BAC Information

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BAC

Clone NameB6Ng01-104F22
Chromosome4 (Build37)
Map Location 37,850,217 - 37,989,598
singlet/doubletdoublet
Overlap geneLOC277771
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC100039448, LOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104F22.bB6Ng01-104F22.g
ACCDH912691DH912692
length9351,118
definitionDH912691|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F22, 5' end.DH912692|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,989,051 - 37,989,598)(37,850,217 - 37,851,330)
sequence
gaattcccaaaattatatcaatatcattacactgaacaatcaaagtcaaa
taaccttatcccagtaaaagaagtttagtgctttgttttagaatgtgtgg
tttatgagctacagtttcagaaaaagtcattttctatgacttttgcctct
tttggtagcagcagtgatttaccagccctcgaattcccttctactgggtc
atggatcctccaggggaccaagggtctcttctcccattgatacatgacaa
gatcattctctgctataaatgcatctggagtcatgggtctctccatttgt
actccttggttggtggtttgtccctgggagttcataacaaaggtttttaa
attggcaagttgagaggttgcctttatatagtttaagtacatgaaaaagt
ttatgtatgacttcagtagtatgtgcctatttatttttttagtgatggat
ttaaaaattctaagtaacatattgtcacttaattagaggtacagtgatat
gtcagtttatttttacaaataacaaaaattataaatgtcattaattcaac
ccttttggcagttaacaaggctcctatgcatagtcttcaattccctttaa
cagtaaatttactaaatttgattattagtgtagaattttgatgactcagt
cttaattaaatacactacactaattattttaagacataatagaaatacat
aacagttactccttccatgggtgttttgttcccaattctaagaaggggct
cagtgtccatattttggtcttcattcttcttgagtttcatgtgttttgca
aattgtatcttgtatcttgggtattctaagtttctgggctaatatccact
tatcagtgagtacatatcatttgagttcttttgtgattgggttacctcac
tcaggatgatgccctccaggtccaaccatttgcct
gaattcacttccaaaatgtgttttaccaaggaatattgcctttggatttt
cttctgaatctagtcatatcatacaaattactacattatctggccctgaa
agaaattagctagtctacaaaaatttttttttcgtttgattttgtgagac
agggtttctctgtgtagctctggctgtcctggaactcactctgtagatca
ggctggcctcgaactcagaaatctgccttcctctgcctctcaaattaaag
gcatgcaccaccactgcctggctttacaaaatatttttaacttaaatgaa
taggctaatgaacacttgctcatgtgctgagaaggttgctatgaattgtt
aaaagaagtacattctgatcctgacatattgaatctccattcaatcaaca
tttgctaccctcacattttctaatctcctgactctaaatatttttaaggt
atatgtgaaataatataatttacattttacttcaaaatgaagaatacaca
cacacacacataccactgacacagactgttgggaacttgtccaggtgttt
gtctcctatcaatattgtttagcaggaaaagagtaagtctatcatttgaa
ttttgtaaataacattcactgaaaaaaatttcagtaggatgagcttttgt
ttcacaataattcccatgcagcaaagtgaataaaatcagtggcttggtcc
agttataaaatagtaatctgaatttaggatatagaaccagaccatttgaa
tcacattaaggagaaacacactctcccatcccagaatcactcattctgca
gaataaatgctaatgtcaattactgtccttaatctattttttttaattag
tcttcctgcaaagcagatgcattatgagttgggaaactgcagagactaca
gaaaagtttagtttcttcggacagtgaccaatagttgacaacattagact
gttttcagagttggaagaatatgtatgctgaaattacacagtgtaacaaa
agatcaaagttcatatgactttatgttgttatgttgcttctttttttcct
ccttacatttgagtaactgggcccagaaatattggcttcagtaggataaa
ggttgaagatgatcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37989051_37989598
seq2: B6Ng01-104F22.b_46_593 (reverse)

seq1  TGAATTAATGACATTTATAATTTTTGTTATTTGTAAAAATAAACTGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAATGACATTTATAATTTTTGTTATTTGTAAAAATAAACTGACAT  50

seq1  ATCACTGTACCTCTAATTAAGTGACAATATGTTACTTAGAATTTTTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTACCTCTAATTAAGTGACAATATGTTACTTAGAATTTTTAAAT  100

seq1  CCATCACTAAAAAAATAAATAGGCACATACTACTGAAGTCATACATAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTAAAAAAATAAATAGGCACATACTACTGAAGTCATACATAAAC  150

seq1  TTTTTCATGTACTTAAACTATATAAAGGCAACCTCTCAACTTGCCAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATGTACTTAAACTATATAAAGGCAACCTCTCAACTTGCCAATTT  200

seq1  AAAAACCTTTGTTATGAACTCCCAGGGACAAACCACCAACCAAGGAGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTTTGTTATGAACTCCCAGGGACAAACCACCAACCAAGGAGTAC  250

seq1  AAATGGAGAGACCCATGACTCCAGATGCATTTATAGCAGAGAATGATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGAGACCCATGACTCCAGATGCATTTATAGCAGAGAATGATCTT  300

seq1  GTCATGTATCAATGGGAGAAGAGACCCTTGGTCCCCTGGAGGATCCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTATCAATGGGAGAAGAGACCCTTGGTCCCCTGGAGGATCCATGA  350

seq1  CCCAGTAGAAGGGAATTCGAGGGCTGGTAAATCACTGCTGCTACCAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAGAAGGGAATTCGAGGGCTGGTAAATCACTGCTGCTACCAAAAG  400

seq1  AGGCAAAAGTCATAGAAAATGACTTTTTCTGAAACTGTAGCTCATAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAGTCATAGAAAATGACTTTTTCTGAAACTGTAGCTCATAAACC  450

seq1  ACACATTCTAAAACAAAGCACTAAACTTCTTTTACTGGGATAAGGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTCTAAAACAAAGCACTAAACTTCTTTTACTGGGATAAGGTTATT  500

seq1  TGACTTTGATTGTTCAGTGTAATGATATTGATATAATTTTGGGAATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGATTGTTCAGTGTAATGATATTGATATAATTTTGGGAATTC  548

seq1: chr4_37850217_37851330
seq2: B6Ng01-104F22.g_67_1184

seq1  GAATTCACTTCCAAAATGTGTTTTACCAAGGAATATTGCCTTTGGATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCCAAAATGTGTTTTACCAAGGAATATTGCCTTTGGATTTT  50

seq1  CTTCTGAATCTAGTCATATCATACAAATTACTACATTATCTGGCCCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAATCTAGTCATATCATACAAATTACTACATTATCTGGCCCTGAA  100

seq1  AGAAATTAGCTAGTCTACAAAAATTTTTTTTTCGTTTGATTTTGTGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAGCTAGTCTACAAAAATTTTTTTTTCGTTTGATTTTGTGAGAC  150

seq1  AGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACTCTGTAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACTCTGTAGATCA  200

seq1  GGCTGGCCTCGAACTCAGAAATCTGCCTTCCTCTGCCTCTCAAATTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCGAACTCAGAAATCTGCCTTCCTCTGCCTCTCAAATTAAAG  250

seq1  GCATGCACCACCACTGCCTGGCTTTACAAAATATTTTTAACTTAAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACCACCACTGCCTGGCTTTACAAAATATTTTTAACTTAAATGAA  300

seq1  TAGGCTAATGAACACTTGCTCATGTGCTGAGAAGGTTGCTATGAATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAATGAACACTTGCTCATGTGCTGAGAAGGTTGCTATGAATTGTT  350

seq1  AAAAGAAGTACATTCTGATCCTGACATATTGAATCTCCATTCAATCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGTACATTCTGATCCTGACATATTGAATCTCCATTCAATCAACA  400

seq1  TTTGCTACCCTCACATTTTCTAATCTCCTGACTCTAAATATTTTTAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTACCCTCACATTTTCTAATCTCCTGACTCTAAATATTTTTAAGGT  450

seq1  ATATGTGAAATAATATAATTTACATTTTACTTCAAAATGAAGAATACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGAAATAATATAATTTACATTTTACTTCAAAATGAAGAATACACA  500

seq1  CACACACACATACCACTGACACAGACTGTTGGGAACTTGTCCAGGTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATACCACTGACACAGACTGTTGGGAACTTGTCCAGGTGTTT  550

seq1  GTCTCCTATCAATATTGTTTAGCAGGAAAAGAGTAAGTCTATCATTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTATCAATATTGTTTAGCAGGAAAAGAGTAAGTCTATCATTTGAA  600

seq1  TTTTGTAAATAACATTCACTGAAAAAAATTTCAGTAGGATGAGCTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAATAACATTCACTGAAAAAAATTTCAGTAGGATGAGCTTTTGT  650

seq1  TTCACAATAATTCCCATGCAGCAAAGTGAATAAAATCAGTGGCTTGGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATAATTCCCATGCAGCAAAGTGAATAAAATCAGTGGCTTGGTCC  700

seq1  AGTTATAAAATAGTAATCTGAATTTAGGATATAGAACCAGACCATTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAAAATAGTAATCTGAATTTAGGATATAGAACCAGACCATTTGAA  750

seq1  TCACATTAAGGAGAAACACACTCTCCCATCCCAGAATCACTCATTCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTAAGGAGAAACACACTCTCCCATCCCAGAATCACTCATTCTGCA  800

seq1  GAATAAATGCT-ATGTCAATTACTGTCCTTTAATCTATTTTTTTT-ATTA  848
      ||||||||||| |||||||||||||||| |||||||||||||||| ||||
seq2  GAATAAATGCTAATGTCAATTACTGTCC-TTAATCTATTTTTTTTAATTA  849

seq1  GTCTTCCTGCAAAGCAGATGCATTATGAGTT-GGAAACTGCAGAGACTAC  897
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTCTTCCTGCAAAGCAGATGCATTATGAGTTGGGAAACTGCAGAGACTAC  899

seq1  AGAAAAGTTTAGTTTCTTCAGACAGTGACCAATAGTTGACAACATTAGAC  947
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAAAAGTTTAGTTTCTTCGGACAGTGACCAATAGTTGACAACATTAGAC  949

seq1  TGTTTTCAGAGTTGG-AGAATATGTATGCTGAAATTACAACAGTGTTTAA  996
      ||||||||||||||| |||||||||||||||||||||| ||||||  |||
seq2  TGTTTTCAGAGTTGGAAGAATATGTATGCTGAAATTAC-ACAGTG--TAA  996

seq1  C-AAAGATCAAAGTTCATATGACTTTATGTTGTTTATGTTTGCTC-TTTT  1044
      | |||||||||||||||||||||||||||||| |||||||   || ||||
seq2  CAAAAGATCAAAGTTCATATGACTTTATGTTG-TTATGTTGCTTCTTTTT  1045

seq1  TCCCTCCTTACAATTTGAGTAACTGGG-CCAGAAATA-TGGC-TCAGTA-  1090
      | ||||||||| ||||||||||||||| ||||||||| |||| |||||| 
seq2  TTCCTCCTTAC-ATTTGAGTAACTGGGCCCAGAAATATTGGCTTCAGTAG  1094

seq1  GATAAAGGTTGATGATGATCTTCA  1114
      |||||||||||| |||||||||||
seq2  GATAAAGGTTGAAGATGATCTTCA  1118