BAC Information

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BAC

Clone NameB6Ng01-127L03
Chromosome4 (Build37)
Map Location 18,669,355 - 18,670,360
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127L03.bB6Ng01-127L03.g
ACCDH929744DH929745
length1,230987
definitionDH929744|Mus musculus domesticus DNA, BAC clone: B6Ng01-127L03, 5' end.DH929745|Mus musculus domesticus DNA, BAC clone: B6Ng01-127L03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaggcagtctttccaagtagagtaagacaagagaagtcaattt
gaatggcaaggactttgagccagaacagctgagttgaaccagttatacag
agttcagaaagagatagaaatattgagtttccttagcattaagtctcaga
ggctaaaataaaacctgctaggcctaggttagtagattgaggttggaatc
taaagccttcatggctggggggtccagaagactagattgtatggaggcaa
gaatctttctggcttaggctgaggctctgagctcagcccaaaccatgtat
ttttaaatatttggtatgcctcccatctcatcttttcatgtgaggaaata
aaagcaatattttcatttccacatattaaatttattgtttcttttattta
ttcaatttttgtaaagaattttattgaaattttgatggggatgaaacttt
agattgcttttggtagtatggtcattttcacaattttgatcctaccaatc
agtgaacatggtagatctcttcgtcttctgatattttctatatcttttta
cagttttgtacggttttcaatgtactttacttccttagatttattcatga
tttttaaaagactatatttaatgctattatttatttccttgtgggtgtgt
atgtcatttctaggatgtttactcttttgatgagagtatttataagctgt
aagatttttcttatgggctcttaagaatatatatatatatatatatatag
tgtctaaaatcacatctccaaagaacaaccctttgctatttctatccagt
ttatatctctcatttgtcttattgttgtagctaaaatggtgagtactatt
ttgaacaagagtggacagactggatatctttgcagtctttctgattttgt
ggaaatactatgagaatttctctagttaggaggattaagatgatcttagc
tctggatatattgtatatttgccttaatatgtagggaaaagtcttcagga
ttcattcatgatgaatgttggatttattagagatcatttttgcatgcagt
aagtgatcatgtgctctgtctagagtaattctttcaatattgcattgccg
aattcatttgtactttgaattgagcaggaagtaagctacttgttggggga
acttcgagtacctgatcaattcagattatggaaagtgactcacaaaacat
taactattgagaggttttctgtctcttcat
gaattctttgttttgctctttatcccatttttaaatagggttatttggtt
ttctggaatccaacttcttgagttctttatatatattggatactagtccc
ctatcagatttaggattggtaaagatcttttcccaatttattggttactg
tttttccttattgacagtgtcctttgccttacaatttgctttgcaatttt
atgagatcctatgtgtcgatacttgatcttacagcacaagccgttggtgt
tctgttcaggaatttttccccctgtgcccagattatcaaggcttttcccc
actttctcctctataactttcagtgtttctggttttaaatggcattcctt
gatccacttagacttgagctttgtacactattaaactttttaaagattgt
ttaattgaaatgtttattaaacatgtaaaactttcctaccagtaaaatag
acgggtaaactatttaacgaaaatatattggcaacatttatcactcacaa
acataactcttgcacatccacaaattttctcaacaaaaatatttgcatgc
acaatacattctttttatagttaagggtcaaaaatgcaataaaaggaata
ttaaaattctgaaccaagtgtataacttttacttttagcaacttctaaat
aaaatacacatatattattattaaaatctactattattacaatttattat
tacaatttattatgcacacatatgcaaacacacacttctattccactgac
caatgtatttgttttttataccaattccatgctgtttttaatacaataac
tctgtttcattgttcatgattgcatttgcatcctgttttatttccatgag
ttttgaaattactttagtagatttgtgaagatactttgagaaaatatttg
caggacatgagaaactgttagaccacaacttctagcactattgctctctg
ccagactatacaatcaccatggatgatgatgataaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18669355_18670360
seq2: B6Ng01-127L03.g_68_1054

seq1  GAATTCTTTGTTTTGCTCTTTATCCCATTTTTAAATAGGGTTATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTTGCTCTTTATCCCATTTTTAAATAGGGTTATTTGGTT  50

seq1  TTCTGGAATCCAACTTCTTGAGTTCTTTATATATATTGGATACTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAATCCAACTTCTTGAGTTCTTTATATATATTGGATACTAGTCCC  100

seq1  CTATCAGATTTAGGATTGGTAAAGATCTTTTCCCAATTTATTGGTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGATTTAGGATTGGTAAAGATCTTTTCCCAATTTATTGGTTACTG  150

seq1  TTTTTCCTTATTGACAGTGTCCTTTGCCTTACAATTTGCTTTGCAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTTATTGACAGTGTCCTTTGCCTTACAATTTGCTTTGCAATTTT  200

seq1  ATGAGATCCTATGTGTCGATACTTGATCTTACAGCACAAGCCGTTGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATCCTATGTGTCGATACTTGATCTTACAGCACAAGCCGTTGGTGT  250

seq1  TCTGTTCAGGAATTTTTCCCCCTGTGCCCAGATTATCAAGGCTTTTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGGAATTTTTCCCCCTGTGCCCAGATTATCAAGGCTTTTCCCC  300

seq1  ACTTTCTCCTCTATAACTTTCAGTGTTTCTGGTTTTAAATGGCATTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCCTCTATAACTTTCAGTGTTTCTGGTTTTAAATGGCATTCCTT  350

seq1  GATCCACTTAGACTTGAGCTTTGTACACTATTAAACTTTTTAAAGATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCACTTAGACTTGAGCTTTGTACACTATTAAACTTTTTAAAGATTGT  400

seq1  TTAATTGAAATGTTTATTAAACATGTAAAACTTTCCTACCAGTAAAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAAATGTTTATTAAACATGTAAAACTTTCCTACCAGTAAAATAG  450

seq1  ACGGGTAAACTATTTAACGAAAATATATTGGCAACATTTATCACTCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGTAAACTATTTAACGAAAATATATTGGCAACATTTATCACTCACAA  500

seq1  ACATAACTCTTGCACATCCACAAATTTTCTCAACAAAAATATTTGCATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACTCTTGCACATCCACAAATTTTCTCAACAAAAATATTTGCATGC  550

seq1  ACAATACATTCTTTTTATAGTTAAGGGTCAAAAATGCAATAAAAGGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACATTCTTTTTATAGTTAAGGGTCAAAAATGCAATAAAAGGAATA  600

seq1  TTAAAATTCTGAACCAAGTGTATAACTTTTACTTTTAGCAACTTCTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTCTGAACCAAGTGTATAACTTTTACTTTTAGCAACTTCTAAAT  650

seq1  AAAATACACATATATTATTATTAAAATCTACTATTATTACAATTTATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACACATATATTATTATTAAAATCTACTATTATTACAATTTATTAT  700

seq1  TACAATTTATTATGCACACATATGCAAACACACACTTCTATTCCACTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTATTATGCACACATATGCAAACACACACTTCTATTCCACTGAC  750

seq1  CAATGTATTTG-TTTTTATACCAATTCCATGCTGTTTTTAATACAATAAC  799
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAATGTATTTGTTTTTTATACCAATTCCATGCTGTTTTTAATACAATAAC  800

seq1  TCTGTTTCATTGTTCATGATTGCATTTGCATTCCTGTTTTATTTCCATTG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||  
seq2  TCTGTTTCATTGTTCATGATTGCATTTGCA-TCCTGTTTTATTTCCAT--  847

seq1  GAGTTTTGAAATTACTTTTAGTAGAATTTGTGAAGAATTACTTTGGAGAA  899
      ||||||||||||||| |||||||| |||||||||||  |||||| |||||
seq2  GAGTTTTGAAATTAC-TTTAGTAG-ATTTGTGAAGA--TACTTT-GAGAA  892

seq1  AATATTTGCAGGACATGAGAAAACTGTTAGACACACAAACTTCTAGCAAC  949
      ||||||||||||||||||| |||||||||||| ||| |||||||||| ||
seq2  AATATTTGCAGGACATGAG-AAACTGTTAGAC-CAC-AACTTCTAGC-AC  938

seq1  TATTGCTCTCTGCACAGACCTATACCAAATCAACCCATGGATGAATGGAT  999
      ||||||||||||| |||| ||||||  |||||  ||||||||||   |||
seq2  TATTGCTCTCTGC-CAGA-CTATAC--AATCA--CCATGGATGA--TGAT  980

seq1  GATAAAT  1006
      |||||||
seq2  GATAAAT  987