BAC Information

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BAC

Clone NameB6Ng01-117M01
Chromosome4 (Build37)
Map Location 92,191,809 - 92,192,952
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117M01.bB6Ng01-117M01.g
ACCDH922411DH922412
length1,143936
definitionDH922411|Mus musculus domesticus DNA, BAC clone: B6Ng01-117M01, 5' end.DH922412|Mus musculus domesticus DNA, BAC clone: B6Ng01-117M01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccctatactatggcatggagtctttccaggaccaagggcctctc
cttctcttgatgttcaacaaggccatcatctgcaatatacgcactagatc
catgggtcccctcatttgtaacctttggttggtggttcaatgtacatggt
ggttaaattttgtctatttttcttttcttctcctctctctctctctctct
ctctcactctctctctctcttttgtttgtttgtgttgttttttgagacag
ggtttctctgtatagctctggctgtcctggaacttactttgtagaccagg
ctggccttgaactcagaaatctgcctgcctctgcctcccgagtgttggga
ttaaaggcgtgtgccaccatgcctggctcctttctcttaatagctgtaaa
ccctatcattttatatccagaaaactgcattttgaaagacactaaaaaat
taggttatgtcattctatatgtttgttatataaaaacatacacatattag
ttgtatgtttcaaattataatttgtataattggaagctataattactatt
attgttaattattccttaggttttgaatattttggcatatataaaatact
aaaaccatttaaatggttactttgtagtaggctcactctataacttaata
attcatggtaaaattgattgtcaagatgaccctgttctctagtgactaat
ttttggataactcaataaatgaatggataatacctgctttcatttgggtc
tctaaagtatccctgattcttgaatatataatatttctaacttttttagt
aaccttatgagctatactcagtttagtcttaggaacttgattttttatca
aaaataaaaggtcaaagacttgaaagttgaagactcatgaacactataat
attctttattgagaagagaaatgtaaataaagacaacagccaatataaaa
atacaagaagaaaaaatacatctatatccttggtttggccttaaatggca
tggaaacacagcaagtgaatggctggcttatatggcagtatcaatacaag
cttcattctttacattttatcttgtaagttttgggacttttaagaaactg
aaactctttttttttttcctttttgcctagtttttgttttctt

gaattctttgtttagttctgtacccttttttttttaaacagggtaatttg
tttctctggagtctgacttcttgagttctttgtatatattggatattatc
cctctatcagataatagcgttggtgaagagccttcccaatatatttgtgg
tgtttttgtcttcttgacattgtcctttgccttacagaagctttgcaatt
ttatgaggtcccatttggtgattcttgatcttacatcacaagtcattggt
gttctgttcaggaatttttcccttgtgcccatatgttcaaggctcttccc
cactttctcttctataagtttcaatgtatttggtttatgtgaaggtcctt
gatacacttggacttgacctttatacaaggagatatgaatgggttgattt
gccttcttctacatgctaacagccagttgaactagcaccatttgttgata
atgctgtcttttttttccactggaagattttagctcctttgtcaaagatc
aagtgaccataggtgtgtgggttcatttctgggtcttcaactctgttgca
ttgatctacctgtctgtcaccgtgccagtttcatgcagtttttaccacaa
ttgctctgtagtacagcttgaggtcagggatggtgattccaccagaggtt
cttttattgttgggaagagtttttgctatcctaggttttttgttatttca
gaagaatttgcaaattgctctttctaatcatttgaagacttgatttgaaa
ttttgatggggattaccttgagtaggtaatagcttttgtcaagatgacta
ttttttactatattaatgctgccaatccatgagcatgggagatctttcca
tcttctgagatcttcttcaattcctttctcagagacttgagttcgtgtca
tagagatctttcatatacttagtaagaagccacccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92191809_92192952
seq2: B6Ng01-117M01.b_47_1189 (reverse)

seq1  AAGAAAAAAAAAACTAGGCAAAAAGGAAAAAAAAAAAGAGTATCAGTTTC  50
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGAAAACAAAAACTAGGCAAAAAGGAAAAAAAAAAAGAGTTTCAGTTTC  50

seq1  -TAAAAGT-CCAAAACTTACAAGATAAAATGTAAAGAATGAAGCTTGGTA  98
       ||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  TTAAAAGTCCCAAAACTTACAAGATAAAATGTAAAGAATGAAGCTT-GTA  99

seq1  TGAATACTGCCATATTAAGCCAGCCATTCACTTGCTGGTGTTTCAATGCC  148
      |  ||||||||||| ||||||||||||||||||||| ||||||| |||||
seq2  TTGATACTGCCATA-TAAGCCAGCCATTCACTTGCT-GTGTTTCCATGCC  147

seq1  ATTTAAGGCCAAACCAAGGATATAGATGTATTTTTTCTTCTTGTTATTTT  198
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTTAAGGCCAAACCAAGGATATAGATGTATTTTTTCTTCTTG-TATTTT  196

seq1  TATATTGGCTGTTGTCTTTATTTACATTTCTCTTCTCAATAAAGAATATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGGCTGTTGTCTTTATTTACATTTCTCTTCTCAATAAAGAATATT  246

seq1  ATAGTGTTCATGAGTCTTCAACTTTCAAGTCTTTGACCTTTTATTTTTTG  298
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATAGTGTTCATGAGTCTTCAACTTTCAAGTCTTTGACCTTTTA-TTTTTG  295

seq1  ATAAAAAATCAAGTTCCT-AGACTAAACTGAGTATAGCTCATAAGGTTAC  347
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAAAAAATCAAGTTCCTAAGACTAAACTGAGTATAGCTCATAAGGTTAC  345

seq1  T-AAAAAGTTAGAAATATTATATATTCAAGAATCAGGGATACTTTAGAGA  396
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGTTAGAAATATTATATATTCAAGAATCAGGGATACTTTAGAGA  395

seq1  CCCAAATGAAAGCAGGTATTATCCATTCATTTATTGAGTTATCCAAAAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATGAAAGCAGGTATTATCCATTCATTTATTGAGTTATCCAAAAAT  445

seq1  TAGTCACTAGAGAACAGGGTCATCTTGACAATCAATTTTACCATGAATTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACTAGAGAACAGGGTCATCTTGACAATCAATTTTACCATGAATTA  495

seq1  TTAAGTTATAGAGTGAGCCTACTACAAAGTAACCATTTAAATGGTTTTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTATAGAGTGAGCCTACTACAAAGTAACCATTTAAATGGTTTTAG  545

seq1  TATTTTATATATGCCAAAATATTCAAAACCTAAGGAATAATTAACAATAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATATATGCCAAAATATTCAAAACCTAAGGAATAATTAACAATAA  595

seq1  TAGTAATTATAGCTTCCAATTATACAAATTATAATTTGAAACATACAACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTATAGCTTCCAATTATACAAATTATAATTTGAAACATACAACT  645

seq1  AATATGTGTATGTTTTTATATAACAAACATATAGAATGACATAACCTAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTATGTTTTTATATAACAAACATATAGAATGACATAACCTAAT  695

seq1  TTTTTAGTGTCTTTCAAAATGCAGTTTTCTGGATATAAAATGATAGGGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTGTCTTTCAAAATGCAGTTTTCTGGATATAAAATGATAGGGTT  745

seq1  TACAGCTATTAAGAGAAAGGAGCCAGGCATGGTGGCACACGCCTTTAATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTATTAAGAGAAAGGAGCCAGGCATGGTGGCACACGCCTTTAATC  795

seq1  CCAACACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCC  845

seq1  TGGTCTACAAAGTAAGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAAAGTAAGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCT  895

seq1  GTCTCAAAAAACAACACAAACAAACAAAAGAGAGAGAGAGAGTGAGAGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAAAACAACACAAACAAACAAAAGAGAGAGAGAGAGTGAGAGAG  945

seq1  AGAGAGAGAGAGAGAGGAGAAGAAAAGAAAAATAGACAAAATTTAACCAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGGAGAAGAAAAGAAAAATAGACAAAATTTAACCAC  995

seq1  CATGTACATTGAACCACCAACCAAAGGTTACAAATGAGGGGACCCATGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACATTGAACCACCAACCAAAGGTTACAAATGAGGGGACCCATGGA  1045

seq1  TCTAGTGCGTATATTGCAGATGATGGCCTTGTTGAACATCAAGAGAAGGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGCGTATATTGCAGATGATGGCCTTGTTGAACATCAAGAGAAGGA  1095

seq1  GAGGCCCTTGGTCCTGGAAAGACTCCATGCCATAGTATAGGGGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCTTGGTCCTGGAAAGACTCCATGCCATAGTATAGGGGAATTC  1143


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