MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-123F04
Chromosome	4 (Build37)
Map Location	70,967,239 - 70,968,347
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cdk5rap2, Megf9, LOC100039565
Downstream gene	LOC100039979, LOC667638, EG667649, Tle1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cdk5rap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214444 MGI:2384875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Megf9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230316 MGI:1918264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039565 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039979 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 2610 ESTs, 6 Proteins

name	LOC667638 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667638
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG667649 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667649 MGI:3647299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Tle1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21885 MGI:104636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdk5rap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130243 GeneID:214444 MGI:2384875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDK5 regulatory subunit associated protein 2 transcript_id : NM_145990.3

name	Megf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803271 GeneID:230316 MGI:1918264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multiple EGF-like-domains 9 transcript_id : NM_172694.2

name	LOC100039979 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252586 GeneID:100039979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 2610 ESTs, 6 Proteins product : similar to ribosomal protein transcript_id : XM_001474183.1

name	EG667649 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94371921 GeneID:667649 MGI:3647299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG667649 transcript_id : XM_991681.1

name	Tle1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803329 GeneID:21885 MGI:104636
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin-like enhancer of split 1, homolog of Drosophila E(spl) transcript_id : NM_011599.3

name	Cdk5rap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50657347 GeneID:214444 MGI:2384875
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0042808 - neuronal Cdc2-like kinase binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007420 - brain development [Evidence ISS]; GO:0045664 - regulation of neuron differentiation [Evidence ISS] codon_start : 1 product : CDK5 regulatory subunit associated protein 2 protein_id : NP_666102.2

name	Megf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370004 CCDS:CCDS18273.1 GeneID:230316 MGI:1918264
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : EGF-like-domain, multiple 5 protein_id : NP_766282.1

name	LOC100039979 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252587 GeneID:100039979
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_001474233.1

name	EG667649 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94371922 GeneID:667649 MGI:3647299
definition	codon_start : 1 product : hypothetical protein protein_id : XP_996775.1

name	Tle1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543870 CCDS:CCDS18274.1 GeneID:21885 MGI:104636
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003714 - transcription corepressor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007222 - frizzled signaling pathway [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : transducin-like enhancer of split 1 product : transducin-like enhancer protein 1 protein_id : NP_035729.2

name	LOC100039565 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039565
definition	number : 1 pseudo : _no_value

name	LOC100039565 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039565
definition	number : 2 pseudo : _no_value

name	LOC667638 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667638
definition	number : 1 pseudo : _no_value

name	LOC667638 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667638
definition	number : 2 pseudo : _no_value

name	LOC667638 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667638
definition	number : 3 pseudo : _no_value

clone name	MSMg01-260P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204H18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-278N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512L19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-493N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075H05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-123F04.b	B6Ng01-123F04.g
ACC	DH926519	DH926520
length	1,085	1,090
definition	DH926519\|Mus musculus domesticus DNA, BAC clone: B6Ng01-123F04, 5' end.	DH926520\|Mus musculus domesticus DNA, BAC clone: B6Ng01-123F04, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg gtcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccatctcataccagctagaatgtctaagatcaaaaattcgggtgacacc agatgctggtgaatatgtgaagaaagaggaacactcctccattgttggtg gttattgcaagcttgtacaacaactcttgaaatcagtctggtggttcctc agaaaattggacatagtactactggaggatcctgaaatacctctcctggg catatatccagaagatgtcccaaccggtaagaagtacacatgctccacta tgttcatagcatccttatttgtaatagccagaagctgaaaagaacccaga tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat agggtactactcagctgtttaaaagaatgaatttatgaattcaaatggat ggacctggagggcatcatcctgagtgagataacccaatcacaagagaact ctcatgatagatactcaatgataagtggatattagcccagaaacttagaa tgcccaagttacaagatacaatttgcataacacatgaaagtcaagaagaa agaagaccaaagtttggacagtttgttccttcttagaattgagaacaaaa cacccttggaaggagttacagagacaaattttggaggtcagaggaaagaa tggaccatctagagactgccatatctggggatccatcctataatcagccc ccaaatgctgacaccactgcacacattagcaaaattttgttgaaaggatc ctgatatagctgtctcttgcgaggctatgcaggggcgagcaaacagaaaa gtggatgcttcacagtcagctattggatgatcacagagccccagtagagg agctagagaaagatcccaagagctaaaggggttgcaaccttatagtgtaa caacatttgacctaatcctacccctggagcttggttctctagtctgctat gtatcaaaaaatggctaatctggcctgttcgtgta	gaattcaggtgtttgacatacacagtcagcctgtgagcatttactgctgg ggaggcagccaactttcagcaagtgaggcagttgtcccttggatttgcat cagaggttgtaatgcgcttgcctttactcagcttcacgtgtgataacaat gaagcctgcacagagggaatgcatgtgagttaggcgctatggtcagcaca agagtcaggtaggcttcacggctaacgtagctttacattctcttttgctt ttatatgcgcccactgcctacatcccaagacttgtgtgtaacacagttta tatgtcaaaaggctgtactgctgtgcgaaaaaaattaaaagggtgtctga attctgagtgtgattaattagctgtttgggactttgcaaagcataagcgg ctgtcttcctgctctagagactaacctcaaaatggccacccacagtctgc cctacaagcgtgaaagtccatttgtttatttatttacttctttgagagtt gtttgaaatatgtgtgccagatgatcttcctgccaggacaatacacttcc attagaaatgatctctcaagcatttgctgagaatcacaagaaagaggaac gaagcaagggactagcctagattgactttaatcggaaccttacaccaggc aatgcaccctgtgacactgtacaaactgcactctgcatttcagtttgctt tatacaaagttacagtaggatggagccaaattcatcatgccttttatgtc tagggtgtgggtactcaccatgtggtagacatttagtaaaagtttactga ctcaagccaagaaaagcatttccccttttcctttcttcagtcagatttgc caggtagccaagtggctaatggtggaagccgtcttgggactaaggattta cttcaaattgggagcacagtaaccaaaatccaaaggagtggaggaaaccg agggtgaggacacagcttgtagaacttgagtctactttccctatagttat acaaagaattacccaccccattacagaacaaatgccatgtatgatttgtc tgtcgcttcgggaagaactagccttagatggtagaagctt
quality values	Open. Hide. 61 41 31 39 61 61 61 43 28 61 61 61 61 61 61 55 55 35 38 61 61 61 61 38 36 38 52 22 21 43 28 43 23 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 55 59 59 59 61 59 61 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 55 55 61 55 55 61 55 55 61 61 61 61 61 61 61 55 61 52 50 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 52 53 61 61 50 61 47 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 45 61 61 61 61 61 61 53 61 61 53 61 50 61 61 61 50 61 53 61 61 61 61 61 61 61 61 61 50 53 47 61 53 61 61 61 61 53 47 61 61 61 61 61 61 53 53 61 53 45 42 50 45 61 61 53 61 61 61 53 50 61 61 61 61 41 61 61 39 61 61 61 61 30 61 53 61 53 53 53 53 38 45 39 57 45 53 45 42 48 28 53 53 57 53 53 50 40 57 31 57 53 47 53 50 53 53 50 57 57 47 52 47 27 47 38 57 47 39 53 53 53 36 31 39 23 52 35 47 45 53 57 53 53 57 47 46 27 50 42 35 45 42 53 47 50 38 43 36 38 30 40 50 40 53 40 30 47 30 21 53 52 50 16 53 38 42 22 53 35 38 45 42 45 52 43 30 41 38 53 47 47 30 46 40 41 34 53 38 53 45 37 41 21 39 42 31 57 40 33 57 57 57 57 38 50 13 53 13 42 38 9 43 14 57 36 57 52 16 33 29 33 46 45 45 38 47 38 42 53 50 50 16 40 39 39 42 42 41 14 53 20 19 14 53 39 27 41 46 45 53 24 23 38 45 24 45 36 32 33 42 42 23 26 28 50 24 32 29 52 40 36 30 16 35 30 23 33 20 50 40 28 16 16 18 23 17 50 24 50 28 25 30 27 36 28 30 38 41 30 38 27 53 53 34 37 53 53 28 29 27 30 30 23 53 36 25 28 17 14 18 23 8 16 20 6 18 21 25 14 21 32 32 19 42 33 31 22 37 18 9 9 37 8 25 14 14 12 19 17 31 34 31 57 57 19 29 12 40 27 24 14 24 26 27 14 11 24 10 13 26 14 37 37 18 19 13 29 14 7 14 28 25 31 20 16 6 21 29 20 25 32 14 31 21 26 13 14 5 13 9 13 17 14 10 4 7 29 24 47 46 47 32 20 17 34 29 11 31 23 21 30 9 11 18 19 23 37 27 30 30 19 24 13 13 28 16 11 12 10 37 15 16 18 11 8 8 19 28 29 25 9 5 6 6 7 23 28 15 11 7 13 19 10 8 16 8 20 16 13 28 16 15 9 29 20 9 5 8 14 23 5 7 11 24 29 18 17 9 5 24 21 39 43 7 9 29 29 26 14 13 21 31 27 13 33 34 20 10 11 14 15 6 8 7 10 18 7 10 7 16 10 7 12 36 22 24 13 27 9 12 8 20 16 11 18 11 7 8 15 6 6 10 5 8 14 14 7 8 15 5 15 6 16 6 8	Open. Hide. 55 61 55 39 50 35 24 16 28 29 49 41 37 55 55 55 52 52 61 55 61 55 61 49 59 59 59 59 59 59 61 61 61 59 61 61 59 59 59 61 59 61 59 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 59 61 61 61 52 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 59 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 61 61 61 59 61 59 59 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 52 61 55 55 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 52 61 61 61 61 61 47 48 61 61 61 61 53 57 57 57 57 50 57 47 53 57 53 53 57 57 57 57 57 53 53 50 47 42 40 53 52 57 57 53 53 50 53 50 57 53 53 57 57 57 57 57 53 57 53 53 43 53 57 53 47 43 57 52 53 53 50 53 57 57 53 57 38 53 53 53 53 57 57 57 38 57 50 35 57 53 57 50 45 50 52 52 53 42 53 47 57 57 53 57 57 53 24 52 42 34 53 45 47 38 53 38 57 53 47 45 53 52 50 52 37 30 33 57 57 33 57 50 43 53 57 43 41 33 53 47 47 52 53 50 53 34 38 30 52 53 45 36 53 57 38 41 39 47 53 50 42 50 30 37 52 40 57 37 40 27 50 53 29 38 53 40 40 39 37 53 38 24 38 38 46 38 52 42 39 35 24 32 26 39 57 37 44 40 40 53 41 52 39 53 35 36 42 48 48 33 52 35 21 25 57 41 34 38 31 40 57 22 42 26 41 57 40 37 28 42 48 31 57 52 29 30 29 32 47 28 29 29 29 13 53 30 17 40 45 35 26 33 53 29 57 53 31 33 40 33 39 43 29 30 40 25 48 38 57 57 37 37 30 39 27 32 28 28 24 46 30 21 36 24 51 51 45 27 28 34 36 38 23 34 40 27 36 48 40 48 30 26 44 20 32 22 29 30 51 47 28 23 39 31 44 29 30 22 27 36 28 23 13 11 25 29 31 29 28 24 31 29 33 33 17 30 27 43 45 45 23 10 34 26 38 48 29 29 51 43 29 14 51 46 15 16 24 26 43 26 28 25 29 29 8 13 13 28 28 10 32 15 51 41 21 23 29 27 28 31 20 35 25 32 29 12 26 15 22 20 26 21 29 25 23 20 31 43 22 23 29 26 25 13 17 27 10 7 7 9 36 26 41 36 29 28 23 15 22 39 14 39 9 28 19 15 28 21 26 21 8 30 24 18 14 17 24 24 17 10 29 10 27 10 20 29 21 25 27 28 22 51 46 23 30 27 27 28 46 16 6 12 19 9 6 24 14 31 9 21 28 31 33 11 16 12 12 6 31 35 17 29 23 8 30 19 10 23 22 15 19 29 35 23 28 8 8 6 8 6 9 19 23 30 33 14 29 21 8 15 20 19 39 19 15 32 14 6 6 8 7 12 9 5 4 8 7 34 14 18 17 5 15 30 6 9 21 11 35 12 6 13 44 35 22 6 5 5 6 5 15 8 15 13 15 6 22 30 26 25 15 17 18 10 29 5 11 9 28 19 25 28 18 9 4 4 5 18 12 10 6 9 10 26 13 14 42 17 11 4 2 9 24 6 5 6 12 7 7 23 19 3 3 10 12 24 24 5 4 7 24 26 10 16 27 20

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_70967239_70968347
seq2: B6Ng01-123F04.g_67_1156 (reverse)

seq1  AAGCTTCTACCATCTAAAAGCCTTAGTTCTGTCCCCGAAGCGACCAGACC  50
      |||||||||||||||  ||| | ||||||  | |||||||||| |||| |
seq2  AAGCTTCTACCATCT--AAGGC-TAGTTC--TTCCCGAAGCGA-CAGA-C  43

seq1  AAATCATACCATGGCATTTGTTCTTGTATTGGGGGTTGGGTTATTCTTTT  100
      |||||||| |||||||||||||| |||| |||||  ||||| ||||||| 
seq2  AAATCATA-CATGGCATTTGTTC-TGTAATGGGG--TGGGTAATTCTTT-  88

seq1  GGTATGATACTATAGGGAAAGTAGAACTCAAGTTCTACAAGCTGTTGTCC  150
       ||||   |||||||||||||||| ||||||||||||||||||| |||||
seq2  -GTAT--AACTATAGGGAAAGTAG-ACTCAAGTTCTACAAGCTG-TGTCC  133

seq1  TCACCCTCGGTTTTCCTCCACTCCTTTTGGATTTTGGTTACTGGTGCTCC  200
      |||||||||| ||||||||||||| ||||||||||||||||| |||||||
seq2  TCACCCTCGG-TTTCCTCCACTCC-TTTGGATTTTGGTTACT-GTGCTCC  180

seq1  CAATTTGAAGTAATTCC-TAGTCCCAAGACGGCTTCCACCATTAGCCACT  249
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  CAATTTGAAGTAAATCCTTAGTCCCAAGACGGCTTCCACCATTAGCCACT  230

seq1  TGGCTACCTGGCAAATCTGACTGAAGAAAGGAAAAGGGGAAATGCTTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACCTGGCAAATCTGACTGAAGAAAGGAAAAGGGGAAATGCTTTTC  280

seq1  TTGGCTTGAGTCAGTAAACTTTTACTAAATGTCTACCACATGGTGAGTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTGAGTCAGTAAACTTTTACTAAATGTCTACCACATGGTGAGTAC  330

seq1  CCACACCCTAGACATAAAAGGCATGATGAATTTGGCTCCATCCTACTGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCTAGACATAAAAGGCATGATGAATTTGGCTCCATCCTACTGTA  380

seq1  ACTTTGTATAAAGCAAACTGAAATGCAGAGTGCAGTTTGTACAGTGTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTATAAAGCAAACTGAAATGCAGAGTGCAGTTTGTACAGTGTCAC  430

seq1  AGGGTGCATTGCCTGGTGTAAGGTTCCGATTAAAGTCAATCTAGGCTAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCATTGCCTGGTGTAAGGTTCCGATTAAAGTCAATCTAGGCTAGT  480

seq1  CCCTTGCTTCGTTCCTCTTTCTTGTGATTCTCAGCAAATGCTTGAGAGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCTTCGTTCCTCTTTCTTGTGATTCTCAGCAAATGCTTGAGAGAT  530

seq1  CATTTCTAATGGAAGTGTATTGTCCTGGCAGGAAGATCATCTGGCACACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTAATGGAAGTGTATTGTCCTGGCAGGAAGATCATCTGGCACACA  580

seq1  TATTTCAAACAACTCTCAAAGAAGTAAATAAATAAACAAATGGACTTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAAACAACTCTCAAAGAAGTAAATAAATAAACAAATGGACTTTCA  630

seq1  CGCTTGTAGGGCAGACTGTGGGTGGCCATTTTGAGGTTAGTCTCTAGAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGTAGGGCAGACTGTGGGTGGCCATTTTGAGGTTAGTCTCTAGAGC  680

seq1  AGGAAGACAGCCGCTTATGCTTTGCAAAGTCCCAAACAGCTAATTAATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACAGCCGCTTATGCTTTGCAAAGTCCCAAACAGCTAATTAATCA  730

seq1  CACTCAGAATTCAGACACCCTTTTAATTTTTTTCGCACAGCAGTACAGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAATTCAGACACCCTTTTAATTTTTTTCGCACAGCAGTACAGCC  780

seq1  TTTTGACATATAAACTGTGTTACACACAAGTCTTGGGATGTAGGCAGTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATATAAACTGTGTTACACACAAGTCTTGGGATGTAGGCAGTGG  830

seq1  GCGCATATAAAAGCAAAAGAGAATGTAAAGCTACGTTAGCCGTGAAGCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCATATAAAAGCAAAAGAGAATGTAAAGCTACGTTAGCCGTGAAGCCT  880

seq1  ACCTGACTCTTGTGCTGACCATAGCGCCTAACTCACATGCATTCCCTCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACTCTTGTGCTGACCATAGCGCCTAACTCACATGCATTCCCTCTG  930

seq1  TGCAGGCTTCATTGTTATCACACGTGAAGCTGAGTAAAGGCAAGCGCATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCTTCATTGTTATCACACGTGAAGCTGAGTAAAGGCAAGCGCATT  980

seq1  ACAACCTCTGATGCAAATCCAAGGGACAACTGCCTCACTTGCTGAAAGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTCTGATGCAAATCCAAGGGACAACTGCCTCACTTGCTGAAAGTT  1030

seq1  GGCTGCCTCCCCAGCAGTAAATGCTCACAGGCTGACTGTGTATGTCAAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTCCCCAGCAGTAAATGCTCACAGGCTGACTGTGTATGTCAAAC  1080

seq1  ACCTGAATTC  1109
      ||||||||||
seq2  ACCTGAATTC  1090

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information