BAC Information

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BAC

Clone NameB6Ng01-085O08
Chromosome4 (Build37)
Map Location 146,873,976 - 146,977,252
singlet/doubletdoublet
Overlap geneOTTMUSG00000010671, LOC545718, OTTMUSG00000010673
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701
Downstream gene2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085O08.bB6Ng01-085O08.g
ACCDH899442DH899443
length1,0041,115
definitionDH899442|Mus musculus domesticus DNA, BAC clone: B6Ng01-085O08, 5' end.DH899443|Mus musculus domesticus DNA, BAC clone: B6Ng01-085O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,873,976 - 146,874,706)(146,976,123 - 146,977,252)
sequence
gaattcctgtgctttgttccctcttcatgtcatttgtccacattgaatgg
tgttcagattatattttgacttttgcctcttgagtttgtttcataattca
ttttgtcatgagaattggtattccattagtgatttgggctaggggaattt
tattttatttatttatttatttatttatttatttatttatttatttattt
atttattttttaataggttttttggcttatatttgtttatttatgttaat
ttttttattaggtattttcctcgtttacattttcaatgctatcccaaagg
tcccccatatccaccccccccaatcccctacccacccactcccccttttt
ggccctggtgttcccctgtactggggcatataaagttggcaagtccaatg
ggcctctctttgcagtgctggccgactaggccatcttttgatgcatatgc
agctagagacaagagctctggggtactggttagttcatattgttgttcca
cctatagggttgcagttccctttagctctttgggtagtatctctagctcc
tgcattgggggccgtgtgatccatcccatagctgactgtgatcatccatt
tctgtatttgctaggcgctggcatagtctcacaagagagagctatatctg
ggtcctttcagcaaaattttgctagtgtgtgcaatggtgtcagcgtttgg
aagctgattatgggatggatccctgcatagggcaatcactagatggtcca
tctttttgtcatagctccaaattttgtttctgtaactccttccatgggta
gtttgttcccatttttaggaagaggtaaagtgtccacactttggtctttc
tttcttcttgaatttcatgtgtttagcaagttgtatcttatatctttggg
tatcctaagtttctgggctaatatccacttatcaatgagtacatattgag
tgagttcctttgtgattggtttacctcactcagatgatgccctccaggtc
atca
gaattcttctgttcaattaaacatcttttacttcacttatggtcaaattt
cagaagttcagaaatcatgactggtgaggcctaacagatccaggtgctgg
tgaatgagcacagccaggaaggcactgcacgggtgcagcacacatgggca
aggggcagcacaggtccccataggtcactgtcagcttccaaagatatccg
ttgagatgtctgtagagaaaccctgttaatgtgttcagtttggtaatgta
ttgcacttcctggtaccttcatacaagagtgcaaaatttagtgtgtaatg
tacctgttagagattttgcatattgctgtagtattgagcatctgaaaaaa
atgcatactgaggggaatatatgtctataaaggatttgctaatatgctta
gataacgcacttacatccagtcacacaagattattgattctgaacaaaag
agtctgatcaggctcaacaatctattcaaatagtatgatcccacacttga
agaaggattgacatttttgacttgaagcctacatgcttggtatctgttac
atgaaaaaattcatgctgaagagaaattctgtaataggctttaagatacc
ttaacaggaatgaatgcattcataagtaaatgtgtgtgtgtggtgggggg
attttcacaaagattttaggccaggacagatatgtgcacgttggaacaca
actttgtggattctactttggacattttttttatgtttcaaatatatttt
tatgcttcaaatatatattttttattttttcaagtgtattagtttatact
taggactaaatagttgtttcattctcagaactgcaaatgaatgccagaga
attttcacagtggctaaagttggttgatgctgatattttatttatttata
tttcatggaaatcccctttctggttttccctctggagcccctatctcatc
ctccctctcatgcttctgtacaggtgctcccacacacactactcctgcat
cccaccctgcattcttctacatggcttaccagaacagggcctgttttccc
atgatgctaaaaggtcatccttgcttacagccagctggagcatggtttcc
tcgtgtgattctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146873976_146874706
seq2: B6Ng01-085O08.b_48_778

seq1  GAATTCCTGTGCTTTGTTCCCTCTTCATGTCATTTGTCCACATTGAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGCTTTGTTCCCTCTTCATGTCATTTGTCCACATTGAATGG  50

seq1  TGTTCAGATTATATTTTGACTTTTGCCTCTTGAGTTTGTTTCATAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGATTATATTTTGACTTTTGCCTCTTGAGTTTGTTTCATAATTCA  100

seq1  TTTTGTCATGAGAATTGGTATTCCATTAGTGATTTGGGCTAGGGGAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCATGAGAATTGGTATTCCATTAGTGATTTGGGCTAGGGGAATTT  150

seq1  TATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT  200

seq1  ATTTATTTTTTAATAGGTTTTTTGGCTTATATTTGTTTATTTATGTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTTTAATAGGTTTTTTGGCTTATATTTGTTTATTTATGTTAAT  250

seq1  TTTTTTATTAGGTATTTTCCTCGTTTACATTTTCAATGCTATCCCAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTAGGTATTTTCCTCGTTTACATTTTCAATGCTATCCCAAAGG  300

seq1  TCCCCCATATCCACCCCCCCCAATCCCCTACCCACCCACTCCCCCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATATCCACCCCCCCCAATCCCCTACCCACCCACTCCCCCTTTTT  350

seq1  GGCCCTGGTGTTCCCCTGTACTGGGGCATATAAAGTTGGCAAGTCCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGTGTTCCCCTGTACTGGGGCATATAAAGTTGGCAAGTCCAATG  400

seq1  GGCCTCTCTTTGCAGTGCTGGCCGACTAGGCCATCTTTTGATGCATATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCTTTGCAGTGCTGGCCGACTAGGCCATCTTTTGATGCATATGC  450

seq1  AGCTAGAGACAAGAGCTCTGGGGTACTGGTTAGTTCATATTGTTGTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGACAAGAGCTCTGGGGTACTGGTTAGTTCATATTGTTGTTCCA  500

seq1  CCTATAGGGTTGCAGTTCCCTTTAGCTCTTTGGGTAGTATCTCTAGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGGGTTGCAGTTCCCTTTAGCTCTTTGGGTAGTATCTCTAGCTCC  550

seq1  TGCATTGGGGGCCGTGTGATCCATCCCATAGCTGACTGTGATCATCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGGGGGCCGTGTGATCCATCCCATAGCTGACTGTGATCATCCATT  600

seq1  TCTGTATTTGCTAGGCGCTGGCATAGTCTCACAAGAGAGAGCTATATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTGCTAGGCGCTGGCATAGTCTCACAAGAGAGAGCTATATCTG  650

seq1  GGTCCTTTCAGCAAAATTTTGCTAGTGTGTGCAATGGTGTCAGCGTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTTCAGCAAAATTTTGCTAGTGTGTGCAATGGTGTCAGCGTTTGG  700

seq1  AAGCTGATTATGGGATGGATCCCTGCATAGG  731
      |||||||||||||||||||||||||||||||
seq2  AAGCTGATTATGGGATGGATCCCTGCATAGG  731

seq1: chr4_146976123_146977252
seq2: B6Ng01-085O08.g_71_1185 (reverse)

seq1  CAAAGAATACACATGGAGGGAACCATGGCTCCAGCTGCCTATGTAGCAGA  50
      |||||||| ||||  |||| |||||| |||||||||| || |  |||| |
seq2  CAAAGAAT-CACA-CGAGGAAACCAT-GCTCCAGCTGGCTGT-AAGCA-A  45

seq1  GGATGACCTTATTGGGCATCAATGGGAAAACAGGCCCTTGGTCCTGTGAA  100
      |||||||||  ||  ||||| |||||||||||||||||  || |||  ||
seq2  GGATGACCT--TTTAGCATC-ATGGGAAAACAGGCCCT--GTTCTGGTAA  90

seq1  GGCCAATGTAGGAGAATGCCAGGGTGGGGATGCAGGAGTAGGTGTGTGTG  150
      |  | |||||| |||||| |||||| |||||||||||||| |||||||||
seq2  G--CCATGTAGAAGAATG-CAGGGT-GGGATGCAGGAGTA-GTGTGTGTG  135

seq1  GGAGCACCTGTACAGAAGCATGGAGAGGGAGGATGGGATAGGGGCTTCCA  200
      ||||||||||||||||||||| ||||||||||||| ||||||||| ||||
seq2  GGAGCACCTGTACAGAAGCAT-GAGAGGGAGGATGAGATAGGGGC-TCCA  183

seq1  GAGGGGAAAACCAAGAAAGGGGA-TTACATGAAATATAAATAAATAAAAT  249
      || ||||||||| |||||||||| || |||||||||||||||||||||||
seq2  GA-GGGAAAACC-AGAAAGGGGATTTCCATGAAATATAAATAAATAAAAT  231

seq1  ATCAGCATCAACCAACTTTAGCCACTGTGAAAATTCTCTGGCATTCATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCATCAACCAACTTTAGCCACTGTGAAAATTCTCTGGCATTCATTT  281

seq1  GCAGTTCTGAGAATGAAACAACTATTTAGTCCTAAGTATAAACTAATACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCTGAGAATGAAACAACTATTTAGTCCTAAGTATAAACTAATACA  331

seq1  CTTGAAAAAAT-AAAAATATATATTTGAAGCATAAAAATATATTTGAAAC  398
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAAAATAAAAAATATATATTTGAAGCATAAAAATATATTTGAAAC  381

seq1  AT-AAAAAAATGTCCAAAGTAGAATCCACAAAGTTGTGTTCCAACGTGCA  447
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAAATGTCCAAAGTAGAATCCACAAAGTTGTGTTCCAACGTGCA  431

seq1  CATATCTGTCCTGGCCT-AAATCTTTGTGAAAATCCCCCCACCACACACA  496
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATATCTGTCCTGGCCTAAAATCTTTGTGAAAATCCCCCCACCACACACA  481

seq1  CACATTTACTTATGAATGCATTCATTCCTGTTAAGGTATCTTAAAGCCTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTACTTATGAATGCATTCATTCCTGTTAAGGTATCTTAAAGCCTA  531

seq1  TTACAGAATTTCTCTTCAGCATGAATTTTTTCATGTAACAGATACCAAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAATTTCTCTTCAGCATGAATTTTTTCATGTAACAGATACCAAGC  581

seq1  ATGTAGGCTTCAAGTCAAAAATGTCAATCCTTCTTCAAGTGTGGGATCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGCTTCAAGTCAAAAATGTCAATCCTTCTTCAAGTGTGGGATCAT  631

seq1  ACTATTTGAATAGATTGTTGAGCCTGATCAGACTCTTTTGTTCAGAATCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGAATAGATTGTTGAGCCTGATCAGACTCTTTTGTTCAGAATCA  681

seq1  ATAATCTTGTGTGACTGGATGTAAGTGCGTTATCTAAGCATATTAGCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTGTGTGACTGGATGTAAGTGCGTTATCTAAGCATATTAGCAAA  731

seq1  TCCTTTATAGACATATATTCCCCTCAGTATGCATTTTTTTCAGATGCTCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTATAGACATATATTCCCCTCAGTATGCATTTTTTTCAGATGCTCA  781

seq1  ATACTACAGCAATATGCAAAATCTCTAACAGGTACATTACACACTAAATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTACAGCAATATGCAAAATCTCTAACAGGTACATTACACACTAAATT  831

seq1  TTGCACTCTTGTATGAAGGTACCAGGAAGTGCAATACATTACCAAACTGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTCTTGTATGAAGGTACCAGGAAGTGCAATACATTACCAAACTGA  881

seq1  ACACATTAACAGGGTTTCTCTACAGACATCTCAACGGATATCTTTGGAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTAACAGGGTTTCTCTACAGACATCTCAACGGATATCTTTGGAAG  931

seq1  CTGACAGTGACCTATGGGGACCTGTGCTGCCCCTTGCCCATGTGTGCTGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTGACCTATGGGGACCTGTGCTGCCCCTTGCCCATGTGTGCTGC  981

seq1  ACCCGTGCAGTGCCTTCCTGGCTGTGCTCATTCACCAGCACCTGGATCTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTGCAGTGCCTTCCTGGCTGTGCTCATTCACCAGCACCTGGATCTG  1031

seq1  TTAGGCCTCACCAGTCATGATTTCTGAACTTCTGAAATTTGACCATAAGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCCTCACCAGTCATGATTTCTGAACTTCTGAAATTTGACCATAAGT  1081

seq1  GAAGTAAAAGATGTTTAATTGAACAGAAGAATTC  1130
      ||||||||||||||||||||||||||||||||||
seq2  GAAGTAAAAGATGTTTAATTGAACAGAAGAATTC  1115