BAC Information

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BAC

Clone NameB6Ng01-093M10
Chromosome4 (Build37)
Map Location 146,897,658 - 146,898,827
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671
Downstream geneLOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093M10.bB6Ng01-093M10.g
ACCDH905166DH905167
length1,0871,097
definitionDH905166|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M10, 5' end.DH905167|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtctcaaaaaaccaaaaaaagaagaaaaaaaaaaaagaacct
gaaaacaaaatgcagtaaggcaaataaaaataatacagagagaaattata
agtcttggacaaaattaacatgatgttaggtcaaggcacaatattattta
ctacttgaaggatcaggcactaaagaggaactcctttggaaaattgtcta
gatttttgtcaaaaaaaagaaaaagaaaaggaaagaaaagaaatgaaaag
aaagtatgaaggaaagaaactagaacaaaattacaatgcatactgcacag
tttgttcataaatggtttcctgattgttcactgtaacactctatgtacac
ccatgcatgtcagcataagctggggaaagaagactcgagatttacccagg
tctcattagactattgctaggaagtcaactctttttatgattataatgag
ttccaggattctcatgataatctgtttaaaaatctgttgtaatgattatg
agaggttaaaatggattctagcaaagcatggaggtgagagctcagaagca
caagtccagacttgggggtctgtctttaaagaacagggttctgtgctcat
ggacacctttcaaatggcaggactacttgtttcccattgtggtgactttt
agttttcccatattgtatttgtgcaaaaaaaaatgttacaagttaattga
tccttcatatgtgaatagattaaataaacatactgctgatttataatgca
tctgagttaaggaaagaaattaaagcctttctctcagagcatttaactaa
gtgtgagtgcaaagttgaattctctacttcatgttccctgtgccttctat
cctttgtgtgtctgttcagttagtttaatctttaacttcctgaggctgcc
tcatgcatctctcctttctatctgtcttttgtctccatgtgtaaggtaga
aaatttagtttgactccctagaccaagttggagccaagaaagaaaatagt
gtccttgaagcacctgttcgagaatgctgatccagaacagtaattaccaa
gcagttcatgatctgttctagacttgctgacccaaag
gaattctctgtttaggtattgtactggctagttttgtgtcaacttgacac
aactggagttatcacagagaaaggagcttcagttgaggaaatttctccat
gagatccaactgtaaggcattttctcaattagtgatcaagggggaaaggc
ccttgtgggtgggaccatctcagggctggtagtcttggttctataagaaa
gcaggctgagcaagccaggggaggcaagccagtacagaacatccctccat
ggcctctgcatcagctcctgctccctgacctgcttgagttccagtcctga
cttcctttggtgatgaacagcagtatggaagtgtaagccaaataaaccct
ttcctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaac
cctgactaagacaaattggtaccagcagagtggggtattcctgtgacaac
ctgaccatgttttggggaggactgtggaaggactttggaactttgggctt
gaagatccatccgttgttaagagctctgtcggatgttgtgtaggagcttg
gaagatactgttgagaacactgcagaagatggaggtctggtttgtgaaat
ttcagagggaaaattaaagactcttttcagggccattgctgtttttgaat
gtgaagattctgtagttctggttagctggggctgaagaatcagttgtgat
taacaagataccagaactactaaagcaaaaactttgcatactgggactat
tgatgctggttagctggagctaagaaattagtggtgattaagaagagacc
agcatcattgaggtgacatctttctggggaagtgttttctgaaagcacaa
agaggctgtgttccagagatggccaaggttgtactcctgctgcagcggga
cttagtaatatggtaagggtcacccagtggtactggttttgaagcatgaa
ggggtcacgcaaagcagctgagctcggcactgtgagaggccatggaagcc
atttgttgaaagttgcagcctcattgccattgaagcccaaggtggaaagg
ggtcatgccagtgttttggagaattccagtatccttgagatgacacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146897658_146898827
seq2: B6Ng01-093M10.b_45_1131 (reverse)

seq1  CTTTGGGTCACAATTTCCTCTTCTGGCCTGCATGGATTCTCCACAGGTAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGGTTCTCAAGATTTTAATCTAACTTTTGTGGTCAGCCAGGTCCTAGA  100
                                 |||| ||||||| ||   |||||
seq2  --------------------------CTTTG-GGTCAGCAAG--TCTAGA  21

seq1  ACAGGATCACTGAACTGGCTTGTGTAATTACCTGTTCTGTGATCAGCCAT  150
      ||| ||||| |||||| ||||| ||||||| |||||||| |||||| |||
seq2  ACA-GATCA-TGAACT-GCTTG-GTAATTA-CTGTTCTG-GATCAG-CAT  64

seq1  TCTCCGAACAGGGTGCTTCAGGGACCACCTATTTTTCGTTCTTGGCTTCA  200
      ||| |||||| ||||||||| ||||   ||| ||||| ||||||||| ||
seq2  TCT-CGAACA-GGTGCTTCAAGGAC--ACTA-TTTTCTTTCTTGGCTCCA  109

seq1  ACTTGGTCTAGGGGGTCAAACTTAAATTTTCTACCTTACACATGGAGACA  250
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  ACTTGGTCTAGGGAGTCAAAC-TAAATTTTCTACCTTACACATGGAGACA  158

seq1  AAAGACAGATAGAAACGGAGAATTGCATGAGGCAGCCTTCAGGAAGTTAA  300
      ||||||||||||||| |||||  |||||||||||||| ||||||||||||
seq2  AAAGACAGATAGAAA-GGAGAGATGCATGAGGCAGCC-TCAGGAAGTTAA  206

seq1  AGATTTAAACTAACTGAACAGACACACAAAGGATAGAAGGCACAGGGAAC  350
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGA-TTAAACTAACTGAACAGACACACAAAGGATAGAAGGCACAGGGAAC  255

seq1  ATGAAGTAGAGAATTCAACTTTGGACTCACACTTAGTTAAATGCTCTGAG  400
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGAAGTAGAGAATTCAACTTTGCACTCACACTTAGTTAAATGCTCTGAG  305

seq1  GGAAAGGCTTTAATTTCTTTCCTTAACTCAGATGGATTATAAATCAGCAG  450
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGAAAGGCTTTAATTTCTTTCCTTAACTCAGATGCATTATAAATCAGCAG  355

seq1  TATGTTTATTTCATCTATTCACATATGAAGGATCAATTAACTTGTAACAT  500
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  TATGTTTATTTAATCTATTCACATATGAAGGATCAATTAACTTGTAACA-  404

seq1  TTTTTTTTTGCACAAATACAATATGGGAAAACTAAAAGTCACCACAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGCACAAATACAATATGGGAAAACTAAAAGTCACCACAATGG  454

seq1  GAAACAAGTAGCCCTGACATTTGAAAGGTGTCCATGAGCACAGAACCCTG  600
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  GAAACAAGTAGTCCTGCCATTTGAAAGGTGTCCATGAGCACAGAACCCTG  504

seq1  TTCTTTAAAGACAGACCTCCAGGTCTGGACTTGTGCTTCTGAGCTCTCAC  650
      ||||||||||||||||| ||| ||||||||||||||||||||||||||||
seq2  TTCTTTAAAGACAGACCCCCAAGTCTGGACTTGTGCTTCTGAGCTCTCAC  554

seq1  CTCCATGCTTAGCTAGAATCCATTTTAACCTCTCACAATCATTACAACAG  700
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  CTCCATGCTTTGCTAGAATCCATTTTAACCTCTCATAATCATTACAACAG  604

seq1  ATTTTTAAACAGATTATAATGAGAATCCTGGAACTCATTATAATCATAAA  750
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTTTTAAACAGATTATCATGAGAATCCTGGAACTCATTATAATCATAAA  654

seq1  AAGAGTTGACTTCCTAGCAATAGTCTAATGAGACCTGGGTAAATCTCGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTGACTTCCTAGCAATAGTCTAATGAGACCTGGGTAAATCTCGAG  704

seq1  TCTTCTTTCCCCAGCTTATGCTGACATGCATGGGTGTACATAGAGTGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTCCCCAGCTTATGCTGACATGCATGGGTGTACATAGAGTGTTA  754

seq1  CAGTGAACAATCAGGAAACCATTTATGAACAAACTGTGCAGTATGCATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAACAATCAGGAAACCATTTATGAACAAACTGTGCAGTATGCATTG  804

seq1  TAATTTTGTTCTAGTTTTCTTTCCTTCATACTTTCTTTTCA-----TTTC  945
      |||||||||||||| ||||||||||||||||||||||||||     ||||
seq2  TAATTTTGTTCTAG-TTTCTTTCCTTCATACTTTCTTTTCATTTCTTTTC  853

seq1  TTTCCTTTTCTTTTTC-TTTTTTTGACAAAAATCTAGACAATTTTCGAAA  994
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  TTTCCTTTTCTTTTTCTTTTTTTTGACAAAAATCTAGACAATTTTCCAAA  903

seq1  GGAGTTTCTCTTTAGTGCCTGATCCTTCAAGTAGTAAATAATATTGTGCC  1044
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCCTCTTTAGTGCCTGATCCTTCAAGTAGTAAATAATATTGTGCC  953

seq1  TTGACCTAACATCATGTTAATTTTGTCCAAGACTTATAATTTCTCTCTGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTAACATCATGTTAATTTTGTCCAAGACTTATAATTTCTCTCTGT  1003

seq1  ATTATTTTTATTTGCCTTACTGCATTTTGTTTTCAGGTTCTTTTTTTTTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTATTTGCCTTACTGCATTTTGTTTTCAGGTTCTTTTTTTTTT  1053

seq1  TTC--------TTGGTTTTTTGAGACAGGGATTC  1170
      |||        |||||||||||||||||| ||||
seq2  TTCTTCTTTTTTTGGTTTTTTGAGACAGGAATTC  1087