BAC Information

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BAC

Clone NameB6Ng01-119A18
Chromosome4 (Build37)
Map Location 140,966,805 - 141,106,600
singlet/doubletdoublet
Overlap geneClcnkb, Hspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik
Upstream geneArhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1, Padi2, Sdhb, Atp13a2, Mfap2, Crocc, Necap2, LOC638991, Spata21, D4Ertd22e, Fbxo42, 6330545A04Rik, Arhgef19, Epha2, Gm693, Clcnka
Downstream geneFblim1, BC025833, Slc25a34, Plekhm2, Ddi2, Agmat, Dnajc16, Casp9, Ela2a, Ctrc, Efhd2, Fhad1, Tmem51, 9030409G11Rik, EG665983
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119A18.bB6Ng01-119A18.g
ACCDH923361DH923362
length176888
definitionDH923361|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A18, 5' end.DH923362|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,106,425 - 141,106,600)(140,966,805 - 140,967,692)
sequence
ttgattgtcctttttgtctctgtcttagggtttcttccctttgtctatct
ctatgttggtgagctcactcagttcccagaccttaagtgctacctattta
gggagaacttacttagacacacactcacaactacacacaagcctaaggtg
tttgacgtcatggcggtggtggggat
gaattctaggcaccgcagtggctctcaacctaagaattttgacttctttg
ggaatcacatatcagacaccctgcgtctcagatatttacattttgattca
taacagtcaccaagttacgggctggggaaatgcctcagcggttaagagca
ctgactgctcttccagaggtcctgagttcaaatcccagcaaccacatggt
ggctcacaaccatctgtaatgggatctgatgccctcttctagtgtgtctg
aagagtacaatgtactcatatacataaataaatctttttttttaaaaaaa
aacagtaaccaaattacagtttttaagtagcaaccgaatatttttattat
tcagggtggaagcattgggaaggttgggaaccattgtagaagaacagaag
agaggggagggtggtctgaaaggagatggaaggataaaggagaggagtca
cagaagagagagggtggagactaggtcccaatatggtgctcaccctgttc
attgttgaagactgccaggaggtggaacataaaggccccacaggtggcag
cgaagaagcccctccagtaatcccagacggagaagtgagaggacatgacc
tcgatgctgaacaggacacctaggggacacgcgtctcaggaggacttcta
tctcccctggctgcaggacacgggagtacagaaagggtgagggagctctc
accgctgatgggagctgcgaagaccgtggccacacccactgctgctcctg
cggccaacagttccttttctttggtcttgctctgggaggaacagcatcct
gggctttgatcttttatacccgttccctaggagacccaaggcctgtgccc
ttcacttaggttcccgacggttttggtgcacacgcggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_141106425_141106600
seq2: B6Ng01-119A18.b_49_224 (reverse)

seq1  ATCCCCACCACCGCCATGACGTCAAACACCTTAGGCTTGTGTGTAGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCACCACCGCCATGACGTCAAACACCTTAGGCTTGTGTGTAGTTGT  50

seq1  GAGTGTGTGTCTAAGTAAGTTCTCCCTAAATAGGTAGCACTTAAGGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTGTCTAAGTAAGTTCTCCCTAAATAGGTAGCACTTAAGGTCTG  100

seq1  GGAACTGAGTGAGCTCACCAACATAGAGATAGACAAAGGGAAGAAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGAGTGAGCTCACCAACATAGAGATAGACAAAGGGAAGAAACCCT  150

seq1  AAGACAGAGACAAAAAGGACAATCAA  176
      ||||||||||||||||||||||||||
seq2  AAGACAGAGACAAAAAGGACAATCAA  176

seq1: chr4_140966805_140967692
seq2: B6Ng01-119A18.g_66_953

seq1  GAATTCTAGGCACCGCAGTGGCTCTCAACCTAAGAATTTTGACTTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCACCGCAGTGGCTCTCAACCTAAGAATTTTGACTTCTTTG  50

seq1  GGAATCACATATCAGACACCCTGCGTCTCAGATATTTACATTTTGATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCACATATCAGACACCCTGCGTCTCAGATATTTACATTTTGATTCA  100

seq1  TAACAGTCACCAAGTTACGGGCTGGGGAAATGCCTCAGCGGTTAAGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCACCAAGTTACGGGCTGGGGAAATGCCTCAGCGGTTAAGAGCA  150

seq1  CTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT  200

seq1  GGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTAGTGTGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTAGTGTGTCTG  250

seq1  AAGAGTACAATGTACTCATATACATAAATAAATCTTTTTTTTTAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTACAATGTACTCATATACATAAATAAATCTTTTTTTTTAAAAAAA  300

seq1  AACAGTAACCAAATTACAGTTTTTAAGTAGCAACCGAATATTTTTATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAACCAAATTACAGTTTTTAAGTAGCAACCGAATATTTTTATTAT  350

seq1  TCAGGGTGGAAGCATTGGGAAGGTTGGGAACCATTGTAGAAGAACAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGGAAGCATTGGGAAGGTTGGGAACCATTGTAGAAGAACAGAAG  400

seq1  AGAGGGGAGGGTGGTCTGAAAGGAGATGGAAGGATAAAGGAGAGGAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGAGGGTGGTCTGAAAGGAGATGGAAGGATAAAGGAGAGGAGTCA  450

seq1  CAGAAGAGAGAGGGTGGAGACTAGGTCCCAATATGGTGCTCACCCTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGAGAGGGTGGAGACTAGGTCCCAATATGGTGCTCACCCTGTTC  500

seq1  ATTGTTGAAGACTGCCAGGAGGTGGAACATAAAGGCCCCACAGGTGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGAAGACTGCCAGGAGGTGGAACATAAAGGCCCCACAGGTGGCAG  550

seq1  CGAAGAAGCCCCTCCAGTAATCCCAGACGGAGAAGTGAGAGGACATGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAAGCCCCTCCAGTAATCCCAGACGGAGAAGTGAGAGGACATGACC  600

seq1  TCGATGCTGAACAGGACACCTAGGGGACACGCGTCTCAGGAGGACTTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGCTGAACAGGACACCTAGGGGACACGCGTCTCAGGAGGACTTCTA  650

seq1  TC-CCCCTGGCTGCAGGACACGGGAGTACAG-AAGGGTGAGGGAGCTCTC  698
      || |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTCCCCTGGCTGCAGGACACGGGAGTACAGAAAGGGTGAGGGAGCTCTC  700

seq1  ACCGCTGATGGGAGCTGCGAAGACCGTGGCCACACCCACTGCTGCTCCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTGATGGGAGCTGCGAAGACCGTGGCCACACCCACTGCTGCTCCTG  750

seq1  CGGCCAACAGTTCCATTTCTTTGGTCTTGCTCTGGGAGGAACAGCATCCT  798
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGGCCAACAGTTCCTTTTCTTTGGTCTTGCTCTGGGAGGAACAGCATCCT  800

seq1  GGGCTTTGATCTTTTATACCCGTTCCCCTAGGAGACCCAA-GCCTGTGCC  847
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  GGGCTTTGATCTTTTATACCCGTT-CCCTAGGAGACCCAAGGCCTGTGCC  849

seq1  CCTCACCTCAGGTTCCCCGACGGTCTTGGTGCGCACGCGGC  888
      | ||| || ||||| ||||||||| ||||||| ||||||||
seq2  CTTCA-CTTAGGTT-CCCGACGGTTTTGGTGCACACGCGGC  888