BAC Information

Click to search

BAC

Clone NameB6Ng01-094A01
Chromosome4 (Build37)
Map Location 51,807,882 - 51,808,890
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040979, LOC666681, LOC100040814
Downstream geneLOC384015, LOC100041026, LOC100041038, LOC666724, Smc2, LOC100040883, 4930547C10Rik, LOC100040908
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094A01.bB6Ng01-094A01.g
ACCDH905336DH905337
length1,1751,009
definitionDH905336|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A01, 5' end.DH905337|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaagaataccgaatggctgagaagcacctgaaaaaaat
gttcaacatccttaatcaccagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgtcag
tagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactactggaggatcccacaatacctgtcctggc
atatatccagaagatgttccaactggtaagaagggcacatgctccactat
gttcatagcagccttatttataatagccagaagcttgaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatttctaggcaa
atgaatggacctggagggcatcatcttgagtgaggtaactcaatcacaaa
agaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttggaatacccaagatataagatataatttgcaaaacacatgaaactcaa
gaacaaagatcaaagtgtggacactttgcccctacttagaattgggaaca
aaacacccatggaaggagttacagagacaaaatttggagctgagacgaaa
ggatggaccatctagagactgccatacccggggatccatcccataatcag
cctccaaacgctgacaccgttgcatacactagcaagattttgctgaaagg
acccagatatagctgtctcttgtgagactatgctggggcctagcaaacac
agaagtgtttgctcacagacagctattggatgggtcgcaggctcccaatg
aagagctagagaaagtaaccaagagctaaagggatctgcaaccttatatg
tggaacacatatgactaccgttaccccagagcttgtgtcgctcgctgcat
atgtatcagaagaatgctagtcgtcatcatggcaaaggaaggccatgtcg
ggcacctttatatgctcgaacaagggaatgccaagccaagaataggatgt
ggtggggggagacatgtggggggac
gaattccatgtcagacaattgaccaattaaccatatagtttctactctat
gtcctgtagtttaaattaccttgtagaacttagactgcattttgatagca
actgtaaaaaattatgagctttgactacccattcaatgattcccaatgtc
tcaaatttctgtatttctatagcttggattctaatgtgccacctgtagct
gagaatcaaagatattaatttcatgtgtctacactgatgctttattggta
gaaatggcagtttcattgccccagtccaggtagcatcaacagggtctaca
gaaggattcctaagacaccaatactttctaacatttttttgactaaccta
aacagaaagctagttaaaaaaaaaaagatggccaagagtgaatgtagagg
gagtagcatcagtggcctctgtatccactcccaggaaggcagacaggcag
gcaatgtgttggtcttaggattctttagcagacgaacttgtggcataaat
ggatatttaaattaaaccctatgaaatttattggaaatctagaaacattc
tctttggcaaatacagtgcaagagttagttaagagagaagaaaacaatga
gagaaagaaacaatttgttctagagaaaaccctcatgtcttctatcatat
agatggatttttccttttttctttttctttttcaattttttattagatat
tttcttcatttacatttcaaatgctagagacttgagctctgaggttactg
gttagttcatgttgttgtttccacctatagggttgcagacccctttagct
ccttggttacttttctctagctcctccactgggggccctgtgttccatcc
aatagataactgagaatatccacttctgtatttgccaggcactggcctaa
cctcacacgagacagctacatcatggtcctactaaagtgtattgcctgag
ctatttgtgggaaaagaggataggtttgcatttagatatagaaggacctc
tgggtttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_51807882_51808890
seq2: B6Ng01-094A01.g_68_1076

seq1  GAATTCCATGTCAGACAATTGACCAATTAACCATATAGTTTCTACTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTCAGACAATTGACCAATTAACCATATAGTTTCTACTCTAT  50

seq1  GTCCTGTAGTTTAAATTACCTTGTAGAACTTAGACTGCATTTTGATAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTAGTTTAAATTACCTTGTAGAACTTAGACTGCATTTTGATAGCA  100

seq1  ACTGTAAAAAATTATGAGCTTTGACTACCCATTCAATGATTCCCAATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAAAATTATGAGCTTTGACTACCCATTCAATGATTCCCAATGTC  150

seq1  TCAAATTTCTGTATTTCTATAGCTTGGATTCTAATGTGCCACCTGTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTCTGTATTTCTATAGCTTGGATTCTAATGTGCCACCTGTAGCT  200

seq1  GAGAATCAAAGATATTAATTTCATGTGTCTACACTGATGCTTTATTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCAAAGATATTAATTTCATGTGTCTACACTGATGCTTTATTGGTA  250

seq1  GAAATGGCAGTTTCATTGCCCCAGTCCAGGTAGCATCAACAGGGTCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGCAGTTTCATTGCCCCAGTCCAGGTAGCATCAACAGGGTCTACA  300

seq1  GAAGGATTCCTAAGACACCAATACTTTCTAACATTTTTTTGACTAACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATTCCTAAGACACCAATACTTTCTAACATTTTTTTGACTAACCTA  350

seq1  AACAGAAAGCTAGTTAAAAAAAAAAAGATGGCCAAGAGTGAATGTAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGCTAGTTAAAAAAAAAAAGATGGCCAAGAGTGAATGTAGAGG  400

seq1  GAGTAGCATCAGTGGCCTCTGTATCCACTCCCAGGAAGGCAGACAGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCATCAGTGGCCTCTGTATCCACTCCCAGGAAGGCAGACAGGCAG  450

seq1  GCAATGTGTTGGTCTTAGGATTCTTTAGCAGACGAACTTGTGGCATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGTTGGTCTTAGGATTCTTTAGCAGACGAACTTGTGGCATAAAT  500

seq1  GGATATTTAAATTAAACCCTATGAAATTTATTGGAAATCTAGAAACATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTTAAATTAAACCCTATGAAATTTATTGGAAATCTAGAAACATTC  550

seq1  TCTTTGGCAAATACAGTGCAAGAGTTAGTTAAGAGAGAAGAAAACAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCAAATACAGTGCAAGAGTTAGTTAAGAGAGAAGAAAACAATGA  600

seq1  GAGAAAGAAACAATTTGTTCTAGAGAAAACCCTCATGTCTTCTATCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAAACAATTTGTTCTAGAGAAAACCCTCATGTCTTCTATCATAT  650

seq1  AGATGGATTTTTCCTTTTTTCTTTTTCTTTTTCAATTTTTTATTAGATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGATTTTTCCTTTTTTCTTTTTCTTTTTCAATTTTTTATTAGATAT  700

seq1  TTTCTTCATTTACATTTCAAATGCTAGAGACTTGAGCTCTGAGGTTACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCATTTACATTTCAAATGCTAGAGACTTGAGCTCTGAGGTTACTG  750

seq1  GTTAGTTCATGTTGTTG-TTCCACCTATAGGGTTGCAGACCCCTTTAGCT  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTAGTTCATGTTGTTGTTTCCACCTATAGGGTTGCAGACCCCTTTAGCT  800

seq1  CCTTGGTTAC-TTTCTCTAGCTCCTCCACTGGGGGCCCTGTGTTCCATCC  848
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTACTTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGTTCCATCC  850

seq1  AATAGATAACTGAGAATATCCACTTCTGTATTTGCCAGGCACTGGCCTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAACTGAGAATATCCACTTCTGTATTTGCCAGGCACTGGCCTAA  900

seq1  CCTCACACGAGACAGCTACATCATGGTCCTACTAAAGTGTATTGCCTGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACACGAGACAGCTACATCATGGTCCTACTAAAGTGTATTGCCTGAG  950

seq1  CTATTTGTGGGAAAAAGAGGATATGGTTGCATTTAGATTATAGAGTGACC  998
      ||||||||||| ||||||||||| | ||||||||||| ||||||  ||||
seq2  CTATTTGTGGG-AAAAGAGGATAGGTTTGCATTTAGA-TATAGAAGGACC  998

seq1  TCTGTGTTTCT  1009
      |||| ||||||
seq2  TCTGGGTTTCT  1009