BAC Information

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BAC

Clone NameB6Ng01-125F08
Chromosome4 (Build37)
Map Location 29,199,201 - 29,200,076
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040735, LOC230044, LOC665141, LOC100040773, Epha7, LOC100040907, LOC100040811
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125F08.bB6Ng01-125F08.g
ACCDH928001DH928002
length1,0701,197
definitionDH928001|Mus musculus domesticus DNA, BAC clone: B6Ng01-125F08, 5' end.DH928002|Mus musculus domesticus DNA, BAC clone: B6Ng01-125F08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggataaggatccactggatctggaatcataagtgtttgaatta
tctgaggtagatgctgggaattcatctctggtcctttgtaagagtaacat
atgctctttggctgggttggctgtctcctcaaagtcagtagaggacacac
tcagacatcaaattttcagcacaaaggagatttgttactgcagagggaca
gaggcaaacgggagggggtggctgcctttggactgaacaaagccagacag
gaaatagcagacagcagcagacagcagcagacagcaggagaaagcagcag
aaagcagacagcagacagcagacagcagacagcagacagcagacagcaga
cagcagacagcagacagcagacaggagacagcaacagagtatgtctcccc
acccccaacccagctaggcgtgggcttttaaggatgaataggtagagtct
gtgctacagtgagttagtaagccctgattggatatatcagccaaatgaaa
tttttttcattgttataccttggtgttttgtctcagatatgagtcagtgg
ccaaataagggaatgaaccttagaggttagctttagaaatgtaatctaaa
ggtgagcaagagagagagaagggtaaaggacaaaacatgtatgtgccatg
tttgtccaggcctgaattttccacgcgtaggtctgccagagcccttcatt
ctcatgtttctatttaattattgttttgttgaatgttggataggtgaaca
ccattttctctggttactccctgttaatattaaggagtcattgttaggga
ctcaaggaatcagaatgttggtcaaagtcaggtacaacaggctgtctcca
tggtaaagtttggggctaggagaagcactgaaacattttgtgaggtgccc
atctgtggctagccactttggagctgtctagcattcagatgctggagggg
acatctggaacttgtgaactgctagagccatctttagttgattgaatctg
ctgcgacgatagaatagggaacagatggagtttaggagaattaatagctt
ggagtatacatttcaacttt
gaattctttgaaacaaaatttaaagccttgtaatatgcttcatcttgaaa
agtgaactctgaagcccaaggttactagttcagaattcaaaattgctcct
tatctggagcagaaacaggatgacaataaaaatgacaatctgttatataa
atggatcttatatcatctcattataggaacagaattaaggcggagctaat
gctaggtaaaagtattcacacagagaaaccttatatctgtgacaaaaatt
aatatgatccgcttgatcaatctttgatacacacacacacacacacacac
acacacacacacacacacacacacatataattacttaatgaattggagca
aagattttatttttttttattttttttaacattttatttggttataattt
atttttttttccattttttattaggtatttagctcatttacatttccaat
gatatactaaaagtcccccatacccacccagccccactcccctacccacc
cactccccctttttggccctggcgttcccctgtactgggacatacaaagt
ttatgtgtccaatgggcctctctttccagtgatggccgattaggccatct
tttgttacatatgcagctagagtcaagagatccggggtactggttagttc
ataatgttgttccacctatagggttgcagatccctttagctccttgggtt
ctttctctagctcctccattgggagccctgtgatccatccattagctgac
tgtgagcatccacttctgtgtttgctaggccccggcatagtctcacaaga
gacagctacatctgggtcctttcaataaatctttgctagggtatgcaatg
gtgtcagcgtttggatgctgattatggggtggatccctggatatggcagt
ctctacatggtccatcctttcatctcagctccaaactttgtctctgtaac
tccttccatgggtgttttgttcccattctagaggggcatagtgtcgacac
tcagtcttcattcttctttgagttcatgtgttagcaattgtactataatc
ttggggaatccatggtttggggctaattccacttatcaggtgagtacata
ttggtgtattcttatgatgggtaaccctcactcagagtgtgtctccaggc
accatgccgtagggaattcataatcatcctttttattgccggtaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_29199201_29200076
seq2: B6Ng01-125F08.b_249_1118

seq1  GAGGCAAACGGGAGGGGGTGGCTGCCTTTGGACTGAACAAAGCCAGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAACGGGAGGGGGTGGCTGCCTTTGGACTGAACAAAGCCAGACAG  50

seq1  GAAATAGCAGACAGCAGCAGACAGCAGCAGACAGCAGGAGAAAGCAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCAGACAGCAGCAGACAGCAGCAGACAGCAGGAGAAAGCAGCAG  100

seq1  AAAGCAGACAGCAGACAGCAGACAGCAGACAGCAGACAGCAGACAGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGACAGCAGACAGCAGACAGCAGACAGCAGACAGCAGACAGCAGA  150

seq1  CAGCAGACAGCAGACAGCAGACAGGAGACAGCAACAGAGTATGTCTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACAGCAGACAGCAGACAGGAGACAGCAACAGAGTATGTCTCCCC  200

seq1  ACCCCCAACCCAGCTAGGCGTGGGCTTTTAAGGATGAATAGGTAGAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAACCCAGCTAGGCGTGGGCTTTTAAGGATGAATAGGTAGAGTCT  250

seq1  GTGCTACAGTGAGTTAGTAAGCCCTGATTGGATATATCAGCCAAATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACAGTGAGTTAGTAAGCCCTGATTGGATATATCAGCCAAATGAAA  300

seq1  TTTTTTTCATTGTTATACCTTGGTGTTTTGTCTCAGATATGAGTCAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCATTGTTATACCTTGGTGTTTTGTCTCAGATATGAGTCAGTGG  350

seq1  CCAAATAAGGGAATGAACCTTAGAGGTTAGCTTTAGAAATGTAATCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAGGGAATGAACCTTAGAGGTTAGCTTTAGAAATGTAATCTAAA  400

seq1  GGTGAGCAAGAGAGAGAGAAGGGTAAAGGACAAAACATGTATGTGCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCAAGAGAGAGAGAAGGGTAAAGGACAAAACATGTATGTGCCATG  450

seq1  TTTGTCCAGGCCTGAATTTTCCACGCGTAGGTCTGCCAGAGCCCTTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCAGGCCTGAATTTTCCACGCGTAGGTCTGCCAGAGCCCTTCATT  500

seq1  CTCATGTTTCTATTTAATTATTGTTTTGTTGAATGTTGGATAGGTGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTTCTATTTAATTATTGTTTTGTTGAATGTTGGATAGGTGAACA  550

seq1  CCATTTTCTCTGGTTACTCCCTGTTAATATTAAGGAGTCATTGTTAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCTCTGGTTACTCCCTGTTAATATTAAGGAGTCATTGTTAGGGA  600

seq1  CTCAAGGAATCAGAATGTTGGTCAAAGTCAGGTACAACAGGCTGTCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGAATCAGAATGTTGGTCAAAGTCAGGTACAACAGGCTGTCTCCA  650

seq1  TGGTAAAGTTTGGGGCTAGGAGAAGCACTGAAACATTTTGTGAGGTTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGTAAAGTTTGGGGCTAGGAGAAGCACTGAAACATTTTGTGAGG-TGCC  699

seq1  CATCTGTGGCTAGCCACTTTGGAGCTGTCTAGCATTCAGATGCTGAGGGG  750
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  CATCTGTGGCTAGCCACTTTGGAGCTGTCTAGCATTCAGATGCTGGAGGG  749

seq1  AACATCTGGAACTTGTGAACTGCTAGAGCCATCTTTAGTTGATTTGAAAT  800
       |||||||||||||||||||||||||||||||||||||||||||   |||
seq2  GACATCTGGAACTTGTGAACTGCTAGAGCCATCTTTAGTTGATT--GAAT  797

seq1  CTGCTGCGACAGATAGAATAGGG-ACAGAAGGAGTTTAAGGGAGAAATAT  849
      |||||||||| |||||||||||| ||||| ||||||||  |||||| || 
seq2  CTGCTGCGAC-GATAGAATAGGGAACAGATGGAGTTTA--GGAGAATTA-  843

seq1  ATAGCTT-GAGTATACATTTAAAACTTT  876
      ||||||| ||||||||||||  ||||||
seq2  ATAGCTTGGAGTATACATTT-CAACTTT  870