BAC Information

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BAC

Clone NameB6Ng01-097G09
Chromosome4 (Build37)
Map Location 14,453,447 - 14,454,649
singlet/doubletsinglet
Overlap geneSlc26a7
Upstream geneRunx1t1, LOC625831, LOC433687, LOC100040030, LOC433688
Downstream gene1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097G09.bB6Ng01-097G09.g
ACCDH907785DH907786
length1,181616
definitionDH907785|Mus musculus domesticus DNA, BAC clone: B6Ng01-097G09, 5' end.DH907786|Mus musculus domesticus DNA, BAC clone: B6Ng01-097G09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatctgaagaaaagaaacacaaaacacaaaatgtttgcttag
aaaggaaacgggaaatcttgagaaaatagatatataaagacgcattcatt
ccttaaacaagtctgaaataaatatctctagagtggatttattttagatg
tgaaacaattttcttgtgccttatccacataaaactggtttaaaataagc
agttttgcaaagctaaacccgtggaagcgaatggagggggttttacctta
aaaaccttctgctttatatgtttttatcatgaggtcatcccagcctgcca
ccctataggctgggacgcagttgttccctttaattcagaagaactagcca
tcatttatctagccatcattttagcccttattgcacacactgtatctctc
ctccctagcctatgatatatttaatcctatgcacaatagagttgcaagtt
tactgtaacttccacttcccattatgattctgagttctacctttcctcgg
tgctgagcctgcctgagtgtagcagaacagtacgtcatcagagtattgag
ccccactcctcccaaccaatctccatacttacagaaggacttggggattt
taggatcttgacacttaaaaacaaaaaacaaatgaacacacagcctagag
gctagaatttattagacagctaagcaattgcagtaccatctggctctata
ttatttaatttaatttttgtgagaatttcagacaaaagcactatatagac
atcagttccgcccctacctcttcccctttcatctgcctatgtcttcctac
tccctctcaaattcatgacctcttcttctttaattatcatgggtttgaca
tatgcacataactagagtctcccaagtctgctaagtgttcatatgtatac
aggtttagggctggtcttggcagccattatttgtacacagatattaatct
aagtgcatcccttatgagatcccctatgttggtatatcgactggtgctga
cgtgtgtacgcttgtttaggcaacatattttttaaagttctggggtgaag
cttctaatatatgaaaacctatctaccgcatgcatctgggcctcctggct
ccgtaatattcatctctccataaacatttttcgaactaagtgtacaaatg
tcgtggaaaattaactgctgtagaccttccc

gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagcccaccttcttgtgttctttatatatatattggatattagtt
ccctatctgacttaggataggtaaagatcctttcccaatctgttggtggt
ctttttgtcttattgacgatgtcttttgccttgcagatgctttgcaattt
tatgaggtcccatttgtagattctcaatctttcagcacaattcattgctc
ttctattcaggaatttttcccctgtacccatatcttcgaggcttttcccc
actttctcccctaaacctgataaacagcttcagtgaagtagctagatata
aaattaactctaacaaatcaatggcatttctctaaaggaaggataaatat
gctgacaaagaaattaggcaaacaacacccttcacaatagtcacaaataa
tataaaataccttggtgtgactctaacaaaggaagtgaaagatctgtatg
ataagaacttcaagtctctgaagatagaatttaaagcagatctcagaaga
tggaaagatctcccatgcttgtggattggcaggatcaatatattaaaaaa
tggctatcttgccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_14453447_14454649
seq2: B6Ng01-097G09.b_47_1227

seq1  GAATTCTTTATCTGAAGAAAAGAAACACAAAACACAAAATGTTTGCTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCTGAAGAAAAGAAACACAAAACACAAAATGTTTGCTTAG  50

seq1  AAAGGAAACGGGAAATCTTGAGAAAATAGATATATAAAGACGCATTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACGGGAAATCTTGAGAAAATAGATATATAAAGACGCATTCATT  100

seq1  CCTTAAACAAGTCTGAAATAAATATCTCTAGAGTGGATTTATTTTAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAACAAGTCTGAAATAAATATCTCTAGAGTGGATTTATTTTAGATG  150

seq1  TGAAACAATTTTCTTGTGCCTTATCCACATAAAACTGGTTTAAAATAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAATTTTCTTGTGCCTTATCCACATAAAACTGGTTTAAAATAAGC  200

seq1  AGTTTTGCAAAGCTAAACCCGTGGAAGCGAATGGAGGGGGTTTTACCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGCAAAGCTAAACCCGTGGAAGCGAATGGAGGGGGTTTTACCTTA  250

seq1  AAAACCTTCTGCTTTATATGTTTTTATCATGAGGTCATCCCAGCCTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTCTGCTTTATATGTTTTTATCATGAGGTCATCCCAGCCTGCCA  300

seq1  CCCTATAGGCTGGGACGCAGTTGTTCCCTTTAATTCAGAAGAACTAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAGGCTGGGACGCAGTTGTTCCCTTTAATTCAGAAGAACTAGCCA  350

seq1  TCATTTATCTAGCCATCATTTTAGCCCTTATTGCACACACTGTATCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATCTAGCCATCATTTTAGCCCTTATTGCACACACTGTATCTCTC  400

seq1  CTCCCTAGCCTATGATATATTTAATCCTATGCACAATAGAGTTGCAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGCCTATGATATATTTAATCCTATGCACAATAGAGTTGCAAGTT  450

seq1  TACTGTAACTTCCACTTCCCATTATGATTCTGAGTTCTACCTTTCCTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAACTTCCACTTCCCATTATGATTCTGAGTTCTACCTTTCCTCGG  500

seq1  TGCTGAGCCTGCCTGAGTGTAGCAGAACAGTACGTCATCAGAGTATTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCCTGCCTGAGTGTAGCAGAACAGTACGTCATCAGAGTATTGAG  550

seq1  CCCCACTCCTCCCAACCAATCTCCATACTTACAGAAGGACTTGGGGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTCCTCCCAACCAATCTCCATACTTACAGAAGGACTTGGGGATTT  600

seq1  TAGGATCTTGACACTTAAAAACAAAAAACAAATGAACACACAGCCTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCTTGACACTTAAAAACAAAAAACAAATGAACACACAGCCTAGAG  650

seq1  GCTAGAATTTATTAGACAGCTAAGCAATTGCAGTACCATCTGGCTCTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATTTATTAGACAGCTAAGCAATTGCAGTACCATCTGGCTCTATA  700

seq1  TTATTTAATTTAATTTTTGTGAGAATTTCAGACAAAAGCACTATATAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAATTTAATTTTTGTGAGAATTTCAGACAAAAGCACTATATAGAC  750

seq1  ATCAGTTCCGCCCCTACCTCTTCCCCTTTCATCTGCCTATGTCTTCCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTCCGCCCCTACCTCTTCCCCTTTCATCTGCCTATGTCTTCCTAC  800

seq1  TCCCTCTCAAATTCATGACCTCTTCTTCTTTAATTATCAT-GGTTTGACA  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCCTCTCAAATTCATGACCTCTTCTTCTTTAATTATCATGGGTTTGACA  850

seq1  TATGCACATAACTAGAGTCTCCCAAGTCTGCTAAGTGTTCATATGTATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACATAACTAGAGTCTCCCAAGTCTGCTAAGTGTTCATATGTATAC  900

seq1  AGGTTTAGGGCTGGTCTTGGCAGCCATTATTTGTACACAGATATTTATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGTTTAGGGCTGGTCTTGGCAGCCATTATTTGTACACAGATATTAATCT  950

seq1  AGGTGCATTCCCTTATGAGAATCCCCTATGTTGGTATATCGACTGGTGCT  999
      | ||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGTGCA-TCCCTTATGAG-ATCCCCTATGTTGGTATATCGACTGGTGCT  998

seq1  GACGTGTGTACGCCTTGTTTAGGCAACCATATTTTTAAAGTTTCATGGGT  1049
      |||||||||||| ||||||||||||| ||||||||| ||  |||  ||||
seq2  GACGTGTGTACG-CTTGTTTAGGCAA-CATATTTTTTAAAGTTCTGGGGT  1046

seq1  GAAGCTTCCTATCATA-ATGAGAACACTATCTACCAGCATGCATTCTGGT  1098
      ||||||||   | ||| |||| ||| ||||||||| ||||||| ||||| 
seq2  GAAGCTTC---TAATATATGAAAAC-CTATCTACC-GCATGCA-TCTGGG  1090

seq1  CCT-CTGGCTCCTGTAATATTTCCATCTTCTCCTATATACTTTTTCCTGA  1147
      ||| |||||||| ||||||||  |||| ||||| ||| || |||| | ||
seq2  CCTCCTGGCTCC-GTAATATT--CATC-TCTCC-ATAAACATTTTTC-GA  1134

seq1  ACCTTAGGTGTACAAGTTGTCTTGTGGATATATTAACTGCTGTTAGGCAC  1197
      ||  || ||||||||  ||||  ||||| | ||||||||||| |||  ||
seq2  AC--TAAGTGTACAA-ATGTC--GTGGA-AAATTAACTGCTG-TAG--AC  1175

seq1  CTTCCC  1203
      ||||||
seq2  CTTCCC  1181


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