MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-085E06
Chromosome	4 (Build37)
Map Location	67,129,671 - 67,130,850
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC667499, Tlr4, LOC100039379
Downstream gene	Hmgb1-rs18, LOC433715, Tcp1-ps1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667499 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Tlr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21898 MGI:96824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039379 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039379
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Hmgb1-rs18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15298 MGI:104763
definition	gene_synonym : Hmg1-rs18 note : high mobility group box 1, related sequence 18 pseudo : _no_value

name	LOC433715 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 mRNAs, 910 ESTs, 7 Proteins pseudo : _no_value

name	Tcp1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21455 MGI:98536
definition	note : t-complex protein 1, pseudogene 1 pseudo : _no_value

name	Tlr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130391 GeneID:21898 MGI:96824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : toll-like receptor 4 transcript_id : NM_021297.2

name	Tlr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946594 CCDS:CCDS18271.1 GeneID:21898 MGI:96824
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0046696 - lipopolysaccharide receptor complex [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001530 - lipopolysaccharide binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0007250 - activation of NF-kappaB-inducing kinase [Evidence NAS]; GO:0016046 - detection of fungus [Evidence ISS]; GO:0007249 - I-kappaB kinase/NF-kappaB cascade [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0042116 - macrophage activation [Evidence ISS]; GO:0045576 - mast cell activation [Evidence NAS]; GO:0045671 - negative regulation of osteoclast differentiation [Evidence ISS]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence IDA]; GO:0045362 - positive regulation of interleukin-1 biosynthesis [Evidence NAS]; GO:0045084 - positive regulation of interleukin-12 biosynthesis [Evidence ISS]; GO:0045368 - positive regulation of interleukin-13 biosynthesis [Evidence NAS]; GO:0045410 - positive regulation of interleukin-6 biosynthesis [Evidence NAS]; GO:0046330 - positive regulation of JNK cascade [Evidence IGI] [Evidence IDA]; GO:0009617 - response to bacterium [Evidence IMP]; GO:0042088 - T-helper 1 type immune response [Evidence ISS] codon_start : 1 note : lipopolysaccharide response product : toll-like receptor 4 protein_id : NP_067272.1

name	LOC667499 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667499
definition	number : 1 pseudo : _no_value

name	LOC100039379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039379
definition	number : 5 pseudo : _no_value

name	LOC100039379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039379
definition	number : 4 pseudo : _no_value

name	LOC100039379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039379
definition	number : 3 pseudo : _no_value

name	LOC100039379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039379
definition	number : 2 pseudo : _no_value

name	LOC100039379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039379
definition	number : 1 pseudo : _no_value

name	LOC433715 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252576 GeneID:433715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 mRNAs, 910 ESTs, 7 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_031517.1

clone name	MSMg01-366K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-402P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-085E06.b	B6Ng01-085E06.g
ACC	DH898988	DH898989
length	1,255	1,153
definition	DH898988\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E06, 5' end.	DH898989\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E06, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca gtagccaacatcaaagtaaatggtgagaagcttgaagcaatcccattaaa atcagggactagacaaggctacccattttctccctacctattcaacattg tacttgaagtcctagccagagcaattcaaaaacaaaaggagatcagggga tagaaattggaaaagaagtcaaaatatcactttttgcagatgatatgata gtatatataaggaccctaaaaattccaccagagaactcctaaacctgata aacagctttggtgaagtagctggatatagaattaactcaaacaaatcaat ggcctttctctacacaaagaataaacaggctgagaaagaaattagggaaa caacacccttcacaatcgtcacaaataatataaaataccttgaccttggc gtgactctaactaaggtagtgaacgatctgtatgataaaaacttcaaggc tctgaagaaagaaattaaagaggatctcaaaagatagaaagatctcacat gctcatggattggcaggatcaacaatgtaaaaatggctatcttgccaaaa gcaatctatagattcagtccaatcctcatcaaaattccaactcaattctt caatgaattagaaagagcaatctgcaaactcatctggaataacaaaaaac ctaggatagcaaaaactcttctcaaggataaaagtacctctggtggaatc accatgcttgccttaaagctgtactacagagcaactgtgattaaaaactg catgatgctggtatagtgacagacaagtagaccaatggaatagaattgaa gacccagaaatgaagccacacacctatggtcacttgatctttgacaaggg agctaaaacatccagtggtaaatggacagtattttcaacaaaagtgctgg cacaactggtggttatcatgtagaaaatgcaaatgatccattcctatctc cttgtactaaagtgaaatttagtatatcagagctgcacataaagcagaga aactgaactataagtgtagaaaggtggggaaaggctcgagattgggttac aggggaaacattcttgaatagaacgcatgcttgtgctgtatattgagatg acaatgaacctcatggaactgcaagcctttctgtagcatagacctcataa gataacgggaccccacgattgagaccttaccatccttaaccgagataggg gacta	gaattctctggagagtaatatacaatggatatttcctctataatcttaag tacttaccacctatgacataatgagcacataactcaataaatggatggat caataaacctgcttggattaaaattggaggggctttgtcttaatgaagta aaaaaaaaaaaaaaagctacttaatttttctaggattccttcaattcctt ttttatgcatctgtacccaaccccaaaatttattatcttcaaccatcctt cctccttctctcgatgtgacccttgatatttaaataacctaatctacttt attaatttacgtatcctttaataatgatttggcacaaaacaatgttttgc ttccctaatgttagcactcatcacaatgtagatatattgagtaaactaac tgctatttgttttaaagttatacagattttgaatcaatcacgaatatatg cagagcattacattgggtgacatgtagagaggatgaaggtaggaattttg cttatacttagagctatgacaacactgagtttggaacagatacaaaacag ttactcatcaaacagagtacaagtagactttggaaaatatctactgcatt aaacttccacagcatccatctgagttcaaattctactttgatttacagaa tgtacaatactatgcacatcagttaactattgaacccttatctcattagc tgtaatatgggaaccaatttcaatacctcttaaagatttttaggtacttc aattatatttcccttatcaagtgattagtccagtgtctggcatacagttt gttttcaaaaagccctaaaatttattattgtcattagtataaataagaca ccattagatgataaatatgaagtaattgactgtgcaaatcatgtgttaat gtaattatggtaaattaaattaatatctgcttctgtactagttaggaaca atgtgcttgtgtttctctactttagacccagctttcaaaaaagatgtttc actgtagcaggaaatcaataaatgtgtcaagatctactattttcgatctc tgatgtattaacttgtcctatattcctgcatttattcagatattttccta gtaatgaaagagatttgattaggagatatttttgttgagacatctcaact aac
quality values	Open. Hide. 61 47 41 36 61 35 26 49 55 61 55 61 55 36 61 61 61 61 61 61 61 61 59 52 59 36 24 18 13 13 23 18 16 23 22 36 55 59 59 59 61 59 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 59 61 61 55 35 35 55 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 59 61 61 61 59 61 61 59 59 59 61 59 61 59 59 59 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 61 61 59 59 59 59 59 61 61 61 61 61 61 59 52 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 45 61 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 55 61 61 61 61 55 43 55 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 61 61 52 61 61 53 61 61 61 61 61 61 52 61 61 61 61 61 61 61 41 61 61 61 53 61 61 61 61 61 61 61 53 61 61 61 61 47 57 57 46 53 53 53 57 51 47 47 39 53 53 52 53 53 57 53 53 57 57 57 57 53 57 57 53 57 53 53 53 53 53 53 39 34 20 50 57 57 53 53 53 57 53 53 53 53 53 57 53 47 39 57 47 38 47 53 53 37 31 41 57 53 57 57 53 52 53 53 47 41 57 38 52 47 47 41 37 52 57 57 53 45 41 38 57 50 38 52 50 34 53 53 53 53 52 30 40 42 40 53 57 53 45 57 37 47 42 53 53 53 53 53 47 34 46 46 53 57 45 40 53 52 53 47 57 30 36 42 42 34 53 28 53 57 57 52 52 50 52 50 50 36 57 31 23 44 33 50 30 57 57 53 50 37 42 42 37 40 37 37 40 35 52 39 51 32 25 38 57 57 52 32 40 29 37 39 39 52 37 46 46 29 57 34 47 45 36 37 35 44 37 30 38 53 37 30 39 36 20 31 28 48 37 57 53 29 35 44 47 33 22 37 40 37 40 35 37 53 13 37 29 31 31 31 44 30 40 33 22 48 31 46 46 46 32 30 30 47 29 20 38 38 39 25 32 35 38 34 48 28 35 34 30 27 29 48 29 32 26 35 29 18 29 48 25 29 29 31 37 17 45 22 30 28 25 36 34 35 35 35 16 47 33 24 33 29 24 31 31 34 11 39 31 23 20 43 51 25 26 29 33 30 19 43 30 16 29 16 30 18 29 24 28 26 28 29 36 24 36 15 27 21 23 28 21 28 22 28 46 29 28 29 20 6 19 19 51 23 33 17 27 28 43 43 43 39 22 14 35 22 33 24 25 29 26 33 25 28 51 29 23 24 31 21 28 23 27 20 28 27 51 51 26 34 19 23 21 15 18 51 7 8 7 17 29 33 29 23 14 15 34 22 15 24 28 29 51 14 12 24 5 8 14 12 17 8 7 21 14 25 14 38 51 51 32 19 28 20 12 51 12 32 15 12 20 19 29 14 28 27 27 27 31 20 15 13 12 9 21 14 5 13 15 15 22 27 15 39 26 27 22 32 14 44 12 25 35 10 31 15 26 19 16 8 12 9 6 5 4 11 22 25 25 23 6 8 5 7 19 30 23 8 16 9 10 21 10 9 5 5 12 22 10 21 11 13 27 9 7 4 10 5 4 7 8 31 7 12 30 27 9 7 10 6 31 37 25 14 37 29 7 8 20 6 11 5 21 5 9 5 10 17 24 22 8 9 7 6 6 20 31 30 13 13 25 20 15 5 13 7 23 5 6 7 19 5 9 4 5 25 6 4 5 9 18 5 8 3 5 6 9 6 7 11 5 7 6 10 3 4 4 13 6 9 4 11 3 4 4 4 17 17 4 18 3 8 18 10 5 22 5 18 7 6 14 14 5 9 7 14 7 14 4 8 6 7 5 3 4 3 8 3 3 6 5 9 4 2 3 9 3 1 3 3 1 1 3 3 4 18 7 10 17 7 4 1 13 16 10 20 16 5 5 10 10 17 4 7 4 4 2 1 3 4 12 18 3 7 3 3 18 5 17 8 7 18 3 3 3 4 8 4 20 3 2 15 13 25 14 7 4 3 9	Open. Hide. 61 61 59 59 61 24 26 43 20 24 19 23 12 26 43 49 59 59 59 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 45 36 43 28 35 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 59 59 59 55 59 59 59 61 61 61 61 59 59 59 61 61 61 61 61 59 59 55 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 52 52 55 41 41 44 59 59 43 59 61 61 59 59 50 52 41 44 59 59 61 59 59 59 59 59 59 59 36 52 59 35 44 52 59 59 59 59 55 55 61 61 61 59 61 59 61 59 59 59 61 59 59 44 49 59 55 59 59 52 59 59 59 59 59 52 36 59 59 52 59 43 52 59 59 59 61 61 59 49 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 61 61 61 61 61 59 59 61 59 59 59 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 59 44 59 59 59 59 59 61 59 59 59 59 59 59 61 61 61 61 61 59 59 59 59 59 59 59 61 61 59 59 59 59 59 55 61 61 61 61 59 55 55 59 61 61 61 59 61 61 61 59 36 45 59 43 52 61 61 59 59 61 59 61 61 61 61 61 59 59 61 59 59 59 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 49 61 49 45 52 43 52 52 59 43 41 45 59 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 61 52 61 61 61 61 61 61 61 61 61 55 55 61 61 61 55 61 61 55 61 52 61 61 61 61 61 55 61 61 61 55 61 61 55 55 50 61 55 61 61 55 55 41 50 55 50 61 55 50 55 55 55 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 55 61 55 61 61 61 61 50 61 53 61 53 61 61 61 52 61 61 61 61 53 61 61 61 61 61 61 61 61 61 50 61 52 47 53 45 50 50 61 53 53 53 39 39 42 26 50 45 32 61 53 50 61 61 61 47 50 61 50 53 53 53 53 53 61 61 42 42 61 47 46 52 61 53 47 61 61 61 61 24 21 22 19 16 20 47 43 53 52 31 61 50 43 39 47 47 47 47 39 39 45 50 47 43 53 36 45 50 47 27 53 47 46 53 53 37 57 53 53 42 53 53 40 47 50 40 40 47 47 50 47 47 52 42 48 57 28 53 47 53 53 42 45 57 38 42 53 45 53 53 50 53 53 52 53 53 52 24 50 31 53 53 52 52 52 32 40 37 38 32 33 41 50 53 45 29 33 47 47 47 50 40 45 34 50 45 24 43 53 50 34 34 27 18 5 10 22 29 36 32 53 53 30 50 33 28 45 27 50 37 57 33 21 14 35 32 23 38 38 42 38 38 38 38 57 52 32 32 24 33 33 57 42 39 22 31 17 24 38 42 40 40 22 34 34 50 32 38 37 42 53 21 21 57 43 33 37 32 36 31 33 35 37 24 37 28 22 23 31 27 35 40 29 32 42 30 53 31 36 31 31 34 24 35 37 23 31 20 37 31 37 23 24 14 53 53 21 23 24 53 53 53 43 26 29 57 16 15 25 53 48 40 25 53 35 28 33 31 27 29 32 38 21 27 23 21 16 14 5 7 14 29 39 46 25 29 32 29 19 31 13 16 18 47 14 30 30 30 19 31 22 30 26 13 48 48 48 25 21 28 28 27 38 22 25 38 13 15 29 28 25 28 31 39 20 28 26 51 46 24 26 28 22 25 38 14 33 18 39 30 29 19 34 14 38 36 27 35 29 26 29 23 8 33 46 20 14 26 26 46 29 21 14 28 23 21 16 6 7 12 35 27 34 23 34 17 30 30 10 29 28 29 18 13 26 29 21 23 34 26 23 8 28 15 29 19 33 31 25 21 32 12 27 12 46 20 27 11 24 14 27 20 21 51 13 29 10 35 18 24 32 23 13 12 9 14 8 6 13 38 51 38 51 14 13 28 12 13 15 38 28 22 15 21 10 33 11 36 9 25 16 27 18 14 51 20 28 17 24 12 10 33 35 29 5 16 10 24 15 10 5 7 6 22 12 29 13 14 7 6 9 19 44 44 19 34 8 35 8 23 9 17 25 33 33 9 15 9 29 9 5 18 14 15 16 5 10 8 12 9 10 29 16 5 5 17 8 15 20 21 14 20 29 42 21 5 6 30 14 27 10 13 3 4 5 34 37 22 8 23 9 6 4 5 13 5 3 3 4 20 16 5 15 11 26 7 13 19 13 10 4 5 9 9 9 5 5 5 6 11 9 23 32 23 6 8 11 24 14 15 20 6 11 11 10 7 5 4 6 8 12 8 9 5 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_67129671_67130850
seq2: B6Ng01-085E06.g_72_1224

seq1  GAATTCTCTGGAGAGTAATATACAATGGATATTTCCTCTATAATCTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGAGAGTAATATACAATGGATATTTCCTCTATAATCTTAAG  50

seq1  TACTTACCACCTATGACATAATGAGCACATAACTCAATAAATGGATGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCACCTATGACATAATGAGCACATAACTCAATAAATGGATGGAT  100

seq1  CAATAAACCTGCTTGGATTAAAATTGGAGGGGCTTTGTCTTAATGAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAACCTGCTTGGATTAAAATTGGAGGGGCTTTGTCTTAATGAAGTA  150

seq1  AAAAAAAAAAAAAAAGCTACTTAATTTTTCTAGGATTCCTTCAATTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGCTACTTAATTTTTCTAGGATTCCTTCAATTCCTT  200

seq1  TTTTATGCATCTGTACCCAACCCCAAAATTTATTATCTTCAACCATCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGCATCTGTACCCAACCCCAAAATTTATTATCTTCAACCATCCTT  250

seq1  CCTCCTTCTCTCGATGTGACCCTTGATATTTAAATAACCTAATCTACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCTCTCGATGTGACCCTTGATATTTAAATAACCTAATCTACTTT  300

seq1  ATTAATTTACGTATCCTTTAATAATGATTTGGCACAAAACAATGTTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTACGTATCCTTTAATAATGATTTGGCACAAAACAATGTTTTGC  350

seq1  TTCCCTAATGTTAGCACTCATCACAATGTAGATATATTGAGTAAACTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAATGTTAGCACTCATCACAATGTAGATATATTGAGTAAACTAAC  400

seq1  TGCTATTTGTTTTAAAGTTATACAGATTTTGAATCAATCACGAATATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTGTTTTAAAGTTATACAGATTTTGAATCAATCACGAATATATG  450

seq1  CAGAGCATTACATTGGGTGACATGTAGAGAGGATGAAGGTAGGAATTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATTACATTGGGTGACATGTAGAGAGGATGAAGGTAGGAATTTTG  500

seq1  CTTATACTTAGAGCTATGACAACACTGAGTTTGGAACAGATACAAAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACTTAGAGCTATGACAACACTGAGTTTGGAACAGATACAAAACAG  550

seq1  TTACTCATCAAACAGAGTACAAGTAGACTTTGGAAAATATCTACTGCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCATCAAACAGAGTACAAGTAGACTTTGGAAAATATCTACTGCATT  600

seq1  AAACTTCCACAGCATCCATCTGAGTTCAAATTCTACTTTGATTTACAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCACAGCATCCATCTGAGTTCAAATTCTACTTTGATTTACAGAA  650

seq1  TGTACAATACTATGCACATCAGTTAACTATTGAACCCTTATCTCATTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAATACTATGCACATCAGTTAACTATTGAACCCTTATCTCATTAGC  700

seq1  TGTAATATGGGAACCAATTTCAATACCTCTTAAAGATTTTTAGGTACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATGGGAACCAATTTCAATACCTCTTAAAGATTTTTAGGTACTTC  750

seq1  AATTATATTTCCCTTATCAAGTGATTAGTCCAGTGTCTGGCATACAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATTTCCCTTATCAAGTGATTAGTCCAGTGTCTGGCATACAGTTT  800

seq1  GTTTTCAAAAAGCCCTAAAATTTATTATTGTCATTAGTATAAATAAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAAAAAGCCCTAAAATTTATTATTGTCATTAGTATAAATAAGACA  850

seq1  CCATTAGATGATAAAATATGAAGTAATTGACTGTGCAAAATCATGTGTTA  900
      |||||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  CCATTAGATGAT-AAATATGAAGTAATTGACTGTGC-AAATCATGTGTTA  898

seq1  ATGTAATTATGGTAAATTAAATTAATATCTGCTTCTGTTACTAGTTAGGA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGTAATTATGGTAAATTAAATTAATATCTGCTTCTG-TACTAGTTAGGA  947

seq1  ACAATGTGCTTGTGTTTCTCCTACTTTAAGACCCAGCTATCAAAAAAGAT  1000
      ||||||||||||||||||| ||||||| |||||||||| |||||||||||
seq2  ACAATGTGCTTGTGTTTCT-CTACTTT-AGACCCAGCTTTCAAAAAAGAT  995

seq1  GTTTCACTGTAAGCAGGGAAATCAATAAAATGTGTCATAGATCCTACATA  1050
      |||||||||| |||| |||||||||| |||||||||| |||| |||| ||
seq2  GTTTCACTGT-AGCA-GGAAATCAAT-AAATGTGTCA-AGAT-CTAC-TA  1039

seq1  TTTTCGAATCTCTGATGTAATTAAACTTGTCTTAATTATTCCTTGCATTT  1100
      |||||| ||||||||||||  | |||||||| ||  |||||| |||| ||
seq2  TTTTCG-ATCTCTGATGTA--TTAACTTGTCCTA--TATTCC-TGCA-TT  1082

seq1  TATTTCAAGATATTTTTCCTAGTAACTGGAAAAGAGATTTGAATTTAGGA  1150
      ||||   ||||| |||||||||||| ||  ||||||||||||  ||||||
seq2  TATT--CAGATA-TTTTCCTAGTAA-TG--AAAGAGATTTGA--TTAGGA  1124

seq1  GATATTTTGTTTGAGGACTACTCAACTAAC  1180
      ||||||||  |||| |||  ||||||||||
seq2  GATATTTTTGTTGA-GACATCTCAACTAAC  1153

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information