BAC Information

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BAC

Clone NameB6Ng01-091I13
Chromosome4 (Build37)
Map Location 120,703,135 - 120,842,524
singlet/doubletdoublet
Overlap geneCol9a2, Zmpste24, Tmco2, LOC100042174, Rlf
Upstream geneHivep3, Edn2, Foxo6, Scmh1, Slfnl1, Ctps, EG667063, Cited4, Kcnq4, Nfyc, Rims3, LOC626489, 3110037I16Rik, Zfp69, Smap1l
Downstream geneOTTMUSG00000008911, EG666914, LOC666921, LOC666927, LOC666931, LOC666937
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091I13.bB6Ng01-091I13.g
ACCDH903531DH903532
length1,116134
definitionDH903531|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I13, 5' end.DH903532|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,841,390 - 120,842,524)(120,703,135 - 120,703,268)
sequence
gaattcttacttctacaccgagacatctttctttgtttataattgtgcat
gtgtgcacacaggtgtatacatatgagatgtatttttgtgagcatgcatt
catggcactcctgtggatgccagaggatacgtttggatgttaattctctc
ttttacctggtttccagggagctcaggtcaccaggattgttggcaggtgt
cttccctgctgagccagctgcaagctgaagtttctaactaaatgtaggca
cctcaaagatcgagttctctactatatagtagtttctaaatttaactttt
cccctgtatcctgctctctttttgcttcattctctgtactgtatggactt
gaccagcaccagtcaggacctgtgccttccccagcctgcctcatcctcat
cgtattcccctgcctctctactcagttacatcggatggcatttgctcctc
tggtcctctgttattcgtgtccttaattgtatctctgactacctcaaatc
tttatctgctctgttgtatttaccaattaattcatctttaaatcagttgc
actatatgcatttctttagtctacttaccacccaccttcataggaaatct
ctgaaacctgcgcttctccctgttgtcctgtagaaacttaggtactttgt
tcctgaatgtctgctcacctcctttactctgtgtatgtgcacctcttgtt
attggaggcagacagttcctcttcttcactcgtataacagatgtctctca
ttcactctttgctgtcctagagatagctgagagtccttcactctgttaga
aatctttagcaccttcttcctctacagtgactccagtttcttgtcctggc
ctacactgagttaagtttcagtgtgactttactgtgaaatattttctcct
ctcagaccttcatattccttcttattcgtctctccaccccggtccccact
gagcctgggttggccttgaactcctggtccatcacagtgtacaacaccat
cctcagtttatttagtactggttgaaatcagggcaggcttctatatgcct
gcaacatctaacaactgagctatatccaggactacctccgttcctcaact
tgtgactctccgctac
cagatgaaatgtgttaggtttcactgggaagtcatgggggggggttaatg
tgaatccacagcactaataacctaagcatcgccactggagtacaagcaag
catttccagaaggaaggatggggaggggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_120841390_120842524
seq2: B6Ng01-091I13.b_46_1161 (reverse)

seq1  GTAGCAGGAGAGTCACAAGTTGAAGGGAACGGGAGGTAGTACCTGGGAAT  50
      ||||| |||||||||||||||||  ||||| ||||||||| |||||  ||
seq2  GTAGC-GGAGAGTCACAAGTTGA--GGAAC-GGAGGTAGT-CCTGG--AT  43

seq1  ATAGCTCAGTTGGTAGGATGTTTGCCAGGCATATATGAAGCCCTGCCCTT  100
      |||||||||||| || ||||||   |||||||||| |||| ||||||| |
seq2  ATAGCTCAGTTGTTA-GATGTT--GCAGGCATATA-GAAG-CCTGCCC-T  87

seq1  GATTTCCACCAGTACTAAATAAAACTGAGATTGGTGTTGTACACCTGTGA  150
      |||||| ||||||||||||| ||||||||  |||||||||||| ||||||
seq2  GATTTCAACCAGTACTAAAT-AAACTGAGGATGGTGTTGTACA-CTGTGA  135

seq1  TGGACCAGGAGTTCAAGGCCAACCCAGGCTCAGTTGGGGACCGGGGTGGA  200
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGACCAGGAGTTCAAGGCCAACCCAGGCTCAG-TGGGGACCGGGGTGGA  184

seq1  GAGAACGAATAAGAAGGAATATGAAGGTCCTGAGAGGAGAAAAATATTTC  250
      ||| |||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GAG-ACGAATAAGAAGGAATATGAAGGT-CTGAGAGGAG-AAAATATTTC  231

seq1  ACAGTAAAGTCACACTGAAACTTAACTCAGTGTAGGCCAGGACAAGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAGTCACACTGAAACTTAACTCAGTGTAGGCCAGGACAAGAAAC  281

seq1  TGGAGTCACTGTAGAGGAAGAAGGTGCTAAAGATTTCTAACAGAGTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCACTGTAGAGGAAGAAGGTGCTAAAGATTTCTAACAGAGTGAAG  331

seq1  GACTCTCAGCTATCTCTAGGACAGCAAAGAGTGAATGAGAGACATCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCAGCTATCTCTAGGACAGCAAAGAGTGAATGAGAGACATCTGTT  381

seq1  ATACGAGTGAAGAAGAGGAACTGTCTGCCTCCAATAACAAGAGGTGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGAGTGAAGAAGAGGAACTGTCTGCCTCCAATAACAAGAGGTGCACA  431

seq1  TACACAGAGTAAAGGAGGTGAGCAGACATTCAGGAACAAAGTACCTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGTAAAGGAGGTGAGCAGACATTCAGGAACAAAGTACCTAAGT  481

seq1  TTCTACAGGACAACAGGGAGAAGCGCAGGTTTCAGAGATTTCCTATGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGGACAACAGGGAGAAGCGCAGGTTTCAGAGATTTCCTATGAAG  531

seq1  GTGGGTGGTAAGTAGACTAAAGAAATGCATATAGTGCAACTGATTTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGTAAGTAGACTAAAGAAATGCATATAGTGCAACTGATTTAAAG  581

seq1  ATGAATTAATTGGTAAATACAACAGAGCAGATAAAGATTTGAGGTAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTAATTGGTAAATACAACAGAGCAGATAAAGATTTGAGGTAGTCA  631

seq1  GAGATACAATTAAGGACACGAATAACAGAGGACCAGAGGAGCAAATGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAATTAAGGACACGAATAACAGAGGACCAGAGGAGCAAATGCCA  681

seq1  TCCGATGTAACTGAGTAGAGAGGCAGGGGAATACGATGAGGATGAGGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATGTAACTGAGTAGAGAGGCAGGGGAATACGATGAGGATGAGGCAG  731

seq1  GCTGGGGAAGGCACAGGTCCTGACTGGTGCTGGTCAAGTCCATACAGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAAGGCACAGGTCCTGACTGGTGCTGGTCAAGTCCATACAGTAC  781

seq1  AGAGAATGAAGCAAAAAGAGAGCAGGATACAGGGGAAAAGTTAAATTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGAAGCAAAAAGAGAGCAGGATACAGGGGAAAAGTTAAATTTAG  831

seq1  AAACTACTATATAGTAGAGAACTCGATCTTTGAGGTGCCTACATTTAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTATATAGTAGAGAACTCGATCTTTGAGGTGCCTACATTTAGTT  881

seq1  AGAAACTTCAGCTTGCAGCTGGCTCAGCAGGGAAGACACCTGCCAACAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTCAGCTTGCAGCTGGCTCAGCAGGGAAGACACCTGCCAACAAT  931

seq1  CCTGGTGACCTGAGCTCCCTGGAAACCAGGTAAAAGAGAGAATTAACATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGACCTGAGCTCCCTGGAAACCAGGTAAAAGAGAGAATTAACATC  981

seq1  CAAACGTATCCTCTGGCATCCACAGGAGTGCCATGAATGCATGCTCACAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTATCCTCTGGCATCCACAGGAGTGCCATGAATGCATGCTCACAA  1031

seq1  AAATACATCTCATATGTATACACCTGTGTGCACACATGCACAATTATAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATCTCATATGTATACACCTGTGTGCACACATGCACAATTATAAA  1081

seq1  CAAAGAAAGATGTCTCGGTGTAGAAGTAAGAATTC  1135
      |||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAGATGTCTCGGTGTAGAAGTAAGAATTC  1116

seq1: chr4_120703135_120703268
seq2: B6Ng01-091I13.g_75_208

seq1  CAGATGAAATGTGTTAGGTTTCACTGGGAAGTCATGGGGGGGGGTTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAAATGTGTTAGGTTTCACTGGGAAGTCATGGGGGGGGGTTAATG  50

seq1  TGAATCCACAGCACTAATAACCTAAGCATCGCCACTGGAGTACAAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCACAGCACTAATAACCTAAGCATCGCCACTGGAGTACAAGCAAG  100

seq1  CATTTCCAGAAGGAAGGATGGGGAGGGGTGGGGG  134
      ||||||||||||||||||||||||||||||||||
seq2  CATTTCCAGAAGGAAGGATGGGGAGGGGTGGGGG  134