BAC Information

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BAC

Clone NameB6Ng01-080P24
Chromosome4 (Build37)
Map Location 15,025,654 - 15,223,781
singlet/doubletdoublet
Overlap geneEfcbp1, Tmem64
Upstream geneLOC625831, LOC433687, LOC100040030, LOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551
Downstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080P24.bB6Ng01-080P24.g
ACCDH895977DH895978
length1,1051,088
definitionDH895977|Mus musculus domesticus DNA, BAC clone: B6Ng01-080P24, 5' end.DH895978|Mus musculus domesticus DNA, BAC clone: B6Ng01-080P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,222,766 - 15,223,781)(15,025,654 - 15,026,749)
sequence
gaattcagaacacggagcattgccaaagatcctgagagtatgtcttgctt
cttaaataggggcttggagatatgggtctattgttaaatcacttgatgcc
taaatgaggaccacagtttagatccccagaacccatgtaactaccaggtg
gcaattgtggcttataattccttttggcttaaaacatataacaaaaggct
tataattttaaaaatctatgcaggagtaatcttaatttgctacaatttac
tatatatgtgattcaactcttgctttaagaaaaaaaatagatctaccaaa
ataaataagtctaccaaaaatatacatattttaaacaatagtcacatggc
tggcagccatctctactaaggttaaaggatacacgccacatgacttaacc
cccatcttaacatgactacgtggataaaagaccaaggaagcacctataaa
atttcttcgtcctattgagccctctgtttatcattgtatctaatttcaga
ctaaggaagctatagcaagtttccaaaatatcttggattaggatggattt
gtatatgataaattcctaacgttataaaggtatactcaggttaatagacc
ctaacttaaaaatatatgtacgactacttttatgcctttgctaactctat
tcaacactggggctctaaaaagtttagatagataaaaatagggtttttaa
ataaggtttgataaataaggtttataaatccctaaggtccactcacgttc
acagtaatatctgagttgtctgtctttgctcctttgttaagctggtatta
ggactcccctacaccagctaccaggccttttccctgggtttcagcactag
gtgaatgaatgggaaaagagaagtaaagaaatagaaaagaaggacataac
tgctcttaagtatgatgggggagatatgagggagagcaaggccagaagca
gatacgttatgggaagagtccagaatgaacattaatcctggagctgggca
ctaatgagaaatagggccaggtgaagaaagagagagtaaaggttagacca
aaaggcaggtacaaatgcttggtttaaatagtgaatggcagaccagccct
tgggc
gaattctttgtaagaaagttatacctagtcatgctaaatgatattccata
attaaaattaaacactgtaaaaattatgggttaaagtcatacatgcatgg
agatatcaagaggtgagggtttcttcccatactttgctgtcatggagagc
agaagccaagagctaggatggaacaagagtcagttttgtgaattatatga
aaaaaaatttcccactcttgagtggatatcagcatcctttaaatatggag
aaatgtttattcacttatatataacatggcatgtggtaccttctgcatgt
attgaataactaaacaaataagtagggataaatgattaatttcatggaat
ctgcaaactcaaccagaataattgctatcaaatttgacattctggattgt
cacaataaaaaggaaaaaagtctcagcaaaaaataaaaaataaaaaaata
aattaaaaaaaataaaagaaattcttcattgtggtctcaagtaagtcttt
atgcttttcaaccccatggcaattaggatgagaagatcaagaaaattagg
tgtgcagctcatcaaaccctatggtcccatagaggtagatttctaatcat
gctggattgctttatgcttaaccctaaagttgattaaaaaatagaatccc
tgaaaaatcataaaaatgaaattaaacccttaaagccattagtgaacgag
acaagaacaataatgttcacccgaggctgggtgcccagcttccaacctat
tagatttctgtgaaaagtgctgaaagcttttgttacgtagtctagcgttt
tcctaaccgagacaccttttatgccagatgagagtgcaatattctatgta
gtaagcacttgcttcccaagcaatagaaaactatttttacattataaaat
gaagaaccattaatatttgtgaaaaaataaatattcatttgtacatatct
tgtgtctgttaaatgtacaataggttccacatttatactttaaatatatt
cacaggtttatccataacagggagtatcatttttatagactaacctttga
aggatttaatcagtctgaggcattatcttactgaaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15222766_15223781
seq2: B6Ng01-080P24.b_133_1150 (reverse)

seq1  GCCCAAGGGCTGGGCTGCCCTTCCCTATATAACCCAGCCATTGTTACCTG  50
      ||||||||||||| ||||| ||| |||| ||| |||  ||||  ||||| 
seq2  GCCCAAGGGCTGGTCTGCCATTCACTATTTAAACCAAGCATTTGTACCT-  49

seq1  GCCCTTTTGTCTACCCTTTACTCTCTCTTTTCTTC-CCTGGCCCCTCTTC  99
      ||| ||| ||||| ||||||||||||| ||||||| ||||||||   |||
seq2  GCCTTTTGGTCTAACCTTTACTCTCTC-TTTCTTCACCTGGCCCTATTTC  98

seq1  TCATTAGTGGCCAGCT-CAGGATT-ATGTTCATTCTGGACTCTTCCCAT-  146
      ||||||||| |||||| ||||||| |||||||||||||||||||||||| 
seq2  TCATTAGTGCCCAGCTCCAGGATTAATGTTCATTCTGGACTCTTCCCATA  148

seq1  ACGTCTCTGCTTCTGGCTTTGCTCTCCCTCATATCTCCCCCATCATACTT  196
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACGTATCTGCTTCTGGCCTTGCTCTCCCTCATATCTCCCCCATCATACTT  198

seq1  AAGAGCAGTTATGTCCTTCTTTTCTATTTCTTTACTTCTCTTTTCCCATT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGTTATGTCCTTCTTTTCTATTTCTTTACTTCTCTTTTCCCATT  248

seq1  CATTCACCTAGTGCTGAAACCCAGGGAAAAGGCCTGGTAGCTGGTGTAGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACCTAGTGCTGAAACCCAGGGAAAAGGCCTGGTAGCTGGTGTAGG  298

seq1  GGAGTCCTAATACCAGCTTAACAAAGGAGCAAAGACAGACAACTCAGATA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCTAATACCAGCTTAACAAAGGAGCAAAGACAGACAACTCAGATA  348

seq1  TTACTGTGAACGTGAGTGGACCTTAGGGATTTATAAACCTTATTTATCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTGAACGTGAGTGGACCTTAGGGATTTATAAACCTTATTTATCAA  398

seq1  ACCTTATTTAAAAACCCTATTTTTATCTATCTAAACTTTTTAGAGCCCCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTTAAAAACCCTATTTTTATCTATCTAAACTTTTTAGAGCCCCA  448

seq1  GTGTTGAATAGAGTTAGCAAAGGCATAAAAGTAGTCGTACATATATTTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAATAGAGTTAGCAAAGGCATAAAAGTAGTCGTACATATATTTTT  498

seq1  AAGTTAGGGTCTATTAACCTGAGTATACCTTTATAACGTTAGGAATTTAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGGGTCTATTAACCTGAGTATACCTTTATAACGTTAGGAATTTAT  548

seq1  CATATACAAATCCATCCTAATCCAAGATATTTTGGAAACTTGCTATAGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACAAATCCATCCTAATCCAAGATATTTTGGAAACTTGCTATAGCT  598

seq1  TCCTTAGTCTGAAATTAGATACAATGATAAACAGAGGGCTCAATAGGACG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGTCTGAAATTAGATACAATGATAAACAGAGGGCTCAATAGGACG  648

seq1  AAGAAATTTTATAGGTGCTTCCTTGGTCTTTTATCCACGTAGTCATGTTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTTTATAGGTGCTTCCTTGGTCTTTTATCCACGTAGTCATGTTA  698

seq1  AGATGGGGGTTAAGTCATGTGGCGTGTATCCTTTAACCTTAGTAGAGATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGGGTTAAGTCATGTGGCGTGTATCCTTTAACCTTAGTAGAGATG  748

seq1  GCTGCCAGCCATGTGACTATTGTTTAAAATATGTATATTTTTGGTAGACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAGCCATGTGACTATTGTTTAAAATATGTATATTTTTGGTAGACT  798

seq1  TATTTATTTTGGTAGATCTATTTTTTTTCTTAAAGCAAGAGTTGAATCAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTGGTAGATCTATTTTTTTTCTTAAAGCAAGAGTTGAATCAC  848

seq1  ATATATAGTAAATTGTAGCAAATTAAGATTACTCCTGCATAGATTTTTAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGTAAATTGTAGCAAATTAAGATTACTCCTGCATAGATTTTTAA  898

seq1  AATTATAAGCCTTTTGTTATATGTTTTAAGCCAAAAGGAATTATAAGCCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAGCCTTTTGTTATATGTTTTAAGCCAAAAGGAATTATAAGCCA  948

seq1  CAATTGCCACCTGGTAGTTACATGGGTTCTGGGGATCTAAACTGTGGTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCCACCTGGTAGTTACATGGGTTCTGGGGATCTAAACTGTGGTCC  998

seq1  TCATTTAGGCATCAAGTGAT  1016
      ||||||||||||||||||||
seq2  TCATTTAGGCATCAAGTGAT  1018

seq1: chr4_15025654_15026749
seq2: B6Ng01-080P24.g_72_1159

seq1  GAATTCTTTGTAAGAAAGTTATACCTAGTCATGCTAAATGATATTCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTAAGAAAGTTATACCTAGTCATGCTAAATGATATTCCATA  50

seq1  ATTAAAATTAAACACTGTAAAAATTATGGGTTAAAGTCATACATGCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTAAACACTGTAAAAATTATGGGTTAAAGTCATACATGCATGG  100

seq1  AGATATCAAGAGGTGAGGGTTTCTTCCCATACTTTGCTGTCATGGAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCAAGAGGTGAGGGTTTCTTCCCATACTTTGCTGTCATGGAGAGC  150

seq1  AGAAGCCAAGAGCTAGGATGGAACAAGAGTCAGTTTTGTGAATTATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAAGAGCTAGGATGGAACAAGAGTCAGTTTTGTGAATTATATGA  200

seq1  AAAAAAATTTCCCACTCTTGAGTGGATATCAGCATCCTTTAAATATGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTTCCCACTCTTGAGTGGATATCAGCATCCTTTAAATATGGAG  250

seq1  AAATGTTTATTCACTTATATATAACATGGCATGTGGTACCTTCTGCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTATTCACTTATATATAACATGGCATGTGGTACCTTCTGCATGT  300

seq1  ATTGAATAACTAAACAAATAAGTAGGGATAAATGATTAATTTCATGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATAACTAAACAAATAAGTAGGGATAAATGATTAATTTCATGGAAT  350

seq1  CTGCAAACTCAACCAGAATAATTGCTATCAAATTTGACATTCTGGATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAACTCAACCAGAATAATTGCTATCAAATTTGACATTCTGGATTGT  400

seq1  CACAATAAAAAGGAAAAAAGTCTCAGCAAAAAATAAAAAATAAAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAAAAAGGAAAAAAGTCTCAGCAAAAAATAAAAAATAAAAAAATA  450

seq1  AATTAAAAAAAATAAAAGAAATTCTTCATTGTGGTCTCAAGTAAGTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAAAATAAAAGAAATTCTTCATTGTGGTCTCAAGTAAGTCTTT  500

seq1  ATGCTTTTCAACCCCATGGCAATTAGGATGAGAAGATCAAGAAAATTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTCAACCCCATGGCAATTAGGATGAGAAGATCAAGAAAATTAGG  550

seq1  TGTGCAGCTCATCAAACCCTATGGTCCCATAGAGGTAGATTTCTAATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGCTCATCAAACCCTATGGTCCCATAGAGGTAGATTTCTAATCAT  600

seq1  GCTGGATTGCTTTATGCTTAA-CCTAAAGTTGATT-AAAAATAGAATCCC  648
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  GCTGGATTGCTTTATGCTTAACCCTAAAGTTGATTAAAAAATAGAATCCC  650

seq1  TGAAAAATCATAAAAATGAAATTAAACCCTTAAAGCCATTAGTGAACGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATCATAAAAATGAAATTAAACCCTTAAAGCCATTAGTGAACGAG  700

seq1  ACAAGAACAATAATGTTCACCCGAGGCT-GGTGCCCAGCTTCCAACCTAT  747
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACAAGAACAATAATGTTCACCCGAGGCTGGGTGCCCAGCTTCCAACCTAT  750

seq1  TAGA-TTCTGTGATAAGTGCTGAAAGCTTTTGTTACGTAGTCTAGCGTTT  796
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCTGTGAAAAGTGCTGAAAGCTTTTGTTACGTAGTCTAGCGTTT  800

seq1  T-CTTACCGAGACACCTTTTAAGGCCAGATGAGAGTGCAATATTCTATGT  845
      | || ||||||||||||||| | |||||||||||||||||||||||||||
seq2  TCCTAACCGAGACACCTTTT-ATGCCAGATGAGAGTGCAATATTCTATGT  849

seq1  AGTAAGCAC-TGCTTCCCAAGCAATAG-AAACTATTTTTACA-TAT-AAA  891
      ||||||||| ||||||||||||||||| |||||||||||||| ||| |||
seq2  AGTAAGCACTTGCTTCCCAAGCAATAGAAAACTATTTTTACATTATAAAA  899

seq1  TGAAGAACCATTAATA-TTGTGAAAAAATAAATTATTCATTTGTACATAT  940
      |||||||||||||||| ||||||||||||||| |||||||||||||||||
seq2  TGAAGAACCATTAATATTTGTGAAAAAATAAA-TATTCATTTGTACATAT  948

seq1  C-TGTGTCTGTTAAAATGTACAATTAGTT-CACATTTATACTTTAAATTA  988
      | |||||||||| |||||||||||  ||| ||||||||||||||||| ||
seq2  CTTGTGTCTGTT-AAATGTACAATAGGTTCCACATTTATACTTTAAA-TA  996

seq1  TATTTCACAGGTTTTAATCCATAACAATGGAGTATTATTTTTATTAGAAC  1038
      || |||||||||||  ||||||||| | ||||||| ||||||| ||| ||
seq2  TA-TTCACAGGTTT--ATCCATAAC-AGGGAGTATCATTTTTA-TAG-AC  1040

seq1  TAACCTTTGAAAGGAATTTTAATTCAGTCTGAAGCCAAATTAATCATTTA  1088
      ||||||||| |||||  ||||| ||||||||| ||   ||| |||  |||
seq2  TAACCTTTG-AAGGA--TTTAA-TCAGTCTGAGGC---ATT-ATC--TTA  1080

seq1  CTGAACCC  1096
      ||||||||
seq2  CTGAACCC  1088