BAC Information

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BAC

Clone NameB6Ng01-108H09
Chromosome4 (Build37)
Map Location 24,847,862 - 24,848,636
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664973, F730047E07Rik, Klhl32, 1110007M04Rik
Downstream geneC230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732, Fut9, LOC100040780, Hn1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108H09.bB6Ng01-108H09.g
ACCDH915640DH915641
length1,0051,162
definitionDH915640|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H09, 5' end.DH915641|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcctgtcctgcttctcaggatcctccagcaaaaagaagatggg
aatgtgtgcctgtaaggaaaagagcctgacaaagatgttcctctacctag
gagtctggcttgggatatgatttaaagtgtgtgacccaagagctcatggt
agggttgtcagggtcgagcctctaagagctggcactcatcgtaaggtaat
tgggcaagggagtcactgtccttggaaaggattactgctggtctctgagt
ttgttagtgataaaatgggttgtcaaaaaaatgttcagcatccttaatca
tcagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtc
agaatggctaagatcaaaaattcaggtgacagcagatgctggcgaggata
tggagaaagaggaacactcctccattgttggtgggattgcaagcttgtac
aaccactctggaaatcagtctggcggttcctcagaaaattggacaaggta
ctaccggaggatccctcaatacctctcctgggcatatatccagaagatgt
cccaactagtaagaaagacacatgctccactatgttcatagcagccttat
ttataatagccagaagctggaaagaacccagatgcccctcgacagaggaa
tggatacagaaaatgtggtacatttacacaatggagtactactcagctat
taaaaagaatgaatttatgaaattcctaggcaaatggttggacctggagg
gcattatcctgagtgaggtaacccaatcacaaaagaactcaaatgatatg
tactcactgataagtggatattagcccagaaacttagaatacccaagata
taagttacaatttgcaaaacacatgaaactcaagaagaacgaagaccaaa
gtgtggacactttgccccttcttagaattgggaactaaatacccatggaa
gaagttacagagacaagtttagagctgagacaaaggatggactatctaga
gactg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatgcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgtcagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagaactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacatatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcattctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactaccttatcctgggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagatatgcccgggcctagcaaaca
cagaagtggatgcccacagtcagctaatggatggatcacagtgctcccat
ggaggagctagagaagtacccaaggagctaaaggatctgcaccctatagg
tggatcacattattgactaccagtaccccggagcctctgactctagctgc
aggtgtatcaaagatgctagtcgcatcactgaaagaaggccattggacac
aaccttatatgcccgaacagggattgcaggcaaaaggggatggcggttag
gagttgcgtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24847862_24848636
seq2: B6Ng01-108H09.b_46_820

seq1  GAATTCATCCTGTCCTGCTTCTCAGGATCCTCCAGCAAAAAGAAGATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTGTCCTGCTTCTCAGGATCCTCCAGCAAAAAGAAGATGGG  50

seq1  AATGTGTGCCTGTAAGGAAAAGAGCCTGACAAAGATGTTCCTCTACCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGCCTGTAAGGAAAAGAGCCTGACAAAGATGTTCCTCTACCTAG  100

seq1  GAGTCTGGCTTGGGATATGATTTAAAGTGTGTGACCCAAGAGCTCATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGGCTTGGGATATGATTTAAAGTGTGTGACCCAAGAGCTCATGGT  150

seq1  AGGGTTGTCAGGGTCGAGCCTCTAAGAGCTGGCACTCATCGTAAGGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGTCAGGGTCGAGCCTCTAAGAGCTGGCACTCATCGTAAGGTAAT  200

seq1  TGGGCAAGGGAGTCACTGTCCTTGGAAAGGATTACTGCTGGTCTCTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAGGGAGTCACTGTCCTTGGAAAGGATTACTGCTGGTCTCTGAGT  250

seq1  TTGTTAGTGATAAAATGGGTTGTCAAAAAAATGTTCAGCATCCTTAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTGATAAAATGGGTTGTCAAAAAAATGTTCAGCATCCTTAATCA  300

seq1  TCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTC  350

seq1  AGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATA  400

seq1  TGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTAC  450

seq1  AACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACAAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACAAGGTA  500

seq1  CTACCGGAGGATCCCTCAATACCTCTCCTGGGCATATATCCAGAAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGGAGGATCCCTCAATACCTCTCCTGGGCATATATCCAGAAGATGT  550

seq1  CCCAACTAGTAAGAAAGACACATGCTCCACTATGTTCATAGCAGCCTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTAGTAAGAAAGACACATGCTCCACTATGTTCATAGCAGCCTTAT  600

seq1  TTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCGACAGAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCGACAGAGGAA  650

seq1  TGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTAT  700

seq1  TAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGTTGGACCTGGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGTTGGACCTGGAGG  750

seq1  GCATTATCCTGAGTGAGGTAACCCA  775
      |||||||||||||||||||||||||
seq2  GCATTATCCTGAGTGAGGTAACCCA  775