BAC Information

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BAC

Clone NameB6Ng01-082O04
Chromosome4 (Build37)
Map Location 150,598,717 - 150,698,930
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneLOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082O04.bB6Ng01-082O04.g
ACCDH897307DH897308
length2641,154
definitionDH897307|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O04, 5' end.DH897308|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,698,667 - 150,698,930)(150,598,717 - 150,600,126)
sequence
ctcacggtctgcaatcagtgacaacatatggcatgtaacgcacataacgc
tgtctaaggagaaagctcgtcaccgttctgagacttaacaggtgctttca
agttgtgtctcggcctctgagctgacagagtaatctggcatcccagacga
ggtccatccctcagacacgtgtgtgcttgtgtaagctgtctggttaccat
actggatacacaggagagtagtcacagggtcatggtggtggtgttgggat
gttgatgttgggga
gaattctcaggactctctctggaggcttagcagtatttctgtgaactagg
gcatgagatgggggcaagctggctgtagtgcagctaggaaagcagccatc
accttacaggcagggggtagtgaatttctctccgtgtatgagccattccg
gcctctgggaagtagggtgaggagccatcccatcactgtcttggctcagg
aagagggaatccctgataggaactagtcccttgggacccttcttgcctag
gtcaccccataaggaccatacgctggctgtgactgagttggcctggtgcc
cgcgtcccttctgggggatctagctgattgtttactgggccaaagtacag
tcaggccagggactcactgtctctgtttgagattatttcagaaggtttgg
tggtgccccactcagcaggagctgggagccctgtctcctacaggaaggta
tctgaatgcctcatcttgcctgctgctggtctgctcatgaagaaaaggtt
tctgcaacaagggaggagccatgtccagagtcacaccaggagtgaggagg
gcctgtttccagtgcctgcagccgctcttaaagtctgaaccacgtgtcac
ggagtctccagttctcttgggtgatggtcttagaaggcttgggctacagt
aaggatgctatccatctccctctggtggccagcctttctctcagcctttt
tccatcctctgcctcattgagctgcccaccccaggtaccacttgctatgg
ctttattcactcataggaatgcccttaggtcattttcttatcgggcagat
ggggtcccaagctttgctgacaatgcattcttcaagtagatgatgtactt
caccccagagatcttcgaagcacaaccctcacaactcaccctctgatgac
cttgtgtccggtccagcggacttcatgtcatagcttggtttgggggcgtg
ggtcataatccgtgggcccagttgcttgtgcatcgtgtggctaaaaggag
cacagatggtcttcttcctcacctagaggggacaggacttcttttccatg
tcacttcaagttcgctggaggttattcttatatcagctcagttctccagc
ctggagctcatcgggtgggaccattgaccattgtcttaggggaatctcaa
gaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150698667_150698930
seq2: B6Ng01-082O04.b_56_319 (reverse)

seq1  TCCCCAACATCAACATCCCAACACCACCACCATGACCCTGTGACTACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAACATCAACATCCCAACACCACCACCATGACCCTGTGACTACTCT  50

seq1  CCTGTGTATCCAGTATGGTAACCAGACAGCTTACACAAGCACACACGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATCCAGTATGGTAACCAGACAGCTTACACAAGCACACACGTGT  100

seq1  CTGAGGGATGGACCTCGTCTGGGATGCCAGATTACTCTGTCAGCTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGATGGACCTCGTCTGGGATGCCAGATTACTCTGTCAGCTCAGAG  150

seq1  GCCGAGACACAACTTGAAAGCACCTGTTAAGTCTCAGAACGGTGACGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGACACAACTTGAAAGCACCTGTTAAGTCTCAGAACGGTGACGAGC  200

seq1  TTTCTCCTTAGACAGCGTTATGTGCGTTACATGCCATATGTTGTCACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTAGACAGCGTTATGTGCGTTACATGCCATATGTTGTCACTGA  250

seq1  TTGCAGACCGTGAG  264
      ||||||||||||||
seq2  TTGCAGACCGTGAG  264

seq1: chr4_150598717_150600126
seq2: B6Ng01-082O04.g_71_1224

seq1  GAATTCTCAGGACTCTCTCTGGAGGCTTAGCAGTATTTCTGTGAACTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGACTCTCTCTGGAGGCTTAGCAGTATTTCTGTGAACTAGG  50

seq1  GCATGAGATGGGGGCAAGCTGGCTGTAGTGCAGCTAGGAAAGCAGCCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGATGGGGGCAAGCTGGCTGTAGTGCAGCTAGGAAAGCAGCCATC  100

seq1  ACCTTACAGGCAGGGGGTAGTGAATTTCTCTCCGTGTATGAGCCATTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACAGGCAGGGGGTAGTGAATTTCTCTCCGTGTATGAGCCATTCCG  150

seq1  GCCTCTGGGAAGTAGGGTGAGGAGCCATCCCATCACTGTCTTGGCTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGGGAAGTAGGGTGAGGAGCCATCCCATCACTGTCTTGGCTCAGG  200

seq1  AAGAGGGAATCCCTGATAGGAACTAGTCCCTTGGGACCCTTCTTGCCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAATCCCTGATAGGAACTAGTCCCTTGGGACCCTTCTTGCCTAG  250

seq1  GTCACCCCATAAGGACCATACGCTGGCTGTGACTGAGTTGGCCTGGTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCCATAAGGACCATACGCTGGCTGTGACTGAGTTGGCCTGGTGCC  300

seq1  CGCGTCCCTTCTGGGGGATCTAGCTGATTGTTTACTGGGCCAAAGTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTCCCTTCTGGGGGATCTAGCTGATTGTTTACTGGGCCAAAGTACAG  350

seq1  TCAGGCCAGGGACTCACTGTCTCTGTTTGAGATTATTTCAGAAGGTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCAGGGACTCACTGTCTCTGTTTGAGATTATTTCAGAAGGTTTGG  400

seq1  TGGTGCCCCACTCAGCAGGAGCTGGGAGCCCTGTCTCCTACAGGAAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCCCACTCAGCAGGAGCTGGGAGCCCTGTCTCCTACAGGAAGGTA  450

seq1  TCTGAATGCCTCATCTTGCCTGCTGCTGGTCTGCTCATGAAGAAAAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGCCTCATCTTGCCTGCTGCTGGTCTGCTCATGAAGAAAAGGTT  500

seq1  TCTGCAACAAGGGAGGAGCCATGTCCAGAGTCACACCAGGAGTGAGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAACAAGGGAGGAGCCATGTCCAGAGTCACACCAGGAGTGAGGAGG  550

seq1  GCCTGTTTCCAGTGCCTGCAGCCGCTCTTAAAGTCTGAACCACGTGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTCCAGTGCCTGCAGCCGCTCTTAAAGTCTGAACCACGTGTCAC  600

seq1  GGAGTCTCCAGTTCTCTTGGGTGATGGTCTTAGAAGGCTTGGGCTACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTCCAGTTCTCTTGGGTGATGGTCTTAGAAGGCTTGGGCTACAGT  650

seq1  AAGGATGCTATCCATCTCCCTCTGGTGGCCAGCC-TTCTCTCAGCCTTTT  699
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGGATGCTATCCATCTCCCTCTGGTGGCCAGCCTTTCTCTCAGCCTTTT  700

seq1  TCCATCCTCTGCCTCATTGAGCTGCCCACCCCAGGTACCACTTGCTATGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTCTGCCTCATTGAGCTGCCCACCCCAGGTACCACTTGCTATGG  750

seq1  CTTTATTCACTCATAGGAATGCCCTTAGGTCATTTTCTTATCGGGCAGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCACTCATAGGAATGCCCTTAGGTCATTTTCTTATCGGGCAGAT  800

seq1  GGGGTCCCAAGC-TTGCTGACAATGCA-TCTTCAAGTAGATGATGTACTT  847
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  GGGGTCCCAAGCTTTGCTGACAATGCATTCTTCAAGTAGATGATGTACTT  850

seq1  CAACCCAGAGATC-TCGAAGCACAAACCCTCACAACTCACCC-CTGATGA  895
      || |||||||||| ||||||||| |||||||||||||||||| |||||||
seq2  CACCCCAGAGATCTTCGAAGCAC-AACCCTCACAACTCACCCTCTGATGA  899

seq1  CC-TGTGTCCGGTCCAGCGGACTTCATGTCATAGC-TGGTTTGGGGGCGT  943
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTTGTGTCCGGTCCAGCGGACTTCATGTCATAGCTTGGTTTGGGGGCGT  949

seq1  GGGTCAT-ATCCGT-GGCCCAGTTGCCTGTGCATCGTGTGGCCTAAAAGG  991
      ||||||| |||||| ||||||||||| |||||||||||||| ||||||||
seq2  GGGTCATAATCCGTGGGCCCAGTTGCTTGTGCATCGTGTGG-CTAAAAGG  998

seq1  AGCACAGATGGTC-TCTT-CTCACCTAGAGGGGACAAGGACATCTTGCCC  1039
      ||||||||||||| |||| |||||||||||||||| ||||| ||||  ||
seq2  AGCACAGATGGTCTTCTTCCTCACCTAGAGGGGAC-AGGACTTCTTTTCC  1047

seq1  ATGTCACTTCAGGTCCGCTGCAGGCCATTCTTATATTCAGCTCAG-TCCC  1088
      ||||||||||| || ||||| |||  ||||||||| ||||||||| || |
seq2  ATGTCACTTCAAGTTCGCTGGAGGTTATTCTTATA-TCAGCTCAGTTCTC  1096

seq1  CAGCCCTGAGCTCAGCGGGT--GAGCATGGACCAATGTCTTAGGGGACT-  1135
      |||||  ||||||| |||||  || ||| ||||| |||||||||||| | 
seq2  CAGCCTGGAGCTCATCGGGTGGGACCATTGACCATTGTCTTAGGGGAATC  1146

seq1  TCAGAGAACCAGGGACAGTGGGGCCTGCAGAAAATAGGCAGAGCCACCTC  1185
      ||| |||||                                         
seq2  TCA-AGAAC-----------------------------------------  1154

seq1  AGGGCCTCTAAGAAGTTGGGTGGGACTAGGGCCTTCTGTTTCACTTGTCC  1235
                                                        
seq2  --------------------------------------------------  1154

seq1  TTAGAGACACAGCCAGAATCCCTTTAACCCGCAGTAGGGATGACCAGGAG  1285
                                                        
seq2  --------------------------------------------------  1154

seq1  AGAGGAGTCGCCATATTGAAGGTGGATATCCATCCCATTTAGGTCAGCCT  1335
                                                        
seq2  --------------------------------------------------  1154

seq1  CCTGCCTCAGGCTCCCTGAGGCACACATGTTTCTGAAGGAAGTAAACATT  1385
                                                        
seq2  --------------------------------------------------  1154

seq1  TCCTTGGCAAAGAATTCTCAAGAAC  1410
                               
seq2  -------------------------  1154