BAC Information

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BAC

Clone NameB6Ng01-089A08
Chromosome4 (Build37)
Map Location 27,516,406 - 27,517,477
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040691, Tpm3-rs2, LOC100040842, LOC100040735, LOC230044, LOC665141, LOC100040773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089A08.bB6Ng01-089A08.g
ACCDH901715DH901716
length1,0711,261
definitionDH901715|Mus musculus domesticus DNA, BAC clone: B6Ng01-089A08, 5' end.DH901716|Mus musculus domesticus DNA, BAC clone: B6Ng01-089A08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtataccaggctggcctcgaactcggaaatctgcctgcc
tctgcctcccaagtgctgggactaaaggcctgcatcaacactgcctggct
cccatctcacacttcttgtgagtccctgtcttactacaactcactcagat
acaagggagacacactcctcatagtatttcaggatatcccttgagaaccc
cttttcctgagtcccatatacctcaattctgtgtcctcccctaaatgtct
ccacccatttcatcaacctcttagtggcctgcctttactcctgtttccat
ggtcctatcactgtccctctaggtcttgtgagctgtgggcacttctttgt
taattcttgttaaccccagtcaggtaggtacctgctgggagctacttgtc
ggctgctcttggctgttgtcccaaggactgtgtaggtcttacgttttatt
tctttccccttcagttaactctctctttttgtctttatttttctctatta
tgtgtcttaaagagagaacttgtaattgacctctttctcagaaatgtgtt
tttagttttgtttttaattttttcttttgagtattgattattaatcaagg
cccattgatactactgatattgttatgattatagtaaataaagcatgcag
cattattctgtgtatgtttgtgtaaaatgttattttcatatcaagattat
attatcaaaattgttttaaatttgttttgtatatgtacagtgatggtcct
agacttaggataccactctaaaatattaagcctatttattcattcaggta
cttggaatgtgtcattgattactagatttttattttaaatacacaagcat
gggatagtttaatactcatcactcatataaaaataactcttaaatttata
gtaacacatcgtttggggatgaagagatggctcagcagttaagagcactg
actgcttcatttttcttgagtttcatgttgtttaggaaattgtatcttat
atcgggggtatcctaggttttgggctagtatccacttatcagtgagtaca
tattgggtgagtcctttgtga
gaattcagggatcaaaaaggcgtggaaacttgtcccaaagccaggaacct
taactcgtcccaaaaccgtgaacctttcgttaccttgtgcccgcttcctg
gcaactttatgcttgcctctattttatccaaggtccttcccaaactcctg
gggttgtaagattcacttaccatgaacttaccctgccggcaaacactgac
tgctgaaagttctgaactcggtgggggagtcgggtccctgtaagggccgc
caattgtcgcatctgctctcagccagcaagaacgacacgaccaccagtcc
ttctaacagcagtttattcagtcttcatctttctcttcatcagtaacgtt
ccccagctgaagagttctgaatccacgccggatccttctcaacagtctgt
tttgctggaacctttattaaccactccttccccatgatgcagttctgaat
tctccctgtagcaggggggtcttcgctcgtgcctgaagatgtttcttgtc
tcgggtttcagcaccacttgttgcacgtgcccaactgaccaggaagaacg
acgctacaacaggatccttctgcacacgtttattccatcctgtttcttct
ttctctatatctcccttgtttatatctccctcatgtttatatctcccttg
tttatatctccccttttatatcttccccttgtttatatatcccttgttta
tatatcccttgtttatatcttccttgtttatatctctcccaaaccctggg
cctctcactcttaaatactctcagttcccatccacagcaggccacgccac
ttcaccaggcacgaagcttcagctaatcagggcagcaggggcatttctcc
atcaaaatggattcacccatatcctggtacacctgcgcagctctcaagat
gtttgtgggcttatatgaggaagtcaggtgcaaatcttagctgcagtcct
ggtgcctttgagactgcggccacacctgctctcacagaccataagcatcc
acttcttgtgtttgctaggcccagaatagcctcacaagggacagctttat
caggttcttttaagcaaatcttgcttagggtatgcatgtgtcagcgtttg
gaggctgattaatgggatggatcctggatggaatgtctaatggcctccct
ttgtcagctctacttctccggtaacctctctaggattgtgatcacactct
aataggactatggtcccaacctggctcgtgtccttgtagtatagtgtatg
ttacacaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_27516406_27517477
seq2: B6Ng01-089A08.b_46_1116 (reverse)

seq1  TCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATACTAGCC  50
      ||||||||| |||||| |||||||||||||||||||||||||||||||||
seq2  TCACAAAGG-ACTCACCCAATATGTACTCACTGATAAGTGGATACTAGCC  49

seq1  CAAAACCTAGGATACCCACGATATAAGATACAATTTCCTAAAC-ACATGA  99
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  CAAAACCTAGGATACCCCCGATATAAGATACAATTTCCTAAACAACATGA  99

seq1  AACTCAAGAAAAATGAAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGAAAAATGAAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCT  149

seq1  TCATCCCCAAACGATGTGTTACTTATAAATTTAAGAGTTATTTTTATATG  199
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCATCCCCAAACGATGTGTTAC-TATAAATTTAAGAGTTATTTTTATATG  198

seq1  AGTGATGAGTATTAAACTATCCCATGCTTGTGTATTTAAAATAAAAATCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGAGTATTAAACTATCCCATGCTTGTGTATTTAAAATAAAAATCT  248

seq1  AGTAATCAATGACACATTCCAAGTACCTGAATGAATAAATAGGCTTAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCAATGACACATTCCAAGTACCTGAATGAATAAATAGGCTTAATA  298

seq1  TTTTAGAGTGGTATCCTAAGTCTAGGACCATCACTGTACATATACAAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAGTGGTATCCTAAGTCTAGGACCATCACTGTACATATACAAAAC  348

seq1  AAATTTAAAACAATTTTGATAATATAATCTTGATATGAAAATAACATTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAAACAATTTTGATAATATAATCTTGATATGAAAATAACATTTT  398

seq1  ACACAAACATACACAGAATAATGCTGCATGCTTTATTTACTATAATCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAACATACACAGAATAATGCTGCATGCTTTATTTACTATAATCATA  448

seq1  ACAATATCAGTAGTATCAATGGGCCTTGATTAATAATCAATACTCAAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATCAGTAGTATCAATGGGCCTTGATTAATAATCAATACTCAAAAG  498

seq1  AAAAAATTAAAAACAAAACTAAAAACACATTTCTGAGAAAGAGGTCAATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTAAAAACAAAACTAAAAACACATTTCTGAGAAAGAGGTCAATT  548

seq1  ACAAGTTCTCTCTTTAAGACACATAATAGAGAAAAATAAAGACAAAAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTCTCTCTTTAAGACACATAATAGAGAAAAATAAAGACAAAAAGA  598

seq1  GAGAGTTAACTGAAGGGGAAAGAAATAAAACGTAAGACCTACACAGTCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTAACTGAAGGGGAAAGAAATAAAACGTAAGACCTACACAGTCCT  648

seq1  TGGGACAACAGCCAAGAGCAGCCGACAAGTAGCTCCCAGCAGGTACCTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAACAGCCAAGAGCAGCCGACAAGTAGCTCCCAGCAGGTACCTAC  698

seq1  CTGACTGGGGTTAACAAGAATTAACAAAGAAGTGCCCACAGCTCACAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGGGGTTAACAAGAATTAACAAAGAAGTGCCCACAGCTCACAAGA  748

seq1  CCTAGAGGGACAGTGATAGGACCATGGAAACAGGAGTAAAGGCAGGCCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGGGACAGTGATAGGACCATGGAAACAGGAGTAAAGGCAGGCCAC  798

seq1  TAAGAGGTTGATGAAATGGGTGGAGACATTTAGGGGAGGACACAGAATTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGTTGATGAAATGGGTGGAGACATTTAGGGGAGGACACAGAATTG  848

seq1  AGGTATATGGGACTCAGGAAAAGGGGTTCTCAAGGGATATCCTGAAATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATATGGGACTCAGGAAAAGGGGTTCTCAAGGGATATCCTGAAATAC  898

seq1  TATGAGGAGTGTGTCTCCCTTGTATCTGAGTGAGTTGTAGTAAGACAGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGAGTGTGTCTCCCTTGTATCTGAGTGAGTTGTAGTAAGACAGGG  948

seq1  ACTCACAAGAAGTGTGAGATGGGAGCCAGGCAGTGTTGATGCAGGCCTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAGAAGTGTGAGATGGGAGCCAGGCAGTGTTGATGCAGGCCTTT  998

seq1  AGTCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCCGAGTTCGAGGCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCCGAGTTCGAGGCC  1048

seq1  AGCCTGGTATACAAAGTGAATTC  1072
      |||||||||||||||||||||||
seq2  AGCCTGGTATACAAAGTGAATTC  1071