BAC Information

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BAC

Clone NameB6Ng01-126G14
Chromosome4 (Build37)
Map Location 59,090,310 - 59,091,362
singlet/doubletsinglet
Overlap geneAI481877
Upstream geneSvep1, Musk, Edg2, LOC675306, LOC433711, Olfr267, AI314180, LOC100041581, Ltb4dh, 2010203O07Rik, Gng10
Downstream geneLOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126G14.bB6Ng01-126G14.g
ACCDH928788DH928789
length1,2651,051
definitionDH928788|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G14, 5' end.DH928789|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgcttactcttgcctcagctattggcctttcagctccttattt
aaccaatcagaacgtgagagagggagtgtttacaaaacactgagacaggt
gatacttaacaataacaaagtctggcctgtaatcagatctttgctgaatc
agaaatcagcatttatataatacataggcaatctttacacggtgcataaa
acatcactccaacatctccaccttttagtccaataaaagtcaatttctaa
aatatcaataaactatatacagcaagaacaattatgaaaactgtcaggta
agaactacattgacaatgtctagtccatttgtatttggcaactgcagtgg
tttgaatatgttcggctcataggatgtggcacttttaggaagtgtggcct
tattggaagaggggagccttgaaagaatgtcactgtgaaggtggagcttt
gaggtctcatatatgtgttcaagcctagccagtgtgatccagagcctcct
tctgtctgccttcagatcaagatctattaactcgcagctccttctgtagc
accatgtttgcctgaacactgccaagcttcccaccatgatgataatggac
tgaacctctgaaacggtaatctattcccaattaaatgttgtcctttttaa
gagccttggtcagtgtctcttcacagcaaggaaaccctgactatgacagc
aaccttggagagagtactctaagatctattctgtcttggtgagtccaggc
tctctaccttttctatcatagcctacatttatcaacctacaaatatcctt
ttaggctttaaaacatgttcttaaatcctaaacaatttaattgtgagact
aaagctatctagtcctcaaccctgtcagagacctgagaaaataaatgtta
cctgaataaacaggaagtgcagagcaagcagcctccaaaaccacaaaaat
gacatgggttggtggctacctggacagtcgccaagagtcctctgaaatgt
cagagcatccatttttcagtcttctggcgcagtacaccaggacaaactta
ctgtgagcagatcttgaaggacttgcctactttgtcttagcaagtttggc
agtcagcttctctcggtgtcctgcttgtgttcagcttggacagcattctg
tcagtattggaagacaggcagttcttgcccagtgtctagcctgcccaatt
ggaccactccaatgggagatcttcaagtgccgaaatctctttgagaagta
acaacggggggtcgt
gaattccttcattgcctggcaactgaacttctagtattaagaaaaagaga
tgtggggctggagagatggctcagtggttaagagtgctagccactcttcc
agagaacctgggttcaattcccagcacctatatggctgctcaaaacagta
actccagttgcaggggatgtgacaccctcacacagacatacttacaggca
aaacaccaatgcacatgaaataaaaataaataattttttaaaaagaaaac
gtgtattttttatttaaaacaaaagagaagcctcaaatatcttgtgttct
aacatttctccttacaaaaaggcttgggaagaatttagggctaaataaat
gctgcctcaaacaggcaagataaaacataaatcattgcataaaaacatct
cccaagtctatctgctttctgaaccaactgggagatgaaagcaggagtct
catttaagaaggcctgtcctgttctgcattatatagccatcatcagaagc
aattcatttggggatcaaatagactgacagaaaggacaagcagggaatta
ccactgtcagcagctcaaagccaggactgcttcccagtgctggcactgat
attgggtctagtcagtgctctgtctattattcttctctcctctgccagct
actgtgcatcatgactactaaaaaaggaactgaattaatctagtcaaaac
aaaataaaattacttatatattttccacactctcatagtatatatatata
tatatatatatatatatatatatatatatatcaaactgggggattgaatt
tacactagagcataaagcagtatatttaagcgttctatcactaaacatca
tccacaacccagaaaacttctctataaggagatgggaacatcattcatgg
cacaggacaccttttgtaatttttgtacaaaatgtaaattacttaacttt
caatatgctataaataagctacttaagaagacatactggagaatgaaact
gctaattgagttgactagattccaagtcattgccaaattatccgggtgat
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_59090310_59091362
seq2: B6Ng01-126G14.g_69_1119 (reverse)

seq1  TATCACACAGATAATTCTGCAATGACTTTGAAATCTAGTTCAACTCAATT  50
      |||||| | |||||||  |||||||| ||| ||||||| |||||||||||
seq2  TATCACCCGGATAATTTGGCAATGAC-TTGGAATCTAG-TCAACTCAATT  48

seq1  ATGCAGTTTCATCCTTCAGTATGTCTTCTTAAGTAAGCTTATTTATAGCA  100
      | |||||||||| || |||||||||||||||||| |||||||||||||||
seq2  A-GCAGTTTCATTCTCCAGTATGTCTTCTTAAGT-AGCTTATTTATAGCA  96

seq1  TA-TGAAAGTTAAGTAATTTACATTTTGTAC-AAAATTACAAAAGGTGTC  148
      || |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATTGAAAGTTAAGTAATTTACATTTTGTACAAAAATTACAAAAGGTGTC  146

seq1  CTGTGCCATGAATGATGTTCCCATCTCCTTAATGAGAAAGTTTTCTGGGT  198
      |||||||||||||||||||||||||||||||  ||| |||||||||||||
seq2  CTGTGCCATGAATGATGTTCCCATCTCCTTATAGAG-AAGTTTTCTGGGT  195

seq1  TGTGGATGATGTTTAGTGATAGAACGCTTAAATATACTGCTTTATGCTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATGATGTTTAGTGATAGAACGCTTAAATATACTGCTTTATGCTCT  245

seq1  AGTGTAAATTCAAT-CCCCAGTTTGATATATATATATATATATATATATA  297
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTGTAAATTCAATCCCCCAGTTTGATATATATATATATATATATATATA  295

seq1  TATATATATATATATATACTATGAGAGTGTGGAAAATATATAAGTAATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATACTATGAGAGTGTGGAAAATATATAAGTAATTT  345

seq1  TATTTTGTTTTGACTAGATTAATTCAGTTCCTTTTTTAGTAGTCATGATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTTTGACTAGATTAATTCAGTTCCTTTTTTAGTAGTCATGATG  395

seq1  CACAGTAGCTGGCAGAGGAGAGAAGAATAATAGACAGAGCACTGACTAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAGCTGGCAGAGGAGAGAAGAATAATAGACAGAGCACTGACTAGA  445

seq1  CCCAATATCAGTGCCAGCACTGGGAAGCAGTCCTGGCTTTGAGCTGCTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATATCAGTGCCAGCACTGGGAAGCAGTCCTGGCTTTGAGCTGCTGA  495

seq1  CAGTGGTAATTCCCTGCTTGTCCTTTCTGTCAGTCTATTTGATCCCCAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTAATTCCCTGCTTGTCCTTTCTGTCAGTCTATTTGATCCCCAAA  545

seq1  TGAATTGCTTCTGATGATGGCTATATAATGCAGAACAGGACAGGCCTTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCTTCTGATGATGGCTATATAATGCAGAACAGGACAGGCCTTCT  595

seq1  TAAATGAGACTCCTGCTTTCATCTCCCAGTTGGTTCAGAAAGCAGATAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGACTCCTGCTTTCATCTCCCAGTTGGTTCAGAAAGCAGATAGA  645

seq1  CTTGGGAGATGTTTTTATGCAATGATTTATGTTTTATCTTGCCTGTTTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGATGTTTTTATGCAATGATTTATGTTTTATCTTGCCTGTTTGA  695

seq1  GGCAGCATTTATTTAGCCCTAAATTCTTCCCAAGCCTTTTTGTAAGGAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCATTTATTTAGCCCTAAATTCTTCCCAAGCCTTTTTGTAAGGAGA  745

seq1  AATGTTAGAACACAAGATATTTGAGGCTTCTCTTTTGTTTTAAATAAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAGAACACAAGATATTTGAGGCTTCTCTTTTGTTTTAAATAAAAA  795

seq1  ATACACGTTTTCTTTTTAAAAAATTATTTATTTTTATTTCATGTGCATTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACGTTTTCTTTTTAAAAAATTATTTATTTTTATTTCATGTGCATTG  845

seq1  GTGTTTTGCCTGTAAGTATGTCTGTGTGAGGGTGTCACATCCCCTGCAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGCCTGTAAGTATGTCTGTGTGAGGGTGTCACATCCCCTGCAAC  895

seq1  TGGAGTTACTGTTTTGAGCAGCCATATAGGTGCTGGGAATTGAACCCAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTACTGTTTTGAGCAGCCATATAGGTGCTGGGAATTGAACCCAGG  945

seq1  TTCTCTGGAAGAGTGGCTAGCACTCTTAACCACTGAGCCATCTCTCCAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGAAGAGTGGCTAGCACTCTTAACCACTGAGCCATCTCTCCAGC  995

seq1  CCCACATCTCTTTTTCTTAATACTAGAAGTTCAGTTGCCAGGCAATGAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATCTCTTTTTCTTAATACTAGAAGTTCAGTTGCCAGGCAATGAAG  1045

seq1  GAATTC  1053
      ||||||
seq2  GAATTC  1051