BAC Information

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BAC

Clone NameB6Ng01-121E14
Chromosome4 (Build37)
Map Location 70,933,377 - 70,934,414
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk5rap2, Megf9, LOC100039565
Downstream geneLOC100039979, LOC667638, EG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121E14.bB6Ng01-121E14.g
ACCDH925009DH925010
length1,2661,032
definitionDH925009|Mus musculus domesticus DNA, BAC clone: B6Ng01-121E14, 5' end.DH925010|Mus musculus domesticus DNA, BAC clone: B6Ng01-121E14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattttattcaatattagaagggctactctagcttgtttcttcg
gaccatttgcttggaaaattatttttccagcctttcactctgaggtagtg
tctgtctttttccttgaggtgtgtttcctgtaatcagcaaaatgttgggt
cctgtttgtgtagccagtctaatagtctatatctttttactggggaattg
agtccattgatgttatgagaaattaaagaaaagcaattgttgcttcctgt
tgtttttgttgttaaagttgggattctgatcttgtgactgtcttctttta
ggtttgttgaaggattactttcttgctttttctagggagtagtttctgtc
ctttgttggtgttttccctttattatcctttgaagggttggattcgtgga
aatataatgtgtgaatttggttttatcatggagtactttggtttctccaa
ctatagtaattgagagttttgctgagtatagtagccaggactggcatttg
tgttctcttggggtccgcataacatctgtccaggatctactggctttcat
aagtctctggagagaagactggtgtaattctaataggcctgcctttatac
attacttgacctttttttctaactgcttttattttttttcctattttttt
taattaggtactttcctcaattgcatttccaatgctatcccaaaagaccc
cccataacctcccccccactcccctacccacccattcacactttttggca
ctggcattcccctgtactggggcatataaagtttgcatgtccaatgggcc
tctctttccagtgatggccaactaggccatcttttgatacatatgcagct
agagacaagagctctggggtactggttagttcataatgttgttccaccta
tagggttgcagatctctttagctccttgggtactttctctagctctcaat
ttggggaccagagatccaaacatcacttatgtgtttgctaggctccggca
gagtttcacagagacagcttatatcaggtcctttcagcaaactcctgcta
gtgtatgcaatgatgtctccatttcaggctgaattatggatggatccctg
ggtatggcaatcgctagaaggacatcctttgtcctcacgtccaacttgtc
tggaactccttcatgggtgcttgtccatttctagagaagagacacaggtc
aacttagacagctctctcagtcatgttgccaatggatttagaattacgtg
gaacacaagactctcg
gaattctcatttttgctgaagaataattttgatacatttctttcttcctg
aatgttagatctgctttctctttcagctaacaaggtgaagtatgcattgt
gcagaaaccgagttataggagccagattcactggaattgtctatagagga
aaaggatttggtttgcttttctgtgataaaaacataaatttgatgcatgt
agatatgtagacttttttctaccatatttaattattgtcttggcagtcaa
acctaaggctttagacataatagatgagtgatctaccactgacttatctt
cccattcgtctattcatttttcattgttgagtttgatttttgacatcttc
atacatgcatagtatacattctgattattataaatttctttctctaattt
cctttaactcccattttcatgtttctgagacagggtcttaccatataact
taagcagcctttattcttatgattacagacctctacaagcaaacggaaca
tgactgatattttagtgaataacttgatgtactttaagaagtgtgtaaag
atgaaagcagaattatgatgataaaatctaattctcaaaattagaaattt
ataaagtcatttttccaataaataaaaatctaataaatgtttttaatgtc
ttcttgttgattacattaatcagaaaaaaatgacaaactctaaagcacta
ctcctacagaaatattttccagtgagccctacctaggtgaaaaccagaag
agaaaattgaaagaaacaattgcaagcatgaattcaaagagactaaagaa
gacatgaacaaaagcctcaatgaacataaacagaacatgaaagagacaat
cagataaatggtctctaaatgagatgaaaattctggatttaaaaattgag
ttcaataaatagatacaaagctcaaggtagaatgaagagggaattaacaa
gttagggtaaagcctcatcagtagaatggatcaagttgaagtgggatatt
aagatttcagataaggaaaggaactgttctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70933377_70934414
seq2: B6Ng01-121E14.g_67_1098 (reverse)

seq1  ACAGTACAGTTCCTTTCCTTTATCTTGAAATCTTGATATCCCACCTTCAA  50
      |||| ||||||||||||| ||||| ||||||||| |||||||| ||||||
seq2  ACAGAACAGTTCCTTTCC-TTATC-TGAAATCTTAATATCCCA-CTTCAA  47

seq1  CTTGATCCATTCTACTGATGAGGCTTTACCCTAACTTGTTAATTCCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCCATTCTACTGATGAGGCTTTACCCTAACTTGTTAATTCCCTCT  97

seq1  TCATTCTACCTTGAGGCTTTGTATCTATTTATTGAACTCAATTTTTAAAT  150
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCATTCTACCTTGA-GCTTTGTATCTATTTATTGAACTCAATTTTTAAAT  146

seq1  CCAGAATTTTTCATCTCATTTAGAGACCATTTATCTTGATGGTCTCTTTC  200
      |||||| |||||||||||||||||||||||||||| |||| |||||||||
seq2  CCAGAA-TTTTCATCTCATTTAGAGACCATTTATC-TGATTGTCTCTTTC  194

seq1  ATGTTCTGTTTATGTTCATTGAGGCTTTTGTTCATGTCTTCTTTAGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGTTTATGTTCATTGAGGCTTTTGTTCATGTCTTCTTTAGTCTC  244

seq1  TTTGAATTCATGCTTGCAATTGTTTCTTTCAATTTTCTCTTCTGGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTCATGCTTGCAATTGTTTCTTTCAATTTTCTCTTCTGGTTTTC  294

seq1  ACCTAGGTAGGGCTCACTGGAAAATATTTCTGTAGGAGTAGTGCTTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGTAGGGCTCACTGGAAAATATTTCTGTAGGAGTAGTGCTTTAGA  344

seq1  GTTTGTCATTTTTTTCTGATTAATGTAATCAACAAGAAGACATTAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCATTTTTTTCTGATTAATGTAATCAACAAGAAGACATTAAAAAC  394

seq1  ATTTATTAGATTTTTATTTATTGGAAAAATGACTTTATAAATTTCTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAGATTTTTATTTATTGGAAAAATGACTTTATAAATTTCTAATT  444

seq1  TTGAGAATTAGATTTTATCATCATAATTCTGCTTTCATCTTTACACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATTAGATTTTATCATCATAATTCTGCTTTCATCTTTACACACTT  494

seq1  CTTAAAGTACATCAAGTTATTCACTAAAATATCAGTCATGTTCCGTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTACATCAAGTTATTCACTAAAATATCAGTCATGTTCCGTTTGC  544

seq1  TTGTAGAGGTCTGTAATCATAAGAATAAAGGCTGCTTAAGTTATATGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAGGTCTGTAATCATAAGAATAAAGGCTGCTTAAGTTATATGGTA  594

seq1  AGACCCTGTCTCAGAAACATGAAAATGGGAGTTAAAGGAAATTAGAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTGTCTCAGAAACATGAAAATGGGAGTTAAAGGAAATTAGAGAAA  644

seq1  GAAATTTATAATAATCAGAATGTATACTATGCATGTATGAAGATGTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTATAATAATCAGAATGTATACTATGCATGTATGAAGATGTCAAA  694

seq1  AATCAAACTCAACAATGAAAAATGAATAGACGAATGGGAAGATAAGTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACTCAACAATGAAAAATGAATAGACGAATGGGAAGATAAGTCAG  744

seq1  TGGTAGATCACTCATCTATTATGTCTAAAGCCTTAGGTTTGACTGCCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGATCACTCATCTATTATGTCTAAAGCCTTAGGTTTGACTGCCAAG  794

seq1  ACAATAATTAAATATGGTAGAAAAAAGTCTACATATCTACATGCATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAATTAAATATGGTAGAAAAAAGTCTACATATCTACATGCATCAAA  844

seq1  TTTATGTTTTTATCACAGAAAAGCAAACCAAATCCTTTTCCTCTATAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTTTATCACAGAAAAGCAAACCAAATCCTTTTCCTCTATAGAC  894

seq1  AATTCCAGTGAATCTGGCTCCTATAACTCGGTTTCTGCACAATGCATACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAGTGAATCTGGCTCCTATAACTCGGTTTCTGCACAATGCATACT  944

seq1  TCACCTTGTTAGCTGAAAGAGAAAGCAGATCTAACATTCAGGAAGAAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTGTTAGCTGAAAGAGAAAGCAGATCTAACATTCAGGAAGAAAGA  994

seq1  AATGTATCAAAATTATTCTTCAGCAAAAATGAGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||
seq2  AATGTATCAAAATTATTCTTCAGCAAAAATGAGAATTC  1032