BAC Information

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BAC

Clone NameB6Ng01-103D03
Chromosome4 (Build37)
Map Location 86,724,646 - 86,725,804
singlet/doubletsinglet
Overlap geneSlc24a2
Upstream geneAdamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l
Downstream geneMllt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103D03.b
ACCDH911865
length1,167
definitionDH911865|Mus musculus domesticus DNA, BAC clone: B6Ng01-103D03, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccgtgatctcctggctgatataacttctcttgaccaatgatct
ggtttttttccaaaataaaatgctctttaactttctgcaatcaatttatc
ttctactcactctattcagtatttctttctcctggtttcaaatctctttc
tactgccccaaatatttcctgatgatggagatgatctatccagacaaatg
atagaaaggctttgcttctggaccctgagctcctttgataacctttccta
cttgggtcatttcgagcctttctcctatctgatgtctctgtaaagcggag
ctatgacagggatagtccatcattctgggctaccagcttcaggcatgctt
ttttttttcttacttccctgaaggattaacagagattgtgacctgagtac
acagtccaaagtcatctggatgttcatctcttctttctctcactaagcaa
ttgtttaacttcccctctgaggaatatgctagcacctcataataagaggg
attaagagacggtcttctgtttagagggatagggattctttccctccgaa
ttctacatttgagtttttgtacctgttaccttattttcccaataggcttt
gaggcttattcaccttttatctgagaaagataatttaaatgtgtttttat
tgcagaaaagtacattgacagaaaaaaggatacaccatttttttaatgaa
tgtcatttcagtcaagtctcctctcactcaatcctgggatgttaaaattg
attccagttaaatataagatttgtatttaaattactaaaatgtgggtcac
atttatgaccaaaaggaaaaaaaaccctttagtttgtctatatgtccttt
atttacaattctgcctggtcagtacatttcacagggcatgggtagatggt
tttagaaatagaattattgattgttgctgcagcattcagacagcttctgt
gacctctgtcttgtgccagccacttactgggaaagccagctctcgttttc
agacttgtctgttgcattctgaagcttctggggacctcactttggtggtt
taatttgcagtatttcgagccgaagtgaatcgcaggcagttctactggtg
tggccaaagcagctagatatcccaatatttgctttattttcaatgctaag
ttaagaagcagggagca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86724646_86725804
seq2: B6Ng01-103D03.b_56_1208 (reverse)

seq1  TGCTCCCTGC-TCTTTTCCTAGCATGTGAAAATGAGGCAAATATTGTGTA  49
      |||||||||| ||||  | |||||| ||||||| | |||||||||| |  
seq2  TGCTCCCTGCTTCTTAACTTAGCAT-TGAAAATAAAGCAAATATTGGGAT  49

seq1  GTCTAGCTGCTTTGGGCCACA-CAGTGAGACATGCCTGTGGTTCACTCTG  98
       |||||||||||| ||||||| |||| |||  |||||| | ||||||  |
seq2  ATCTAGCTGCTTT-GGCCACACCAGT-AGAACTGCCTGCGATTCACTTCG  97

seq1  GCTCGAAATTACCTGCAAATTATACAACC-AAGTGA-GTCACCATGAAGG  146
      |||||||||   |||||||||| || ||| |||||| ||| ||| ||| |
seq2  GCTCGAAAT--ACTGCAAATTAAACCACCAAAGTGAGGTCCCCA-GAA-G  143

seq1  CTTCAGATGCCAACAGACAAGTCTGGAAAACGAGAGCTGGCTTTCCCAGT  196
      |||||||   |||||||||||||| |||||||||||||||||||||||||
seq2  CTTCAGAATGCAACAGACAAGTCT-GAAAACGAGAGCTGGCTTTCCCAGT  192

seq1  CAGTGGCTGGGCACAGGACAGAGGTACACAGAAGCTGTCTGAATGCTGCA  246
       ||||||| |||||| ||||||||| ||||||||||||||||||||||||
seq2  AAGTGGCT-GGCACAAGACAGAGGT-CACAGAAGCTGTCTGAATGCTGCA  240

seq1  GCAACAATCATTAACTTCTATTTCTAAAACCATCTA-CCATGCCCTGTGA  295
      |||||||||| ||| ||||||||||||||||||||| |||||||||||||
seq2  GCAACAATCAATAA-TTCTATTTCTAAAACCATCTACCCATGCCCTGTGA  289

seq1  AATGTACTGACCAGGCAGAATTGTAAATAAAGGACATATAGACAAACTTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATGTACTGACCAGGCAGAATTGTAAATAAAGGACATATAGACAAAC-TA  338

seq1  AAGGGTTTTTTTTCCTTTTGGTCATAAATGTGACCCACATTTTAGTAATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTTTTTTTCCTTTTGGTCATAAATGTGACCCACATTTTAGTAATT  388

seq1  TAAATACAAATCTTATATTTAACTGGAATCAATTTTAACATCCCAGGATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACAAATCTTATATTTAACTGGAATCAATTTTAACATCCCAGGATT  438

seq1  GAGTGAGAGGAGACTTGACTG-AATGACATTCATTAAAAAAATGGTGTAT  494
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGTGAGAGGAGACTTGACTGAAATGACATTCATTAAAAAAATGGTGTAT  488

seq1  CC-TTTTTCTGTCAATGTACTTTTCTGCAATAAAAACACATTTAAATTAT  543
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTCTGTCAATGTACTTTTCTGCAATAAAAACACATTTAAATTAT  538

seq1  CTTTCTCAGAT-AAAGGTGAATAAGCCTCAAAGCCTATTGGGAAAATAAG  592
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCAGATAAAAGGTGAATAAGCCTCAAAGCCTATTGGGAAAATAAG  588

seq1  GTAACAGGTACAAAAACTCAAATGTAGAATTCGGAGGGAAAGAATCCCTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGGTACAAAAACTCAAATGTAGAATTCGGAGGGAAAGAATCCCTA  638

seq1  TCCCTCTAAACAGAAGACCGTCTCTTAATCCCTCTTATTATGAGGTGCTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTAAACAGAAGACCGTCTCTTAATCCCTCTTATTATGAGGTGCTA  688

seq1  GCATATTCCTCAGAGGGGAAGTTAAACAATTGCTTAGTGAGAGAAAGAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTCCTCAGAGGGGAAGTTAAACAATTGCTTAGTGAGAGAAAGAAG  738

seq1  AGATGAACATCCAGATGACTTTGGACTGTGTACTCAGGTCACAATCTCTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAACATCCAGATGACTTTGGACTGTGTACTCAGGTCACAATCTCTG  788

seq1  TTAATCCTTCAGGGAAGTAAGAAAAAAAAAAGCATGCCTGAAGCTGGTAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTTCAGGGAAGTAAGAAAAAAAAAAGCATGCCTGAAGCTGGTAG  838

seq1  CCCAGAATGATGGACTATCCCTGTCATAGCTCCGCTTTACAGAGACATCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATGATGGACTATCCCTGTCATAGCTCCGCTTTACAGAGACATCA  888

seq1  GATAGGAGAAAGGCTCGAAATGACCCAAGTAGGAAATGTTATCAAAGGAG  942
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATAGGAGAAAGGCTCGAAATGACCCAAGTAGGAAAGGTTATCAAAGGAG  938

seq1  CTCAGGGTCCAGAAGCAAAGCCTTTCTATCATTTGTCTGGATAGATCATC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGTCCAGAAGCAAAGCCTTTCTATCATTTGTCTGGATAGATCATC  988

seq1  TCCATCATCATGAAATATTTGGGGCAGTAGAAAGAGATCTGAAAACAGTA  1042
      |||||||||| ||||||||||||||||||||||||||| ||||| ||| |
seq2  TCCATCATCAGGAAATATTTGGGGCAGTAGAAAGAGATTTGAAACCAGGA  1038

seq1  GAAAGAAATACTGAATAGAGTGAGTAGAAGATAAATTGATTGGAGAAAGT  1092
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAAAGAAATACTGAATAGAGTGAGTAGAAGATAAATTGATTGCAGAAAGT  1088

seq1  TAAAGAGCATTTTATTTTTTTAAAAAAACCAGATCATTGGTCAAGAGAAG  1142
      |||||||||||||| ||||  |||||||||||||||||||||||||||||
seq2  TAAAGAGCATTTTA-TTTTGGAAAAAAACCAGATCATTGGTCAAGAGAAG  1137

seq1  TTATATCAGCTGAGGAG  1159
      ||||||||||  |||||
seq2  TTATATCAGC-CAGGAG  1153