BAC Information

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BAC

Clone NameB6Ng01-093A07
Chromosome4 (Build37)
Map Location 20,042,619 - 20,215,150
singlet/doubletdoublet
Overlap geneE130310K16Rik
Upstream geneLOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093A07.bB6Ng01-093A07.g
ACCDH904623DH904624
length4371,094
definitionDH904623|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A07, 5' end.DH904624|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,042,619 - 20,043,055)(20,214,039 - 20,215,150)
sequence
gaattcactacaataactttgattactgggatctgattttaatatgaggc
tgcaggtgctcttcataaactattttgtaaaagtacaggcagtgaatatg
atttgtggttagaatttaagatgccagaaagaaaatagaatgattgcctt
tgagcaagggggctcatggaagacgaaactgtaagaagcagtctgaaagt
ggctttaagcaagttatcagcatattcacttccctaggacctgtcattga
aagtaagctctctgtgatctagctggtaaatgtagtatgcaggttgttca
gagcatacaaaattgtgtttaagctgcaagtgaagaaagcagacacagag
agaccaagctgatcaagcacaaccatctgtcctgggatctgatgccttct
tccggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctattaagatggaaaaacacatagctcttctatattaatcaggat
gaactgtaagagattaaatctgatgatcaggaagtggggcagtcagtgtg
catctctgcagtttgcctgcaggtaaattgctttgcattaaactaaattc
accaatgaaagcaattatttttctgtaatattttaccctcggagagctgg
aaatgattcatgtagcaaatcaacagaccctaaaaatgaagcaaaatgtt
ttattgtcaataaagcattattgctgtaaaggtaattgaatagcaaacca
actagcaaaaaaaaatgtaaaatgttttattattggtataatttcaggca
tgctcataaagttcccttcaatttcttaaactgagggaaaaaatataact
atatagagagtagctttgccctggaatatgctctgggtatttttgtggcc
tcctgcctcactgtatgcacgaaagtatatgggatatacttgtttttctg
cattttttcagagtggtgacattcaaaatggtgacattcaatctcaccca
tttacaacttcaaaggctttctcttttccatcagcttctttatgcttgca
gagtccaaaccattacttttataaactattaaaattatgtccacagacag
gactgaaagtagtcaaagaagcagatatcaggatgctcagttgaccaaca
gcctctagtctctcagcaaaggccatctatggagctgctccagcaagtgt
ctggcctgaatgacaacatgccctgtttacaggaagctgtgaacccaaga
gaacctgaccctgttcgtcctcccccagcttcccacctatgcagtactct
agcctgggcttgatccacccccaaagatgcttaactgtcagtgcctcgct
tgcgagccaccagactggcctgcattactagttcttcctcctctattcac
atggacattgaaatcttatttattttatgtctgattagatttctatgctg
ggacaaagaccataaccaaaagcaactttagggagaattgatttactttg
tttactattgtaagcaatagtgggactcaagccaaactgggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_20042619_20043055
seq2: B6Ng01-093A07.b_30_466

seq1  GAATTCACTACAATAACTTTGATTACTGGGATCTGATTTTAATATGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACAATAACTTTGATTACTGGGATCTGATTTTAATATGAGGC  50

seq1  TGCAGGTGCTCTTCATAAACTATTTTGTAAAAGTACAGGCAGTGAATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGCTCTTCATAAACTATTTTGTAAAAGTACAGGCAGTGAATATG  100

seq1  ATTTGTGGTTAGAATTTAAGATGCCAGAAAGAAAATAGAATGATTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGGTTAGAATTTAAGATGCCAGAAAGAAAATAGAATGATTGCCTT  150

seq1  TGAGCAAGGGGGCTCATGGAAGACGAAACTGTAAGAAGCAGTCTGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGGGGGCTCATGGAAGACGAAACTGTAAGAAGCAGTCTGAAAGT  200

seq1  GGCTTTAAGCAAGTTATCAGCATATTCACTTCCCTAGGACCTGTCATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAAGCAAGTTATCAGCATATTCACTTCCCTAGGACCTGTCATTGA  250

seq1  AAGTAAGCTCTCTGTGATCTAGCTGGTAAATGTAGTATGCAGGTTGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGCTCTCTGTGATCTAGCTGGTAAATGTAGTATGCAGGTTGTTCA  300

seq1  GAGCATACAAAATTGTGTTTAAGCTGCAAGTGAAGAAAGCAGACACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATACAAAATTGTGTTTAAGCTGCAAGTGAAGAAAGCAGACACAGAG  350

seq1  AGACCAAGCTGATCAAGCACAACCATCTGTCCTGGGATCTGATGCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGCTGATCAAGCACAACCATCTGTCCTGGGATCTGATGCCTTCT  400

seq1  TCCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  437
      |||||||||||||||||||||||||||||||||||||
seq2  TCCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  437

seq1: chr4_20214039_20215150
seq2: B6Ng01-093A07.g_69_1162 (reverse)

seq1  GCCCCCAGCTTTGTGCCTTGAGTTCCCACCCTATTTGCTTTACAAATTGT  50
      ||||||||   | || |||||| |||||  ||| |||| |||| ||| ||
seq2  GCCCCCAG---TTTGGCTTGAG-TCCCA--CTA-TTGC-TTAC-AATAGT  41

seq1  AAACTAAGTAAATCCATTTCTCCCCTAAGTTGCTTTTTGGTTATGGTCTT  100
      |||| |||||||| || |||||||  ||||||| ||||||||||||||||
seq2  AAACAAAGTAAAT-CAATTCTCCCTAAAGTTGC-TTTTGGTTATGGTCTT  89

seq1  TGTCACAGCAATAGAAATCTAATCAGGACATAAAATAAATAAGGATTTCA  150
      |||| |||| ||||||||||||||| |||||||||||||||| |||||||
seq2  TGTCCCAGC-ATAGAAATCTAATCA-GACATAAAATAAATAA-GATTTCA  136

seq1  ATTGTCCATGTGAAATAGAGGAGGAAGAACTAGTAATGCAGGCCAGTCTG  200
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  A-TGTCCATGTG-AATAGAGGAGGAAGAACTAGTAATGCAGGCCAGTCTG  184

seq1  GTGGCTCGCAAGCCGAGGCACTGAACAGTTAAGCATCTTTGGGGGTGGAT  250
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  GTGGCTCGCAAG-CGAGGCACTG-ACAGTTAAGCATCTTTGGGGGTGGAT  232

seq1  CAAGCCCAGGCTAGAGTACTGCATAGGTGGGAAGCTGGGGGAGGACGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCAGGCTAGAGTACTGCATAGGTGGGAAGCTGGGGGAGGACGAAC  282

seq1  AGGGTCAGGTTCTCTTGGGTTCACAGCTTCCTGTAAACAGGGCATGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAGGTTCTCTTGGGTTCACAGCTTCCTGTAAACAGGGCATGTTGT  332

seq1  CATTCAGGCCAGACACTTGCTGGAGCAGCTCCATAGATGGCCTTTGCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGGCCAGACACTTGCTGGAGCAGCTCCATAGATGGCCTTTGCTGA  382

seq1  GAGACTAGAGGCTGTTGGTCAACTGAGCATCCTGATATCTGCTTCTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGAGGCTGTTGGTCAACTGAGCATCCTGATATCTGCTTCTTTGA  432

seq1  CTACTTTCAGTCCTGTCTGTGGACATAATTTTAATAGTTTATAAAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCAGTCCTGTCTGTGGACATAATTTTAATAGTTTATAAAAGTAA  482

seq1  TGGTTTGGACTCTGCAAGCATAAAGAAGCTGATGGAAAAGAGAAAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGACTCTGCAAGCATAAAGAAGCTGATGGAAAAGAGAAAGCCTT  532

seq1  TGAAGTTGTAAATGGGTGAGATTGAATGTCACCATTTTGAATGTCACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTGTAAATGGGTGAGATTGAATGTCACCATTTTGAATGTCACCAC  582

seq1  TCTGAAAAAATGCAGAAAAACAAGTATATCCCATATACTTTCGTGCATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAAATGCAGAAAAACAAGTATATCCCATATACTTTCGTGCATAC  632

seq1  AGTGAGGCAGGAGGCCACAAAAATACCCAGAGCATATTCCAGGGCAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGCAGGAGGCCACAAAAATACCCAGAGCATATTCCAGGGCAAAGC  682

seq1  TACTCTCTATATAGTTATATTTTTTCCCTCAGTTTAAGAAATTGAAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTATATAGTTATATTTTTTCCCTCAGTTTAAGAAATTGAAGGGA  732

seq1  ACTTTATGAGCATGCCTGAAATTATACCAATAATAAAACATTTTACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGAGCATGCCTGAAATTATACCAATAATAAAACATTTTACATTT  782

seq1  TTTTTTGCTAGTTGGTTTGCTATTCAATTACCTTTACAGCAATAATGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCTAGTTGGTTTGCTATTCAATTACCTTTACAGCAATAATGCTT  832

seq1  TATTGACAATAAAACATTTTGCTTCATTTTTAGGGTCTGTTGATTTGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACAATAAAACATTTTGCTTCATTTTTAGGGTCTGTTGATTTGCTA  882

seq1  CATGAATCATTTCCAGCTCTCCGAGGGTAAAATATTACAGAAAAATAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATCATTTCCAGCTCTCCGAGGGTAAAATATTACAGAAAAATAATT  932

seq1  GCTTTCATTGGTGAATTTAGTTTAATGCAAAGCAATTTACCTGCAGGCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATTGGTGAATTTAGTTTAATGCAAAGCAATTTACCTGCAGGCAA  982

seq1  ACTGCAGAGATGCACACTGACTGCCCCACTTCCTGATCATCAGATTTAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGAGATGCACACTGACTGCCCCACTTCCTGATCATCAGATTTAAT  1032

seq1  CTCTTACAGTTCATCCTGATTAATATAGAAGAGCTATGTGTTTTTCCATC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAGTTCATCCTGATTAATATAGAAGAGCTATGTGTTTTTCCATC  1082

seq1  TTAATAGAATTC  1112
      ||||||||||||
seq2  TTAATAGAATTC  1094