BAC Information

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BAC

Clone NameB6Ng01-114K19
Chromosome4 (Build37)
Map Location 151,428,631 - 151,564,171
singlet/doubletdoublet
Overlap geneNol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7
Upstream geneVamp3, Camta1, LOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1
Downstream geneGpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114K19.bB6Ng01-114K19.g
ACCDH920137DH920138
length1,203480
definitionDH920137|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K19, 5' end.DH920138|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,562,970 - 151,564,171)(151,428,631 - 151,429,116)
sequence
gaattctgtaagaacactccgggaaatcaaagcaagagtcttgtgacctc
agcttcttcaaagcatagacttgtttgcagtggatggcagtttccttcag
attacccagtatcacttgctgttgtttttcagttaaaggtttacactgtc
cttatatggctccacaggaaaacatggttttgccatgtgtggacttgtct
ttatgactgtattcagcctggactcatgagaactttgcttgtatgacctt
ttctgaggtgctgagtaaagccagcaactgcatgagaccttagtcctctt
cacttatcaattccgttctcccaggtcccacgacctctagagtggtgacc
cttgcccacgttacatgattacaagcactgcatatgccaggcatagtggc
acatgcctatagccccagcactggggaaggtgcagaaagggagaccagcc
cttcagaggctgagcagggaaaagcacttgacagaaaggccaacaaccga
gagatggcccagtggataagagcactggctgttcctccagaggacccata
ttccatccccagcacccacatggcagctcacaacagtcagaaactccagt
tccaggggatgcaacaccctcttccgacctccaaggacactgtgtgcaca
tgatgcacaaatacacataaaaaatgaaaaaaaaaagttccaggtaggct
gggctacatgatactatcacacacacacacacacacacacacacacacac
acacacgcacacacatgcacagactgacaaaaggaaatctcgacatgcaa
ccacacaaatgagcaaagaactgaggagggcaccactacaagcccactgt
acaaggcgcctgaatacagaacagacagattcagagaactcctcctgtct
acaatagaagtaggctgccagaaactgggaagccgaggggctgtctggta
aggctagcctagagcttccttctggagacatgcgctatgaatgcacactg
aaccacacactggaaacagttacgttcataattgggatggaactaatatt
aaacaaattttgaggaactgaaaaatatgaaaagataaatggtatctgaa
attataaagaactttttatggagcctccacctagttaaagacagtctatc
agaggggcaggctaaggtcagtgcggagtttcatctctctaacctagcac
aca
caaaggtcacacagtcgcacttgcacaaactgtctgtggctggcaaaagc
atcctttgccagggcgtgagggaatcatagtcggctgctttgggcaggtg
taagccacaccataagcctgcctgggattaaaacaaaaagcatactctta
aaatagttctgtggtttgtttgtttgttttttggtttttccagacagggt
ttctctgtgtggccctggctgtccaggaactcactttgtagaccaggctg
gcctggagctcagaaatctgcctgcctctgcctcccgagtgctgggatta
aaggcttgtgccaccactgcctggcccaccctctctccctccctccctcc
ctccctcccttccttccttccttccttcctttcttttttaggacaccaaa
ttgtagaattgactacactgacttgcagctcgtgttctagcttatgactt
agcatgagagtgatgggtttgtttctaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151562970_151564171
seq2: B6Ng01-114K19.b_43_1245 (reverse)

seq1  TGTGTGCTGGGTT--AGAGATGAACATCCGCACTTGACCTTAGCCTG-CC  47
      |||||||| ||||  |||||||||  ||||||| ||||||||||||| ||
seq2  TGTGTGCTAGGTTAGAGAGATGAAACTCCGCAC-TGACCTTAGCCTGCCC  49

seq1  CTCTGATAGGCTTGTCTTTTACTAGTTG--AGCT-CAT-AAAAGTTCTTT  93
      ||||||||| | ||||||| ||||| ||   ||| ||| |||||||||||
seq2  CTCTGATAGAC-TGTCTTTAACTAGGTGGAGGCTCCATAAAAAGTTCTTT  98

seq1  ATAAATTTCAGATACAATTTATCTTCTCATATTTTTCCAGTTCCTCAAAA  143
      || |||||||||||| ||||||||| |||||||||| |||||||||||||
seq2  AT-AATTTCAGATACCATTTATCTTTTCATATTTTT-CAGTTCCTCAAAA  146

seq1  TTTGTTTAATAATAGGTTCCATCCCATTTATGAACGTAACTGTTTCCCAG  193
      ||||||||||| || ||||||||||| |||||||||||||||||| ||||
seq2  TTTGTTTAATATTA-GTTCCATCCCAATTATGAACGTAACTGTTT-CCAG  194

seq1  TGTGTGGTTCAGTGTGCATTCATAGCGCATGTCTCCAGAAGGAAGCTCTA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTTCAGTGTGCATTCATAGCGCATGTCTCCAGAAGGAAGCTCTA  244

seq1  GGCTAGCCTTACCAGACAGCCCCTCGGCTTCCCAGTTTCTGGCAGCCTAC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGCTAGCCTTACCAGACAGCCCCTCGGCTTCCCAGTTTCTGGCAGCCTA-  293

seq1  CTTCTATTGTAGACAGGAGGAGTTCTCTGAATCTGTCTGTTCTGTATTCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTGTAGACAGGAGGAGTTCTCTGAATCTGTCTGTTCTGTATTCA  343

seq1  GGCGCCTTGTACAGT-GGCTTGTAGTGGTGCCCTCCTCAGTTCTTTGCTC  392
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGCGCCTTGTACAGTGGGCTTGTAGTGGTGCCCTCCTCAGTTCTTTGCTC  393

seq1  ATTTGTGTGGTTGCATGTCGAGATTTCCTTTTGTCAGTCTGTGCATGTGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTGGTTGCATGTCGAGATTTCCTTTTGTCAGTCTGTGCATGTGT  443

seq1  GTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAGTAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAGTAT  493

seq1  CATGTAGCCCAGCCTACCTGGAACTTTTTTTTTTCATTTTTTATGTGTAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGCCCAGCCTACCTGGAACTTTTTTTTTTCATTTTTTATGTGTAT  543

seq1  TTGTGCATCATGTGCACACAGTGTCCTTGGAGGTCGGAAGAGGGTGTTGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATCATGTGCACACAGTGTCCTTGGAGGTCGGAAGAGGGTGTTGC  593

seq1  ATCCCCTGGAACTGGAGTTTCTGACTGTTGTGAGCTGCCATGTGGGTGCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTGGAACTGGAGTTTCTGACTGTTGTGAGCTGCCATGTGGGTGCT  643

seq1  GGGGATGGAATATGGGTCCTCTGGAGGAACAGCCAGTGCTCTTATCCACT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGGAATATGGGTCCTCTGGAGGAACAGCCAGTGCTCTTATCCACT  693

seq1  GGGCCATCTCTCGGTTGTTGGCCTTTCTGTCAAGTGCTTTTCCCTGCTCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATCTCTCGGTTGTTGGCCTTTCTGTCAAGTGCTTTTCCCTGCTCA  743

seq1  GCCTCTGAAGGGCTGGTCTCCCTTTCTGCACCTTCCCCAGTGCTGGGGCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAAGGGCTGGTCTCCCTTTCTGCACCTTCCCCAGTGCTGGGGCT  793

seq1  ATAGGCATGTGCCACTATGCCTGGCATATGCAGTGCTTGTAATCATGTAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATGTGCCACTATGCCTGGCATATGCAGTGCTTGTAATCATGTAA  843

seq1  CGTGGGCAAGGGTCACCACTCTAGAGGTCGTGGGACCTGGGAGAACGGAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGCAAGGGTCACCACTCTAGAGGTCGTGGGACCTGGGAGAACGGAA  893

seq1  TTGATAAGTGAAGAGGACTAAGGTCTCATGCAGTTGCTGGCTTTACTCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAGTGAAGAGGACTAAGGTCTCATGCAGTTGCTGGCTTTACTCAG  943

seq1  CACCTCAGAAAAGGTCATACAAGCAAAGTTCTCATGAGTCCAGGCTGAAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGAAAAGGTCATACAAGCAAAGTTCTCATGAGTCCAGGCTGAAT  993

seq1  ACAGTCATAAAGACAAGTCCACACATGGCAAAACCATGTTTTCCTGTGGA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATAAAGACAAGTCCACACATGGCAAAACCATGTTTTCCTGTGGA  1043

seq1  GCCATATAAGGACAGTGTAAACCTTTAACTGAAAAACAACAGCAAGTGAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATAAGGACAGTGTAAACCTTTAACTGAAAAACAACAGCAAGTGAT  1093

seq1  ACTGGGTAATCTGAAGGAAACTGCCATCCACTGCAAACAAGTCTATGCTT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTAATCTGAAGGAAACTGCCATCCACTGCAAACAAGTCTATGCTT  1143

seq1  TGAAGAAGCTGAGGTCACAAGACTCTTGCTTTGATTTCCCGGAGTGTTCT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGCTGAGGTCACAAGACTCTTGCTTTGATTTCCCGGAGTGTTCT  1193

seq1  TACAGAATTC  1202
      ||||||||||
seq2  TACAGAATTC  1203

seq1: chr4_151428631_151429116
seq2: B6Ng01-114K19.g_68_553

seq1  GAATTCCAAAGGTCACACAGTCGCACTTGCACAAACTGTCTGTGGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGTCACACAGTCGCACTTGCACAAACTGTCTGTGGCTGGC  50

seq1  AAAAGCATCCTTTGCCAGGGCGTGAGGGAATCATAGTCGGCTGCTTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATCCTTTGCCAGGGCGTGAGGGAATCATAGTCGGCTGCTTTGGG  100

seq1  CAGGTGTAAGCCACACCATAAGCCTGCCTGGGATTAAAACAAAAAGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTAAGCCACACCATAAGCCTGCCTGGGATTAAAACAAAAAGCATA  150

seq1  CTCTTAAAATAGTTCTGTGGTTTGTTTGTTTGTTTTTTGGTTTTTCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAAATAGTTCTGTGGTTTGTTTGTTTGTTTTTTGGTTTTTCCAGA  200

seq1  CAGGGTTTCTCTGTGTGGCCCTGGCTGTCCAGGAACTCACTTTGTAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTCTGTGTGGCCCTGGCTGTCCAGGAACTCACTTTGTAGACC  250

seq1  AGGCTGGCCTGGAGCTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCTGGAGCTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTG  300

seq1  GGATTAAAGGCTTGTGCCACCACTGCCTGGCCCACCCTCTCTCCCTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAGGCTTGTGCCACCACTGCCTGGCCCACCCTCTCTCCCTCCCT  350

seq1  CCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTTCTTTTTTAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTTCTTTTTTAGGAC  400

seq1  ACCAAATTGTAGAATTGACTACACTGACTTGCAGCTCGTGTTCTAGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATTGTAGAATTGACTACACTGACTTGCAGCTCGTGTTCTAGCTTA  450

seq1  TGACGTAGCATGAGAGTGATGGGTTTGCTTCTAAAA  486
      |||| |||||||||||||||||||||| ||||||||
seq2  TGACTTAGCATGAGAGTGATGGGTTTGTTTCTAAAA  486