BAC Information

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BAC

Clone NameB6Ng01-125G01
Chromosome4 (Build37)
Map Location 16,658,763 - 16,739,665
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125G01.bB6Ng01-125G01.g
ACCDH928029DH928030
length1,176568
definitionDH928029|Mus musculus domesticus DNA, BAC clone: B6Ng01-125G01, 5' end.DH928030|Mus musculus domesticus DNA, BAC clone: B6Ng01-125G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,738,482 - 16,739,665)(16,658,763 - 16,659,336)
sequence
gaattccacaaaagacaaagattatctaacaaacctgtcccttccagatg
ttagatggtgcacaatgacagtgaaggaactttcaaaaatatatagatta
ttggcatagactttggttgcccctgaaacttgaaggtgaatatcctttta
ctaaagaaaacatttacttcagacataggatatttttaaatattcaaccc
tataacatactaaaaaatcaaatcaatatatacccttgtaaacaaaacaa
gaacatggagatgtcttttttttaatgatgatctgaaagatagtttatta
attactgaatattaacaaaactttaaattatttgatttttggtgtagtgt
gtgaaatatttttaaaggagagaggactgagattatttgctcagggattg
aaacttttgttttggatgacagatcatgactcattgaataaggtataagg
caggagagtgaagaaggataatactcaacattatgtttaagtctacacac
acacacacacacacacacacacacacacacacttgaaaatgtaaagtgaa
caaagtaagatcactccagaaaaccacaatcagcatgatgccaagttgta
gagttcagtcccaaaggatacatctataaaacattcctacacatacctaa
ggttcaaggaacattgcataagaggctgcataagaaacctgtgaaacacc
caaatgtctaagattttatcacaaacttgatacagaagtgcagaataatt
caaatagaagaactatattaagtatcaataataacagtaacaataaccaa
acactgaacaatattttatatccatgagactataataaatatattattga
ttactcctcagaaaagaaaacttagtaatttcagtttctaattaggtaat
taagcttagagagtttaaataaattcccacaaattacagctactaagagt
taaaactagttacaaatctaaaattatatcacttaagaatagtacgtaca
tcttaaccacatgtctagatttatgttttgaaagatcattcgacagtggt
gaggaagaattcattgagagacattccaagatagagccattccatgcatc
ctttaaccgtacgccaagaattacgccaactagaatcgaaggatgcaaaa
catgtcttaccagagaaggcaccaat
agtgttgttcagaatgtgataagagcataggaaatataagtttactggag
ggcataaggtactattaaagtgaatatttgtgtctgtcatctcttttcaa
ttctatcactttgactatttttacataattataaagtgttttataaaaat
tcttaaccatatttcatatataaaatattaaataggacattaaataatca
tttacattttatttcattactcttttttgatgactaagaatgttaaaaga
cagaatactttctgaacatgatgaatattggtgggtgagtggatagtaat
atttaggtacaaggatatttgttttgtgcatgtttttaggtatcatgtca
ttgtttccatgattttgctcttactaaaaattgttttaaaattcaagccc
taatgagttactaaaaagtagatagtgggccctataggaatttcaaccca
ggtaattgcaaggttattagttgctctccaaaacctgtaagttaggccat
attgctgaaggcaatacttagacagctcaatgaacaaagctgaattgagt
tgatatctacatagagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16738482_16739665
seq2: B6Ng01-125G01.b_46_1221 (reverse)

seq1  ATTGGTGTGCTTTTCTCTGGGTAAGGCCATGTTTTTCATTCCCTCGATTC  50
      |||||||     |||||| ||||| | |||||||| || ||| |||||||
seq2  ATTGGTG---CCTTCTCT-GGTAA-GACATGTTTTGCA-TCCTTCGATTC  44

seq1  CTTAGTTGCCTGTAATTCTTTGCGTACGGTT-AAGGGTGCATGG-ATTGC  98
        |||||| | ||||||||| |||||||||| |||| ||||||| || ||
seq2  --TAGTTGGC-GTAATTCTTGGCGTACGGTTAAAGGATGCATGGAATGGC  91

seq1  TCTATCCTTTGGTATGTCTCTCAATGAATTC-TCCTCACAACTGTCGAAT  147
      ||||||  |||| |||||||||||||||||| ||||||| ||||||||| 
seq2  TCTATC--TTGGAATGTCTCTCAATGAATTCTTCCTCACCACTGTCGAA-  138

seq1  TGATCTTTCAAAAACATAAATCTAGACATGTGGTTAAGATGTACGTACCT  197
      ||||||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  TGATCTTTC-AAAACATAAATCTAGACATGTGGTTAAGATGTACGTA-CT  186

seq1  ATTCTTAAGTGATATAATTTTAGATTTGTAACTAGTTTTAACTCTTAGTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAGTGATATAATTTTAGATTTGTAACTAGTTTTAACTCTTAGTA  236

seq1  GCTGTAATTTGT-GGAATTTATTTAAACTCTCTAAGCCTAATTACCTAAT  296
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  GCTGTAATTTGTGGGAATTTATTTAAACTCTCTAAGCTTAATTACCTAAT  286

seq1  TAGAAACTGAAATTACTAAGTTTTC-TTTCTGAGGAGTAATCAATAATAT  345
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGAAACTGAAATTACTAAGTTTTCTTTTCTGAGGAGTAATCAATAATAT  336

seq1  ATTTATTATAGTCTCATGGATAT-AAATATTGTTCAGTGTTTGGTTATTG  394
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTTATTATAGTCTCATGGATATAAAATATTGTTCAGTGTTTGGTTATTG  386

seq1  TTACTGTTATTATTGATACTTAATATAGTTCTTCTATTTGAATTATTCTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTATTATTGATACTTAATATAGTTCTTCTATTTGAATTATTCTG  436

seq1  CACTTCTGTATCAAGTTTGTGATAAAATCTTAGACATTTGGGTGTTTCAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTATCAAGTTTGTGATAAAATCTTAGACATTTGGGTGTTTCAC  486

seq1  AGGTTTCTTATGCAGCCTCTTATGCAATGTTCCTTGAACCTTAGGTATGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTTATGCAGCCTCTTATGCAATGTTCCTTGAACCTTAGGTATGT  536

seq1  GTAGGAATGTTTTATAGATGTATCCTTTGGGACTGAACTCTACAACTTGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAATGTTTTATAGATGTATCCTTTGGGACTGAACTCTACAACTTGG  586

seq1  CATCATGCTGATTGTGGTTTTCTGGAGTGATCTTACTTTGTTCACTTTAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGCTGATTGTGGTTTTCTGGAGTGATCTTACTTTGTTCACTTTAC  636

seq1  ATTTTCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAC  686

seq1  TTAAACATAATGTTGAGTATTATCCTTCTTCACTCTCCTGCCTTATACCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATAATGTTGAGTATTATCCTTCTTCACTCTCCTGCCTTATACCT  736

seq1  TATTCAATGAGTCATGATCTGTCATCCAAAACAAAAGTTTCAATCCCTGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAATGAGTCATGATCTGTCATCCAAAACAAAAGTTTCAATCCCTGA  786

seq1  GCAAATAATCTCAGTCCTCTCTCCTTTAAAAATATTTCACACACTACACC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAATCTCAGTCCTCTCTCCTTTAAAAATATTTCACACACTACACC  836

seq1  AAAAATCAAATAATTTAAAGTTTTGTTAATATTCAGTAATTAATAAACTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAATAATTTAAAGTTTTGTTAATATTCAGTAATTAATAAACTA  886

seq1  TCTTTCAGATCATCATTAAAAAAAAGACATCTCCATGTTCTTGTTTTGTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGATCATCATTAAAAAAAAGACATCTCCATGTTCTTGTTTTGTT  936

seq1  TACAAGGGTATATATTGATTTGATTTTTTAGTATGTTATAGGGTTGAATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGGTATATATTGATTTGATTTTTTAGTATGTTATAGGGTTGAATA  986

seq1  TTTAAAAATATCCTATGTCTGAAGTAAATGTTTTCTTTAGTAAAAGGATA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATATCCTATGTCTGAAGTAAATGTTTTCTTTAGTAAAAGGATA  1036

seq1  TTCACCTTCAAGTTTCAGGGGCAACCAAAGTCTATGCCAATAATCTATAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTTCAAGTTTCAGGGGCAACCAAAGTCTATGCCAATAATCTATAT  1086

seq1  ATTTTTGAAAGTTCCTTCACTGTCATTGTGCACCATCTAACATCTGGAAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAAAGTTCCTTCACTGTCATTGTGCACCATCTAACATCTGGAAG  1136

seq1  GGACAGGTTTGTTAGATAATCTTTGTCTTTTGTGGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTTTGTTAGATAATCTTTGTCTTTTGTGGAATTC  1176

seq1: chr4_16658763_16659336
seq2: B6Ng01-125G01.g_66_639

seq1  GAATTCAGTGTTGTTCAGAATGTGATAAGAGCATAGGAAATATAAGTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTGTTCAGAATGTGATAAGAGCATAGGAAATATAAGTTTA  50

seq1  CTGGAGGGCATAAGGTACTATTAAAGTGAATATTTGTGTCTGTCATCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGCATAAGGTACTATTAAAGTGAATATTTGTGTCTGTCATCTCT  100

seq1  TTTCAATTCTATCACTTTGACTATTTTTACATAATTATAAAGTGTTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTCTATCACTTTGACTATTTTTACATAATTATAAAGTGTTTTAT  150

seq1  AAAAATTCTTAACCATATTTCATATATAAAATATTAAATAGGACATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCTTAACCATATTTCATATATAAAATATTAAATAGGACATTAAA  200

seq1  TAATCATTTACATTTTATTTCATTACTCTTTTTTGATGACTAAGAATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATTTACATTTTATTTCATTACTCTTTTTTGATGACTAAGAATGTT  250

seq1  AAAAGACAGAATACTTTCTGAACATGATGAATATTGGTGGGTGAGTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAGAATACTTTCTGAACATGATGAATATTGGTGGGTGAGTGGAT  300

seq1  AGTAATATTTAGGTACAAGGATATTTGTTTTGTGCATGTTTTTAGGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATTTAGGTACAAGGATATTTGTTTTGTGCATGTTTTTAGGTATC  350

seq1  ATGTCATTGTTTCCATGATTTTGCTCTTACTAAAAATTGTTTTAAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTGTTTCCATGATTTTGCTCTTACTAAAAATTGTTTTAAAATTC  400

seq1  AAGCCCTAATGAGTTACTAAAAAGTAGATAGTGGGCCCTATAGGAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTAATGAGTTACTAAAAAGTAGATAGTGGGCCCTATAGGAATTTC  450

seq1  AACCCAGGTAATTGCAAGGTTATTAGTTGCTCTCCAAAACCTGAAAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACCCAGGTAATTGCAAGGTTATTAGTTGCTCTCCAAAACCTGTAAGTTA  500

seq1  GGCCATATTGCTGAAGGCAATACTTAGACAGCTCAATGAACAAAGCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATATTGCTGAAGGCAATACTTAGACAGCTCAATGAACAAAGCTGAA  550

seq1  TTGAGTTGATATCTACATAGAGCT  574
      ||||||||||||||||||||||||
seq2  TTGAGTTGATATCTACATAGAGCT  574