BAC Information

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BAC

Clone NameB6Ng01-087B13
Chromosome4 (Build37)4 (Build37)
Map Location 147,166,056 - 147,166,696146,766,444 - 146,767,580
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010694, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087B13.bB6Ng01-087B13.g
ACCDH900319DH900320
length9541,113
definitionDH900319|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B13, 5' end.DH900320|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(147,166,056 - 147,166,696)(146,766,444 - 146,767,580)
sequence
gaattcttctttccttaggcaaaccttatactaatgccaaaaggataaca
ttatgtaaaaggcaaagaagagaaacactagaaagacatcatacaaagtt
ggtgtacatctacaccgcaaacaggtaaacagaagaaaatatatggccaa
agtcttccagtgaaaaacagacagcatattcaacaaatggtgctggttca
agtgtcagtccacatgtagaagaatgccaattgattcactcctactgcct
tgtacaatgctcaagtcaacatggatcaagaacctccacataaaaccaga
tacactgaatctaatagaagagaaaggggggaaaagccttcaacacatct
gcaaagggtaaattttcctgaacagaacagaaatggctcaagttcaaagg
tcaactatggacaaatgggatctcataaaattgaaaaacttctgtaaggc
aaaggacactgtcaataggaccaaacagcaacccccaaaatggtaaaaga
tcttaaccattcctctgtctgacagagggcaaatggacactatataataa
gaactcaagaagttagaatctagagaaccaaataaccctataaaaaatag
ggtatgcagccatggaaggagttacagagacaaagtttggagctgagact
gaaggaagggccatccagagactgccctacccggggatccatcccataaa
caacccccaaacccagacactatttcaactgtcaacaagattttgctgac
aggaccctgatatgcctgtctcctctgaagctacgccagttcctggcaaa
taaactggatgttcaaccaggaggtgatggagcatgcctttaaccccagc
acttgggaggtagacgcattaggatttctgagttcgaggccagcctggtc
tacaaagtgagttccaggacagccagggctataccgaaaaaccctgtcta
gaaa
gaattcttccaaaagggaaacttttcaaatacattgatggtttgaatcct
ttattttggcctatctcttagaatgtaacagataatttatacaggcaaga
atcttaacaaatataatatatgctgaaatatctttgacttcatttcagtg
cagaaaaaatatgtaaaatattttttatgggaaaaatagttctcctgggg
aaatgtggcatatgttttacacaggtaatattcttttcaacagttagtgc
tctaaactagagaattatgaatctgaaaacttttgaaaaccttcatgcaa
tgttcaaatcttagataatgtcaactattatgctggcagtaactctgaat
atatgataatgaagaaacattttcattaaacttttacttgttcaccctca
aatattatatgatgaagtcaggtgtgaaagccagaagaatatgatgttgt
gcaacaattcatggagatagaaatgatccattccaaaagaaaacgagtgt
actatcgccttcaaaatgtctaataaaactggcagcattttgtatattta
attcaaatgaagaaattgacacagattgtacttgatagtgtatttgacaa
actgagccaccaagactgcatgttcttaatcctataatatgcctacagat
gtgaagtgtcctttgagtatccagtattcattattcttatcacgtcaatg
tgacaaatgatttattggtttcacgtttcaggatagtgactgactatgag
tcccttatgctctgtcaacatctccttcctcattgccctgtaaataaagc
tgaatattttaacaaggttgacttggctgttttcagtttgcacttataat
tagatgaataaatgttgcatcatcgctggaactatttctcataaagtatt
tgctgaagtcatgaatattttctgtaaacctgtaacttaaacttaatatt
gtgattgtcagctggtcaataacaccttgacccacatacgatatatgatt
gtatatagtgtttagcattagaaatttagcacagtgtatagagatgatga
tttgtgtactaaaacaggatgattctatgcaatattccagctactgctcg
atagtactagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147166056_147166696
seq2: B6Ng01-087B13.b_49_492

seq1  GAATTCTTCTTTCCTTAGGCAAACCTTATACTAATGCCAAAAGGATAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTCCTTAGGCAAACCTTATACTAATGCCAAAAGGATAACA  50

seq1  TTGTGTAAAAGGCAAAGAAGAGAAACACTAGAAAGTCATCATACAAAGTT  100
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTATGTAAAAGGCAAAGAAGAGAAACACTAGAAAGACATCATACAAAGTT  100

seq1  GGTATACATCTACACCCCAAACAGGTAAACAGAAGAAAATATATGGCCAA  150
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGTGTACATCTACACCGCAAACAGGTAAACAGAAGAAAATATATGGCCAA  150

seq1  AGACTTCCAGTGAAAAACAGACAGCACATTCAACAAATGGTGCTGGATCA  200
      || ||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  AGTCTTCCAGTGAAAAACAGACAGCATATTCAACAAATGGTGCTGGTTCA  200

seq1  AGTGTCAGTCCACATTTAGAAGAATGCCAATTGATTCACTCTTACTGCCT  250
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  AGTGTCAGTCCACATGTAGAAGAATGCCAATTGATTCACTCCTACTGCCT  250

seq1  TGTACAATGCTCAAGTCAACGTGGGTCAAGAACCTCCACATAAAACCAGA  300
      |||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  TGTACAATGCTCAAGTCAACATGGATCAAGAACCTCCACATAAAACCAGA  300

seq1  TACATTGAATCTAATACAAGAGAAAGGGGGAAAAAAGCCTTCAACACATC  350
      |||| ||||||||||| |||||||||||||  ||||||||||||||||||
seq2  TACACTGAATCTAATAGAAGAGAAAGGGGG-GAAAAGCCTTCAACACATC  349

seq1  TGCAAAGGGTAAATTTTCCTGAATAGAACAGAAATGGCTCAAGTTCAAAG  400
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCAAAGGGTAAATTTTCCTGAACAGAACAGAAATGGCTCAAGTTCAAAG  399

seq1  GTCAACTATGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTTC  450
      ||||||||||| |   || |||  ||||     ||| |       |||||
seq2  GTCAACTATGGACAAATGGGAT--CTCA-----TAAAATTGAAAAACTTC  442

seq1  T-CTTCAGAAGGTCTGCAGTTCAAATCCCAGCAACCACATGGTGGCTCAC  499
      |                                                 
seq2  TG------------------------------------------------  444

seq1  AATCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAG  549
                                                        
seq2  --------------------------------------------------  444

seq1  CTATAGTGTACTTACATATAAATAAATAAATCTTTTTTAAAAAAAAGGTC  599
                                                        
seq2  --------------------------------------------------  444

seq1  AACTATGGACAAATGGGATCTCATAAAATTGAAAAACTTCTG  641
                                                
seq2  ------------------------------------------  444

seq1: chr4_146766444_146767580
seq2: B6Ng01-087B13.g_67_1179

seq1  GAATTCTTCCAAAAGGGAAACTTTTCAAATACATTGATGGTTTGAATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCAAAAGGGAAACTTTTCAAATACATTGATGGTTTGAATCCT  50

seq1  TTATTTTGGCCTATCTCTTAGAATGTAACAGATAATTTATACAGGCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGGCCTATCTCTTAGAATGTAACAGATAATTTATACAGGCAAGA  100

seq1  ATCTTAACAAATATAATATATGCTGAAATATCTTTGACTTCATTTCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAACAAATATAATATATGCTGAAATATCTTTGACTTCATTTCAGTG  150

seq1  CAGAAAAAATATGTAAAATATTTTTTTATGGGAAAAAAAGTTCTCCTGGG  200
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  CAGAAAAAATATGTAAAATA-TTTTTTATGGGAAAAATAGTTCTCCTGGG  199

seq1  GAAATGTGGCATATGTTTTACACGGGTAATATTCTTTTCAACAGTTAGTG  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAAATGTGGCATATGTTTTACACAGGTAATATTCTTTTCAACAGTTAGTG  249

seq1  CTCTAAACTAGAGAATTATGAATCTGAAAACTTTTGAAAACCTTCATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAACTAGAGAATTATGAATCTGAAAACTTTTGAAAACCTTCATGCA  299

seq1  ATGTTCAAATCTTAGATAATGTCAACTATTATGCTGGCAGTAACTCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAATCTTAGATAATGTCAACTATTATGCTGGCAGTAACTCTGAA  349

seq1  TATATGATAATGAAGAAACATTTTCATTAAACTTTTACTTGTTCACCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATAATGAAGAAACATTTTCATTAAACTTTTACTTGTTCACCCTC  399

seq1  AAATATTATATGATGAAGTCAGGTGTGAAAGCCAGAAGAATATGATGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTATATGATGAAGTCAGGTGTGAAAGCCAGAAGAATATGATGTTG  449

seq1  TGCAACAATTCATGGAGATAGAAATGATCCATTCCAAAAGGAAACTAAAT  500
      |||||||||||||||||||||||||||||||||||||||| ||||     
seq2  TGCAACAATTCATGGAGATAGAAATGATCCATTCCAAAAGAAAAC-----  494

seq1  AAAGAGTGTACTATCGCCTTCAAAATGTCTAATAAAACTGGCAGCATTTT  550
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ---GAGTGTACTATCGCCTTCAAAATGTCTAATAAAACTGGCAGCATTTT  541

seq1  GTATATTTAATTCAAATGAAGAAATTGACACAGATTGTACTTGATAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTAATTCAAATGAAGAAATTGACACAGATTGTACTTGATAGTGT  591

seq1  ATTTGACAAACTGAGCCACCAAGACTGCATGTTCTTAATCCTATAATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAAACTGAGCCACCAAGACTGCATGTTCTTAATCCTATAATATG  641

seq1  CCTACAGATGTGAAGTGTGCTTTGAGTATCCAGTATTCATTATTCTTATC  700
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTACAGATGTGAAGTGTCCTTTGAGTATCCAGTATTCATTATTCTTATC  691

seq1  ACGTCAATGTGACAAATGATTTATTGGTTTCACGTTTCAGGATAGTGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCAATGTGACAAATGATTTATTGGTTTCACGTTTCAGGATAGTGACT  741

seq1  GACTATGAGTCCCTTATGCTCTGTCAACATCTCCTTCCTCATTGCCCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGAGTCCCTTATGCTCTGTCAACATCTCCTTCCTCATTGCCCTGT  791

seq1  AAATAAAGCTGAATATTTTAACAAGGTTGACTTGGCTGTTTTCAGTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGCTGAATATTTTAACAAGGTTGACTTGGCTGTTTTCAGTTTGC  841

seq1  ACTTATAATTAGATGAATAAATGTTGCATCATCGCTGGAACTATTTCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAATTAGATGAATAAATGTTGCATCATCGCTGGAACTATTTCTCA  891

seq1  TAAAGTATTTGCTGAAGTCATGAATATTTTCTGTAAACCTGTAACTTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATTTGCTGAAGTCATGAATATTTTCTGTAAACCTGTAACTTAAA  941

seq1  CTTAATATTTGTGATTGTCAGCTGGTCAATAACAACCTTGACCCACATAC  1000
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTAATA-TTGTGATTGTCAGCTGGTCAATAAC-ACCTTGACCCACATAC  989

seq1  GAATAATATGAATTGTATATAAGTGTTTAGCATTAGAAAATTTAGCAACA  1050
      ||   ||||| ||||||||| ||||||||||||||| ||||||||| |||
seq2  GA--TATATG-ATTGTATAT-AGTGTTTAGCATTAG-AAATTTAGC-ACA  1033

seq1  GTGTATTAGAGATGATGATTTGTGTTAACTAAAACAGGGATGATTCTATG  1100
      ||||| |||||||||||||||||||  ||||||||| |||||||||||||
seq2  GTGTA-TAGAGATGATGATTTGTGT--ACTAAAACA-GGATGATTCTATG  1079

seq1  CAATATTCCAGGCTTACTGCTCAATTAGTACTAGTTT  1137
      |||||||||||   |||||||| | ||||||||||||
seq2  CAATATTCCAG--CTACTGCTCGA-TAGTACTAGTTT  1113