BAC Information

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BAC

Clone NameB6Ng01-091K14
Chromosome4 (Build37)
Map Location 64,079,247 - 64,194,647
singlet/doubletdoublet
Overlap genenone
Upstream geneWhrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091K14.bB6Ng01-091K14.g
ACCDH903626DH903627
length2721,079
definitionDH903626|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K14, 5' end.DH903627|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,079,247 - 64,079,518)(64,193,559 - 64,194,647)
sequence
ttatatacttttcagctcttgtttggtgcatacacactttaaatacaatg
tctgattggtagtttgatgcttttcttcctgaaataatcccatctagggt
acctactttatttcacattaataaaaaaaaaaccactatctcaaggcaaa
agtgatgaaggagggaatccaaagtcatgctttggcctccacttatgaat
gagcacaggtatgcaacagcctatttatagacacatagacctacagagag
agaggtgggaggggaggggttg
gaattcactgtcctctttgaaagaacaaggagcaaaagccaggtaggatg
gcgggcttctgaaagcacaactatatatctccaaagcatactaaccattt
ccaactcacaccagagcaaagaggatcttgtctgtagaagggcatttgct
ggggaatttaaggaaggtaaccaaggctccagagtccacggtgaaagttt
aagaagaatttatacaagtatatgatttcccaaatctaggatttatgtgc
agatttatgtctgtggacatagaaagtatttttttggttgtttttttttt
gtttttgtttttcacatggcaaaagctaaatcaaatgaaagctagaatct
catcaccatctagtgggtgtctggggctagtgcatacactgtgggagaca
aacggagcgtctgattaagaaagcaagcttttggcttttatacaggggtt
gctaaggccacagcacccagctgaaggaactgtcctttcgctgtctggta
gtcagcaggggtcatgtagcctatcagggctgaagagacagggaggagac
acaagatcaagaaaacatttatttcccttggccaaactgttttatttttt
gttgttgtttttgttgttttttaattagatattttcttcatttacatttc
aaatgttatccccaaagtcccctatacccgccccccccccgcccccactg
tgctcctctacccacccactcccgcttcctggccctggcattcccctgta
ttggggcatatgatctttgtaagaccaaggacctctcctcccattgatgg
ccgactaggccatcctctgttacatatgcaactagagacacaattctgtg
gggtactggttagttcacattgttgatcctcctatagggttgccacccct
ttagctccttgggtactttctctagctccttctttagggccctgtgttcc
atccatagatgactgtgacatccacttctgtattgccaggcactgcatag
cctcacaagagagagcttattcaggttctgtcagcaatcttgttgcatat
gcatatgggtctgggtttaagtgttgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64079247_64079518
seq2: B6Ng01-091K14.b_55_326

seq1  TTATATACTTTTCAGCTCTTGTTTGGTGCATACACACTTTAAATACAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACTTTTCAGCTCTTGTTTGGTGCATACACACTTTAAATACAATG  50

seq1  TCTGATTGGTAGTTTGATGCTTTTCTTCCTGAAATAATCCCATCTAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTGGTAGTTTGATGCTTTTCTTCCTGAAATAATCCCATCTAGGGT  100

seq1  ACCTACTTTATTTCACATTAATAAAAAAAAAACCACTATCTCAAGGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTTATTTCACATTAATAAAAAAAAAACCACTATCTCAAGGCAAA  150

seq1  AGTGATGAAGGAGGGAATCCAAAGTCATGCTTTGGCCTCCACTTATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGAAGGAGGGAATCCAAAGTCATGCTTTGGCCTCCACTTATGAAT  200

seq1  GAGCACAGGTATGCAACAGCCTATTTATAGACACATAGACCTACAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGGTATGCAACAGCCTATTTATAGACACATAGACCTACAGAGAG  250

seq1  AGAGGTGGGAGGGGAGGGGTTG  272
      ||||||||||||||||||||||
seq2  AGAGGTGGGAGGGGAGGGGTTG  272

seq1: chr4_64193559_64194647
seq2: B6Ng01-091K14.g_68_1146 (reverse)

seq1  ATACAACCACTAAACCCAGACACTATTGCATATGCCAACAAGATTTTGCT  50
      |||||||   ||||||||||| |   |||||||| ||||||||  |||||
seq2  ATACAACACTTAAACCCAGACCCATATGCATATG-CAACAAGA--TTGCT  47

seq1  GACAGGACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTGCCTGGC  100
      |||| || |||||   |||||||||||||||||||||| |||||||||||
seq2  GACA-GAACCTGAATAAGCTCTCTCTTGTGAGGCTATG-CAGTGCCTGGC  95

seq1  AAATACAGAAGTGGATGTTCACAGTCATCTATTGGATGGAACACAGGGCC  150
       |||||||||||||||| ||||||||||||| |||||||||||||||| |
seq2  -AATACAGAAGTGGATG-TCACAGTCATCTA-TGGATGGAACACAGGG-C  141

seq1  CCTAAAGAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTTGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCTAAAGAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGG-TGGCAA  190

seq1  CCCTATAGGAGGATCAACAATGTGAACTAACCAGTACCCCACAGAATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAGGAGGATCAACAATGTGAACTAACCAGTACCCCACAGAATTGT  240

seq1  GTCTCTAGTTGCATATGTAACAGAGGATGGCCTAGTCGGCCATCAATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGTTGCATATGTAACAGAGGATGGCCTAGTCGGCCATCAATGGG  290

seq1  AGGAGAGGTCCTTGGTCTTACAAAGATCATATGCCCCAATACAGGGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGTCCTTGGTCTTACAAAGATCATATGCCCCAATACAGGGGAAT  340

seq1  GCCAGGGCCAGGAAGCGGGAGTGGGTGGGTAGAGGAGCACAGTGGGGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCCAGGAAGCGGGAGTGGGTGGGTAGAGGAGCACAGTGGGGGCG  390

seq1  GGGGGGGGGCGGGTATAGGGGACTTTGGGGATAACATTTGAAATGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGCGGGTATAGGGGACTTTGGGGATAACATTTGAAATGTAAAT  440

seq1  GAAGAAAATATCTAATTAAAAAACAACAAAAACAACAACAAAAAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATATCTAATTAAAAAACAACAAAAACAACAACAAAAAATAAAA  490

seq1  CAGTTTGGCCAAGGGAAATAAATGTTTTCTTGATCTTGTGTCTCCTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGGCCAAGGGAAATAAATGTTTTCTTGATCTTGTGTCTCCTCCCT  540

seq1  GTCTCTTCAGCCCTGATAGGCTACATGACCCCTGCTGACTACCAGACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTCAGCCCTGATAGGCTACATGACCCCTGCTGACTACCAGACAGC  590

seq1  GAAAGGACAGTTCCTTCAGCTGGGTGCTGTGGCCTTAGCAACCCCTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACAGTTCCTTCAGCTGGGTGCTGTGGCCTTAGCAACCCCTGTAT  640

seq1  AAAAGCCAAAAGCTTGCTTTCTTAATCAGACGCTCCGTTTGTCTCCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCAAAAGCTTGCTTTCTTAATCAGACGCTCCGTTTGTCTCCCACA  690

seq1  GTGTATGCACTAGCCCCAGACACCCACTAGATGGTGATGAGATTCTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGCACTAGCCCCAGACACCCACTAGATGGTGATGAGATTCTAGCT  740

seq1  TTCATTTGATTTAGCTTTTGCCATGTGAAAAACAAAAACAAAAAAAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGATTTAGCTTTTGCCATGTGAAAAACAAAAACAAAAAAAAAAC  790

seq1  AACCAAAAAAATACTTTCTATGTCCACAGACATAAATCTGCACATAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAAATACTTTCTATGTCCACAGACATAAATCTGCACATAAATC  840

seq1  CTAGATTTGGGAAATCATATACTTGTATAAATTCTTCTTAAACTTTCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTGGGAAATCATATACTTGTATAAATTCTTCTTAAACTTTCACC  890

seq1  GTGGACTCTGGAGCCTTGGTTACCTTCCTTAAATTCCCCAGCAAATGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACTCTGGAGCCTTGGTTACCTTCCTTAAATTCCCCAGCAAATGCCC  940

seq1  TTCTACAGACAAGATCCTCTTTGCTCTGGTGTGAGTTGGAAATGGTTAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGACAAGATCCTCTTTGCTCTGGTGTGAGTTGGAAATGGTTAGT  990

seq1  ATGCTTTGGAGATATATAGTTGTGCTTTCAGAAGCCCGCCATCCTACCTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGGAGATATATAGTTGTGCTTTCAGAAGCCCGCCATCCTACCTG  1040

seq1  GCTTTTGCTCCTTGTTCTTTCAAAGAGGACAGTGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGCTCCTTGTTCTTTCAAAGAGGACAGTGAATTC  1079