BAC Information

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BAC

Clone NameB6Ng01-111F14
Chromosome4 (Build37)15 (Build37)
Map Location 64,432,446 - 64,433,69434,341,541 - 34,341,590
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneTnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111F14.bB6Ng01-111F14.g
ACCDH917716DH917717
length1,225138
definitionDH917716|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F14, 5' end.DH917717|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,432,446 - 64,433,694)(34,341,541 - 34,341,590)
sequence
gaattcactcttgcacctgcgtacaaagcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgcggcacacacggct
ctcctcagagattactggcggcacacatacgattgctcgcagcacgtacc
ggctctccataattaatattattattatttggataaatggctatttataa
acttaagaatagaaacaatgatcaccaaagatctttctttaccacttggt
aaagaaatgttcagggagtaatgaaatatgtgggaaagagatgatgggta
tggtcaacttaatgcttagcctagtgactcaatagaaaaccatttgagaa
tcaaattaaatatcaatagtaacgtataccaatccattaaattaatcaga
ttcactaatttcataatgatctaaaccaacaagcaaataactctatcaac
aaagtagataaaatataagcaaagtagaggaagctttattttttttatgt
cagtaaatatagaggtagtgacatataccatagcactaattctcaatcat
tacagctgtggtcatgactgtggtagaacaaaggatacaaggctgacaaa
agcaagagtctggggtaaactactatagcccaagattttattagttacaa
aggagaaatccaatcattagaaacatagctagatttctcagaaagacaag
aacagtataagaactggtgaatatcatcagtccttaaatcaggttcactt
aggaaaaaaagcacagttcaaactctatttttctgtcatcaagatttgga
ctctgtctccttgcagagaaggctgatacagactatgataattaaaggct
gtcctacataaatgtgtgatgtgcacttattcttagaagttttcaagagg
ctaaagaaatggctcatggattaatagtacttactgttcttctgaagacc
caatttatttcccatcatccatttaaggtggttcacaatgggtctgtaac
ctcctgccctatggaatatgatgtcttctctggcctccaatagatgtaca
catatgaaatacaccatattgcataataaaatactaaaatacagtttaaa
atgtgaagaatctacacctgagaaacctatttgacctaaggagtacagct
gaattaactaaagggaattctttgggtctaggcctctgctactgggtaaa
taattgggcacacacgaggatgttg
ataagtaaatggacaaatctagaaaaagaggaaacccaaatggctgagaa
ccactaagaaaaattcaacatctttggtcattaggaaaaagcaaaaacaa
aatcagaaacaaaaacaaacaaacaaaaacctcattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64432446_64433694
seq2: B6Ng01-111F14.b_48_1272

seq1  GAATTCACTCTTGCACCTGCGTACAAAGCTTGTTTACTAGTTAGGCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTGCACCTGCGTACAAAGCTTGTTTACTAGTTAGGCACAG  50

seq1  CGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCGCGGCACACACGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCGCGGCACACACGGCT  100

seq1  CTCCTCAGAGATTACTGGCGGCACACATACGATTGCTCGCAGCACGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAGATTACTGGCGGCACACATACGATTGCTCGCAGCACGTACC  150

seq1  GGCTCTCCATAATTAATATTATTATTATTTGGATAAATGGCTATTTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCATAATTAATATTATTATTATTTGGATAAATGGCTATTTATAA  200

seq1  ACTTAAGAATAGAAACAATGATCACCAAAGATCTTTCTTTACCACTTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGAATAGAAACAATGATCACCAAAGATCTTTCTTTACCACTTGGT  250

seq1  AAAGAAATGTTCAGGGAGTAATGAAATATGTGGGAAAGAGATGATGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATGTTCAGGGAGTAATGAAATATGTGGGAAAGAGATGATGGGTA  300

seq1  TGGTCAACTTAATGCTTAGCCTAGTGACTCAATAGAAAACCATTTGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAACTTAATGCTTAGCCTAGTGACTCAATAGAAAACCATTTGAGAA  350

seq1  TCAAATTAAATATCAATAGTAACGTATACCAATCCATTAAATTAATCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTAAATATCAATAGTAACGTATACCAATCCATTAAATTAATCAGA  400

seq1  TTCACTAATTTCATAATGATCTAAACCAACAAGCAAATAACTCTATCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTAATTTCATAATGATCTAAACCAACAAGCAAATAACTCTATCAAC  450

seq1  AAAGTAGATAAAATATAAGCAAAGTAGAGGAAGCTTTATTTTTTTTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGATAAAATATAAGCAAAGTAGAGGAAGCTTTATTTTTTTTATGT  500

seq1  CAGTAAATATAGAGGTAGTGACATATACCATAGCACTAATTCTCAATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATATAGAGGTAGTGACATATACCATAGCACTAATTCTCAATCAT  550

seq1  TACAGCTGTGGTCATGACTGTGGTAGAACAAAGGATACAAGGCTGACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGTGGTCATGACTGTGGTAGAACAAAGGATACAAGGCTGACAAA  600

seq1  AGCAAGAGTCTGGGGTAAACTACTATAGCCCAAGATTTTATTAGTTACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGTCTGGGGTAAACTACTATAGCCCAAGATTTTATTAGTTACAA  650

seq1  AGGAGAAATCCAATCATTAGAAACATAGCTAGATTTCTCAGAAAGACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAATCCAATCATTAGAAACATAGCTAGATTTCTCAGAAAGACAAG  700

seq1  AACAGTATAAGAACTGGTGAATATCATCAGTCCTTAAATCAGGTTCACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATAAGAACTGGTGAATATCATCAGTCCTTAAATCAGGTTCACTT  750

seq1  AGGAAAAAAAGCACAGTTCAAACTCTATTTTTCTGTCATCAAGATTTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAGCACAGTTCAAACTCTATTTTTCTGTCATCAAGATTTGGA  800

seq1  CTCTGTCTCCTTGCAGAGAAGGCTGATACAGACTATGATAATTAAAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCTTGCAGAGAAGGCTGATACAGACTATGATAATTAAAGGCT  850

seq1  GTCCTACATAAATGTGTGATGTGCACTTATTCTTAGAAGTTTTCAAGAGG  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTCCTACATAAATGTGTGATGTGCACTTATTCTTAGAAGTTTTCAAGA-G  899

seq1  GCTAAAGAAATGGCTCATGGATTAATAGTACTTACTGTTCTTCTGAAGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGAAATGGCTCATGGATTAATAGTACTTACTGTTCTTCTGAAGAC  949

seq1  CCAATTTATTTTCCCATCATCCATTT-AGGTGGTTCACAAT-GGTCTGTA  998
      |||||||| ||||||||||||||||| |||||||||||||| ||||||||
seq2  CCAATTTA-TTTCCCATCATCCATTTAAGGTGGTTCACAATGGGTCTGTA  998

seq1  A-CTCCTGCTCTATGGGATATGATGTCTTCTTCTGGCCTCC-ATAGATGT  1046
      | ||||||| |||||| ||||||||||||| |||||||||| ||||||||
seq2  ACCTCCTGCCCTATGGAATATGATGTCTTC-TCTGGCCTCCAATAGATGT  1047

seq1  ACACATATGACATACA-CATA-TGCATAATAAAATAACTAAAAATACAGT  1094
      |||||||||| ||||| |||| ||||||||||||| ||| ||||||||| 
seq2  ACACATATGAAATACACCATATTGCATAATAAAAT-ACT-AAAATACAG-  1094

seq1  TTTTAAAATGTGAAGAATCTAAACACTGAAGAAAACCTATTTTGAACTAA  1144
       |||||||||||||||||||| || ||||   ||||||| ||||| || |
seq2  -TTTAAAATGTGAAGAATCTACAC-CTGA--GAAACCTA-TTTGACCT-A  1138

seq1  AGGAGTACCAAGCTTTAAATATACATAAATGATATCTTTTGTGGGAACAT  1194
      ||||||||  |||  | |||  ||  ||  ||  ||||   ||||     
seq2  AGGAGTAC--AGC--TGAATTAACTAAAGGGAATTCTT---TGGG-----  1176

seq1  TAAAGACATCCTGCTAACTGTGTAAA-AATTACCTGGGGCACACAAGAGG  1243
      |  || | | ||||| |||| ||||| ||||     ||||||||| ||||
seq2  TCTAGGCCT-CTGCT-ACTGGGTAAATAATT-----GGGCACACACGAGG  1219

seq1  ATGTTG  1249
      ||||||
seq2  ATGTTG  1225

seq1: chr15_34341541_34341590
seq2: B6Ng01-111F14.g_161_212

seq1  AAAAGCCAAAAAACAAAA-CAGAAACAAAAACAAACAAACAAAA---CCA  46
      ||||||  |||||||||| |||||||||||||||||||||||||    ||
seq2  AAAAGC--AAAAACAAAATCAGAAACAAAAACAAACAAACAAAAACCTCA  48

seq1  TTCT  50
      ||||
seq2  TTCT  52