BAC Information

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BAC

Clone NameB6Ng01-087C15
Chromosome4 (Build37)
Map Location 12,733,833 - 12,734,468
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh17, Ppm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneOTTMUSG00000004461, LOC100039988, Runx1t1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087C15.bB6Ng01-087C15.g
ACCDH900369DH900370
length649205
definitionDH900369|Mus musculus domesticus DNA, BAC clone: B6Ng01-087C15, 5' end.DH900370|Mus musculus domesticus DNA, BAC clone: B6Ng01-087C15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtaaactgtagctttggatcaccaatgtaccagtcaagactc
tgctcattaagtctgcctatgttgaataattggaacaccaaagccaacta
gaataattctgttttaagctagaatatgcactggatagatgaaactgtta
gcatttcttctaggctctgccccacaattacctggcaacaggcaggtgtt
cctgactcataaatggtactgcttgccccctccttactctcttgctttcc
ttactgcttacccctccttactctcttgctttccttactgcttgccccct
ctttactctcttgctttccttactgcctttctttcttccctctctgtcct
ttctttcccagtcccttccccctctctgtccatgtgttcatggctggcct
ccactactcctctactttctctctctctctctctctctctctctctctct
ctctctctctctctctctctcccactttactacccccttaacgcccaccc
ttcccattccctaaataaactctattaatttataatagagtctgtagacc
ctactataccatcatagttgtgtggctttattcatgggggagggatgccc
ctacatatgcctgcagaaacaccgcctttccccatttcataccgcgcct
acccagaaagacaaatatggtatctactcaccacttatagcggacattag
tcattaagtaagtgataaccaagctataatccataaaccagttaggaagt
taggtcaagacgacaagggagctcatggatcccccttaaaggggagattg
agtagattttacaggtagacggggtgggtggggactggaagaggtgggga
ggtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12733833_12734468
seq2: B6Ng01-087C15.b_43_676

seq1  GAATTCATGTAAACTGTAGCTTTGGATCACCAATGTACCAGTCAAGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAAACTGTAGCTTTGGATCACCAATGTACCAGTCAAGACTC  50

seq1  TGCTCATTAAGTCTGCCTATGTTGAATAATTGGAACACCAAAGCCAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATTAAGTCTGCCTATGTTGAATAATTGGAACACCAAAGCCAACTA  100

seq1  GAATAATTCTGTTTTAAGCTAGAATATGCACTGGATAGATGAAACTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTCTGTTTTAAGCTAGAATATGCACTGGATAGATGAAACTGTTA  150

seq1  GCATTTCTTCTAGGCTCTGCCCCACAATTACCTGGCAACAGGCAGGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTTCTAGGCTCTGCCCCACAATTACCTGGCAACAGGCAGGTGTT  200

seq1  CCTGACTCATAAATGGTACTGCTTGCCCCCTCCTTACTCTCTTGCTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTCATAAATGGTACTGCTTGCCCCCTCCTTACTCTCTTGCTTTCC  250

seq1  TTACTGCTTACCCCTCCTTACTCTCTTGCTTTCCTTACTGCTTGCCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCTTACCCCTCCTTACTCTCTTGCTTTCCTTACTGCTTGCCCCCT  300

seq1  CTTTACTCTCTTGCTTTCCTTACTGCCTTTCTTTCTTCCCTCTCTGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTCTCTTGCTTTCCTTACTGCCTTTCTTTCTTCCCTCTCTGTCCT  350

seq1  TTCTTTCCCAGTCCCTTCCCCCTCTCTGTCCATGTGTTCATGGCTGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCCAGTCCCTTCCCCCTCTCTGTCCATGTGTTCATGGCTGGCCT  400

seq1  CCACTACTCCTCTACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACTCCTCTACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  450

seq1  CTCTCTCTCTCTCTCTCTCTCCTACTTTACTACCCCCTTAACGCCCACCC  500
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCCCACTTTACTACCCCCTTAACGCCCACCC  500

seq1  TTCCCATTCCCTAAATAAACTCTATTTATTTATAATAGAGTCTGTAGACC  550
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTCCCATTCCCTAAATAAACTCTATTAATTTATAATAGAGTCTGTAGACC  550

seq1  CTACTATACCATCATAGTTGTGTGGCTGTTATCTCATGGGGGAGGGATGC  600
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  CTACTATACCATCATAGTTGTGTGGCT-TTAT-TCATGGGGGAGGGATGC  598

seq1  CCCTACATATGCCTGCAGAAACACCGCCTTTCCCCA  636
      ||||||||||||||||||||||||||||||||||||
seq2  CCCTACATATGCCTGCAGAAACACCGCCTTTCCCCA  634