BAC Information

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BAC

Clone NameB6Ng01-088B15
Chromosome4 (Build37)
Map Location 86,720,248 - 86,888,368
singlet/doubletdoublet
Overlap geneSlc24a2
Upstream geneAdamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l
Downstream geneMllt3, BC057079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088B15.bB6Ng01-088B15.g
ACCDH901049DH901050
length1,0171,100
definitionDH901049|Mus musculus domesticus DNA, BAC clone: B6Ng01-088B15, 5' end.DH901050|Mus musculus domesticus DNA, BAC clone: B6Ng01-088B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,887,427 - 86,888,368)(86,720,248 - 86,721,380)
sequence
gaattcaaatgcatcaaaatacatgaagaaagaaatctaaaaaaaaaaaa
aaaaaaagcctgtgctagaaaagctattgcctagtagagcacttggttag
tacagtcaaggccctggggtcaatgcccagcaatgcaaaaataaataagt
gaaaaagtattatgaattcaatagcctgctacattgattagatactccct
caaggaaagaagtggcttatgtctgccattctgaccaaaattctgataac
aaaatgtatgtcactgtaagacagaaactttatagtacacgttgtagttt
caacgttaaaataatagtctcaagatggggctgaccatttgacttggtgc
caaatgactgattatgtctttgaattctctactgtgagaaatgcaatata
gctgaagaacaaaacaaggacttaaaaacagctattatagatatgatcaa
ggaggccctaaagagagagagagaaacagagacagacacagagagagaga
gagtccatcgtaaaatctatgaaaacacaaatggtagaagtagaaataga
atcaacagaggaaactcaaactgaaggaaagctggaaatgaaaaaaaaaa
atagaaacttgaacaagaacctcagaggcaagtctcaccaacagaatcca
agagatggaagaatgaatctcagacattgaagacaaaaatagaaggaatg
gatgcatcagtttaaaaaacaaagttaaacataaaaataaccagattcaa
ataatccaggaaatctaggacactatgaaaaagaccaaatctatgaataa
taggaataaaggaagaagaagaaactcaggtcaaaggcatagaaaatatt
ttcaataaaatcatagcagaaaatttcctaaccttaagaaggagtcaagg
tataagaggcatataggacactgaatagactaacacacacacatacacac
acacatacacacacacacacatacacacaccatatttacacacccgcata
tacacccgcacgtacac
gaattccctatgtagcccaggctggccttgaacttacagagatctgcttg
cttcttcctcctgagtactgggattaaaggtgtgcgccaccatggctgac
ttaatgttacttttttatttattattattgaacttgatctaaaatcttaa
caaggaaattttctgtggtcgggtaaaattaaaacctatcctctgatttt
atttttgttaaaaattaaaatgaaaacattttcaccaagtcttccaaacc
tctctatcacatatttcccataagagaccccataattaaacacatttgga
aaggctgatattttctagaacaactctttgagaacttcagccatcaacac
agtgtaacccaaaagaattatggtaattttgaccactttggcagtatttc
catgttactgaccatatgtcttttactccagaaaattcttttttttaaag
atttatttattattattatatctaagtacactgtagctgtcttcagatgc
accagaagagggcgtcagatctcattacggatggttgtgagccaccatgt
gcttgctgggatttgaactcaggaccttcggaagagcagtaggtgctctt
aaccactgagccatctctccacccccagaaaattcttattaagggtcatg
gttcaaaaatttggtggcaaacctaaaaccggttgcaggattgaagtatg
ggcaaagtctcagcatgtaatacaaggagaaaccaacagtgattttatta
taattgatgttctattaaagctgtattcccaacccagcagagtttgaaga
tgcatgaatgggaatatttgtgttcagtgacagaaaacattctgagctct
tcaaaggcagcctggagtttgagctgtaccttgagtttagagtatcctct
gggcgctcagtgaatgtcatgtctttgctctgatgtaatgggggaagtat
tacagggtcacagatattcatgacatcccttcactaaaagctgcaattaa
cgcaccatagcattagttaagaggaacgatcagcaagttcaaaacattct
agggcaaggtagcagctaatgcatggaaatgagtactgttgttgacacaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86887427_86888368
seq2: B6Ng01-088B15.b_48_988 (reverse)

seq1  TGTGTGTGTTAGTCTATTCAGTGTCCTATATGCCTCTTATACCTTGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTAGTCTATTCAGTGTCCTATATGCCTCTTATACCTTGACTC  50

seq1  CTTCTTAAGGTTAGGAAATTTTTCTGCTATGATTTTATTGAAAATATTTT  100
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTCTTAAGGTTAGGAAA-TTTTCTGCTATGATTTTATTGAAAATATTTT  99

seq1  CTATGCCTTTGACCTGAGTTTCTTCTTCTTCCTTTATTCCTATTATTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCTTTGACCTGAGTTTCTTCTTCTTCCTTTATTCCTATTATTCAT  149

seq1  AGATTTGGTCTTTTTCATAGTGTCCTAGATTTCCTGGATTATTTGAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGTCTTTTTCATAGTGTCCTAGATTTCCTGGATTATTTGAATCT  199

seq1  GGTTATTTTTATGTTTAACTTTGTTTTTTAAACTGATGCATCCATTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTTTATGTTTAACTTTGTTTTTTAAACTGATGCATCCATTCCTT  249

seq1  CTATTTTTGTCTTCAATGTCTGAGATTCATTCTTCCATCTCTTGGATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTGTCTTCAATGTCTGAGATTCATTCTTCCATCTCTTGGATTCT  299

seq1  GTTGGTGAGACTTGCCTCTGAGGTTCTTGTTCAAGTTTCTATTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGAGACTTGCCTCTGAGGTTCTTGTTCAAGTTTCTATTTTTTTTT  349

seq1  TTCATTTCCAGCTTTCCTTCAGTTTGAGTTTCCTCTGTTGATTCTATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCCAGCTTTCCTTCAGTTTGAGTTTCCTCTGTTGATTCTATTTC  399

seq1  TACTTCTACCATTTGTGTTTTCATAGATTTTACGATGGACTCTCTCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTACCATTTGTGTTTTCATAGATTTTACGATGGACTCTCTCTCTC  449

seq1  TCTGTGTCTGTCTCTGTTTCTCTCTCTCTCTTTAGGGCCTCCTTGATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCTGTCTCTGTTTCTCTCTCTCTCTTTAGGGCCTCCTTGATCAT  499

seq1  ATCTATAATAGCTGTTTTTAAGTCCTTGTTTTGTTCTTCAGCTATATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAATAGCTGTTTTTAAGTCCTTGTTTTGTTCTTCAGCTATATTGC  549

seq1  ATTTCTCACAGTAGAGAATTCAAAGACATAATCAGTCATTTGGCACCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCACAGTAGAGAATTCAAAGACATAATCAGTCATTTGGCACCAAG  599

seq1  TCAAATGGTCAGCCCCATCTTGAGACTATTATTTTAACGTTGAAACTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGGTCAGCCCCATCTTGAGACTATTATTTTAACGTTGAAACTACA  649

seq1  ACGTGTACTATAAAGTTTCTGTCTTACAGTGACATACATTTTGTTATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTACTATAAAGTTTCTGTCTTACAGTGACATACATTTTGTTATCAG  699

seq1  AATTTTGGTCAGAATGGCAGACATAAGCCACTTCTTTCCTTGAGGGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGTCAGAATGGCAGACATAAGCCACTTCTTTCCTTGAGGGAGTA  749

seq1  TCTAATCAATGTAGCAGGCTATTGAATTCATAATACTTTTTCACTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCAATGTAGCAGGCTATTGAATTCATAATACTTTTTCACTTATTT  799

seq1  ATTTTTGCATTGCTGGGCATTGACCCCAGGGCCTTGACTGTACTAACCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCATTGCTGGGCATTGACCCCAGGGCCTTGACTGTACTAACCAA  849

seq1  GTGCTCTACTAGGCAATAGCTTTTCTAGCACAGGCTTTTTTTTTTTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTACTAGGCAATAGCTTTTCTAGCACAGGCTTTTTTTTTTTTTTT  899

seq1  TTTTAGATTTCTTTCTTCATGTATTTTGATGCATTTGAATTC  942
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATTTCTTTCTTCATGTATTTTGATGCATTTGAATTC  941

seq1: chr4_86720248_86721380
seq2: B6Ng01-088B15.g_68_1167

seq1  GAATTCCCTATGTAGCCCAGGCTGGCCTTGAACTTACAGAGATCTGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATGTAGCCCAGGCTGGCCTTGAACTTACAGAGATCTGCTTG  50

seq1  CTTCTTCCTCCTGAGTACTGGGATTAAAGGTGTGCGCCACCATGGCTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCTCCTGAGTACTGGGATTAAAGGTGTGCGCCACCATGGCTGAC  100

seq1  TTAATGTTACTTTTTTATTTATTATTATTGAACTTGATCTAAAATCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTACTTTTTTATTTATTATTATTGAACTTGATCTAAAATCTTAA  150

seq1  CAAGGAAATTTTCTGTGGTCGGGTAAAATTAAAACCTATCCTCTGATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAATTTTCTGTGGTCGGGTAAAATTAAAACCTATCCTCTGATTTT  200

seq1  ATTTTTGTTAAAAATTAAAATGAAAACATTTTCACCAAGTCTTCCAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTAAAAATTAAAATGAAAACATTTTCACCAAGTCTTCCAAACC  250

seq1  TCTCTATCACATATTTCCCATAAGAGACCCCATAATTAAACACATTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATCACATATTTCCCATAAGAGACCCCATAATTAAACACATTTGGA  300

seq1  AAGGCTGATATTTTCTAGAACAACTCTTTGAGAACTTCAGCCATCAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGATATTTTCTAGAACAACTCTTTGAGAACTTCAGCCATCAACAC  350

seq1  AGTGTAACCCAAAAGAATTATGGTAATTTTGACCACTTTGGCAGTATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAACCCAAAAGAATTATGGTAATTTTGACCACTTTGGCAGTATTTC  400

seq1  CATGTTACTGACCATATGTCTTTTACTCCAGAAAATTCTTTTTTTTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTACTGACCATATGTCTTTTACTCCAGAAAATTCTTTTTTTTAAAG  450

seq1  ATTTATTTATTATTATTATATCTAAGTACACTGTAGCTGTCTTCAGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTATTATTATATCTAAGTACACTGTAGCTGTCTTCAGATGC  500

seq1  ACCAGAAGAGGGCGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGAGGGCGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGT  550

seq1  GCTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTAGGTGCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTAGGTGCTCTT  600

seq1  AACCACTGAGCCATCTCTCCACCCCCAGAAAATTCTTATTAAGGGTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGAGCCATCTCTCCACCCCCAGAAAATTCTTATTAAGGGTCATG  650

seq1  GTTCAAAAATTTGGTGGCAAACCTAAAACCGGTTGCAGGATTGAAGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAAATTTGGTGGCAAACCTAAAACCGGTTGCAGGATTGAAGTATG  700

seq1  GGCAAAGTCTCAGCATGTAATACAAGGAGAAACCAACAGTGATTTTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGTCTCAGCATGTAATACAAGGAGAAACCAACAGTGATTTTATTA  750

seq1  TAATTGATGTTCTATTAAAGCTGTATTCCCAACCCAGCAGAGTTTGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGATGTTCTATTAAAGCTGTATTCCCAACCCAGCAGAGTTTGAAGA  800

seq1  TGCATGAATGGGAATATTTGTGTTTCAGTGACAGAAAACATTCTGAGCTC  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGCATGAATGGGAATATTTGTG-TTCAGTGACAGAAAACATTCTGAGCTC  849

seq1  TTCAAAGGCAGCCTGGAGTTTGAGCTGTACCTTGAGTTTAGAGTATCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGCAGCCTGGAGTTTGAGCTGTACCTTGAGTTTAGAGTATCCTC  899

seq1  TGGGCGCTCAGTGAATGTCATGTCTTTGCTCTGAGTGTTAATGGGGGAAG  950
      |||||||||||||||||||||||||||||||||| || ||||||||||||
seq2  TGGGCGCTCAGTGAATGTCATGTCTTTGCTCTGA-TG-TAATGGGGGAAG  947

seq1  TATTTACAGGGTCACAGATATTTTCATGACCATCCCTTTCAACCTTAAAA  1000
      || |||||||||||||||||  ||||||| ||||||||    |  |||||
seq2  TA-TTACAGGGTCACAGATA--TTCATGA-CATCCCTT----CACTAAAA  989

seq1  GCCTGCAACATTTTAAAACGCACCATAGCATTTAGTTATAGAGGATACAG  1050
      | ||||||    ||  |||||||||||||| ||||||| |||||| || |
seq2  G-CTGCAA----TT--AACGCACCATAGCA-TTAGTTA-AGAGGA-AC-G  1028

seq1  ATCAGCAAAGTTCAAAACATTCTAGGGGCAGAGGTAGCAGGCTTAGATGC  1100
      |||||| ||||||||||||||||| ||||| |||||||| |||   ||||
seq2  ATCAGC-AAGTTCAAAACATTCTA-GGGCA-AGGTAGCA-GCT--AATGC  1072

seq1  AATGGAAATGAAGTCACTGTTTGTTGAACACAA  1133
       ||||||||| ||| |||| |||||| ||||||
seq2  -ATGGAAATG-AGT-ACTG-TTGTTG-ACACAA  1100