGAAGCCCCTTGATATC  250

seq1  CATGGGCTCACACGTTACTTTCAGAGATGCATTCTCAGGACAGCATTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCTCACACGTTACTTTCAGAGATGCATTCTCAGGACAGCATTGTA  300

seq1  AATGCCAGGTTCCCACTCTGGGTGGCTGAGAAGCACAGCCGGTCTAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGGTTCCCACTCTGGGTGGCTGAGAAGCACAGCCGGTCTAAGTG  350

seq1  ACTTTAAACAGGAAAAGTGACTTTAAACTCCAGGGCACCTGGAGTGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAACAGGAAAAGTGACTTTAAACTCCAGGGCACCTGGAGTGAGGC  400

seq1  CATTTTCACCACTCCTGGATTGAATGAAAACTAATTTTGGAATCATAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCACCACTCCTGGATTGAATGAAAACTAATTTTGGAATCATAGTG  450

seq1  TGAAAGAAGGATTAAAATCCACAAGAGAAGGTTTCTTTCTCTTGATGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAGGATTAAAATCCACAAGAGAAGGTTTCTTTCTCTTGATGGTT  500

seq1  GCTATTAAAAAGTGGAAGCGGAACTAGATGCCTATAATCTGAGGACCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAAAAAGTGGAAGCGGAACTAGATGCCTATAATCTGAGGACCAGC  550

seq1  TAGCCTCGCAGGGGTCAGTGGGGACAGTAGCCCACATCCAGATCATATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCGCAGGGGTCAGTGGGGACAGTAGCCCACATCCAGATCATATGG  600

seq1  GAAGTTATACTGTACTCTAGTGTGTGTTCCACAATAGAGTGGAAGGTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTATACTGTACTCTAGTGTGTGTTCCACAATAGAGTGGAAGGTGAC  650

seq1  ACTTGAGTATAGCCAAATCGCTCTTCAGTCCTTTGCACAGATATGTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTATAGCCAAATCGCTCTTCAGTCCTTTGCACAGATATGTAGAA  700

seq1  AACACGTAATCCAGTGTATTCATCTATAGAGGACAGCAGGACCAGGCTAA  750
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AACACGTAATCCAGTGTATTTATCTATAGAGGACAGCAGGACCAGGCTAA  750

seq1  CACTCAGAGCTGTGTAGGGAGCAGAGCTGAGCTAGGGCCTGTGGTCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAGCTGTGTAGGGAGCAGAGCTGAGCTAGGGCCTGTGGTCTGTG  800

seq1  AGTAACATGGTGACAGAACTGCCCGTGTTGTTGACATCTCCCTCTTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACATGGTGACAGAACTGCCCGTGTTGTTGACATCTCCCTCTTCCTT  850

seq1  TGTCTGTCTCTGTCTGTCTGTCTCTGTCTGTCTGTCTGTCTGTCTCTCTC  900
      |||||||||||| ||| |||||||||||| ||||||||||||||||||||
seq2  TGTCTGTCTCTG-CTG-CTGTCTCTGTCTTTCTGTCTGTCTGTCTCTCTC  898

seq1  TCT-GTGTGTGTGTGTGTG-------------TGTGTGT  925
      ||| | |||||||||||||             |||||||
seq2  TCTGGGGTGTGTGTGTGTGGTGGGGGGGTTGTTGTGTGT  937