BAC Information

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BAC

Clone NameB6Ng01-117I06
Chromosome4 (Build37)
Map Location 50,811,351 - 50,812,340
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666663
Downstream geneLOC100040979, LOC666681, LOC100040814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117I06.bB6Ng01-117I06.g
ACCDH922237DH922238
length1,130195
definitionDH922237|Mus musculus domesticus DNA, BAC clone: B6Ng01-117I06, 5' end.DH922238|Mus musculus domesticus DNA, BAC clone: B6Ng01-117I06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaccaagcagtcattttctggatatgtgtttggagcctcatat
cagctggtatatgctacctggttggtggctcagtgtctgagagatcttgg
ggtcctggttagtcgagtctgctggtcttcctatggggtcaccctattcc
tcctcttcttctagattttccctaattcaaccacagggggcaccagactc
ttttcattggttggatgtaaatatctacatctgactctttcagctgcttg
ttggatctttcagagggcagttataataggccccttttatgagaacacca
tagcatttgtaatagtgtcagcccttggggcctccgcttgagctggatcc
aaatttggggctgtcacttgacctcattttcctcagtctcttccctatcc
cacagtcaaaacctctgatccagaattgtccctgtctgaaagaactgcag
ggacaaaaatggagagttctccatcttgatcagaaggcaatctctaacag
attgacttatagtcatctagaaggaggattgctttcaaactgaatagaac
ttcaaagtccacacccacagtgatgcaattccttgcacaaaaccacatct
cctaatagtgtcccttcctctaggccaagcatattcaaatcactacaata
tgcaagtgtgaatctttgtatctatctacttgaaagaaatattaaaaaga
gtgatttgattttaatatgcttttacataacatatttgaggggaaatgat
taaatatgacttttgcaataattgaagttagtaacaggaaaattcccctt
cacattatgattctttgcttctaatctcacacttgtagaaatatggtata
cacaaatgatgcacaggtaccaacacatcataataaccaagaaaataaaa
gcagagtaggttgaagagataaaagttaccatgtactttttgatgcaatt
aaacatcatatttattgttattattattattatctgaaattagattcttc
tctcacacagtaaatctaacacagttttgcctctctctactcttctagtt
ctttagaacctcccctctctctgagagccactctctttcagttacatctt
cgaaaaacaaagcttccagagaccacagct
acaaaaagggaaattaaagtggctggtaaacacataaagaaatgtcgaac
atcttcctcatcagaaaaatacaaataaagagtactttgagatttcatct
tacacccctcaagataactaagattaataatgaaaataattgtagtagta
gtagtagaagtagtagtagtagtagtagtagtagtagtagtagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_50811351_50812340
seq2: B6Ng01-117I06.b_194_1174

seq1  CTCCTCTTCTTCTAGATTTTCCCTAATTCAACCACAGGGGGCACCAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTCTTCTAGATTTTCCCTAATTCAACCACAGGGGGCACCAGACT  50

seq1  CTTTTCATTGGTTGGATGTAAATATCTACATCTGACTCTTTCAGCTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTGGTTGGATGTAAATATCTACATCTGACTCTTTCAGCTGCTT  100

seq1  GTTGGATCTTTCAGAGGGCAGTTATAATAGGCCCCTTTTATGAGAACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATCTTTCAGAGGGCAGTTATAATAGGCCCCTTTTATGAGAACACC  150

seq1  ATAGCATTTGTAATAGTGTCAGCCCTTGGGGCCTCCGCTTGAGCTGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTTGTAATAGTGTCAGCCCTTGGGGCCTCCGCTTGAGCTGGATC  200

seq1  CAAATTTGGGGCTGTCACTTGACCTCATTTTCCTCAGTCTCTTCCCTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGGGGCTGTCACTTGACCTCATTTTCCTCAGTCTCTTCCCTATC  250

seq1  CCACAGTCAAAACCTCTGATCCAGAATTGTCCCTGTCTGAAAGAACTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCAAAACCTCTGATCCAGAATTGTCCCTGTCTGAAAGAACTGCA  300

seq1  GGGACAAAAATGGAGAGTTCTCCATCTTGATCAGAAGGCAATCTCTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAAAATGGAGAGTTCTCCATCTTGATCAGAAGGCAATCTCTAACA  350

seq1  GATTGACTTATAGTCATCTAGAAGGAGGATTGCTTTCAAACTGAATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACTTATAGTCATCTAGAAGGAGGATTGCTTTCAAACTGAATAGAA  400

seq1  CTTCAAAGTCCACACCCACAGTGATGCAATTCCTTGCACAAAACCACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGTCCACACCCACAGTGATGCAATTCCTTGCACAAAACCACATC  450

seq1  TCCTAATAGTGTCCCTTCCTCTAGGCCAAGCATATTCAAATCACTACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATAGTGTCCCTTCCTCTAGGCCAAGCATATTCAAATCACTACAAT  500

seq1  ATGCAAGTGTGAATCTTTGTATCTATCTACTTGAAAGAAATATTAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGTGTGAATCTTTGTATCTATCTACTTGAAAGAAATATTAAAAAG  550

seq1  AGTGATTTGATTTTAATATGCTTTTACATAACATATTTGAGGGGAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTGATTTTAATATGCTTTTACATAACATATTTGAGGGGAAATGA  600

seq1  TTAAATATGACTTTTGCAATAATTGAAGTTAGTAACAGGAAAATTCCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATGACTTTTGCAATAATTGAAGTTAGTAACAGGAAAATTCCCCT  650

seq1  TCACATTATGATTCTTTGCTTCTAATCTCACACTTGTAGAAATATGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTATGATTCTTTGCTTCTAATCTCACACTTGTAGAAATATGGTAT  700

seq1  ACACAAATGATGCACAGGTACCAACACATCATAATAACCAAGAAAAATAA  750
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACACAAATGATGCACAGGTACCAACACATCATAATAACCAAG-AAAATAA  749

seq1  AAGCAGAGTAGGTTGAAGAGATAAAAGTTACCAATGTACTTTTTGATGCA  800
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  AAGCAGAGTAGGTTGAAGAGATAAAAGTTACC-ATGTACTTTTTGATGC-  797

seq1  AATTAAACATCATATTTATTGTTATTATTATTATTATCTGAAATTAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAACATCATATTTATTGTTATTATTATTATTATCTGAAATTAGATT  847

seq1  CTTCTCTCACACAGTACATCCTAACCACAGTTTTGCCTCTCTCTACTCCT  900
      |||||||||||||||| || |||| |||||||||||||||||||||| ||
seq2  CTTCTCTCACACAGTAAAT-CTAA-CACAGTTTTGCCTCTCTCTACT-CT  894

seq1  CCTAGTTCTTTAGGACCTCCCCTCTCTCTGAGAGCCACTCTCTTTCAGTT  950
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTCTTTAGAACCTCCCCTCTCTCTGAGAGCCACTCTCTTTCAGTT  944

seq1  ACATCTTCAGAAAAACAAAGGCTTCCAAGAGACAACAGCT  990
      |||||||| |||||||||| |||||| |||||| ||||||
seq2  ACATCTTC-GAAAAACAAA-GCTTCC-AGAGACCACAGCT  981