BAC Information

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BAC

Clone NameB6Ng01-128N23
Chromosome4 (Build37)
Map Location 14,302,089 - 14,303,121
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039988, Runx1t1, LOC625831, LOC433687, LOC100040030
Downstream geneLOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128N23.bB6Ng01-128N23.g
ACCDH930609DH930610
length1,2051,034
definitionDH930609|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N23, 5' end.DH930610|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttttttatatgcattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttatggacagcgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtccattctcgatcttacagcacaagtcattgctgttt
tattcaggaatttttcccctgtgcccatctcttcgaggcttttccccact
ttctcctctataagtttcactgtctctgattttatgtggagtcccttgat
ccacttagatttgaccttagtacaaggaagtaggaatggatccattcaca
ttcttctacatgttaaccaccagttgtatcagcaccaattgttgaaaatg
ctgtcttttttttccactggatggttttagctccctcgtcaaagatcgag
taatcataggtgtgtgggttcatttcagggtcttcagttctattcccttg
gtctacttgtctgtcgctataccagtaccatgcagtttttatcacaattg
cgctgtatacagctttaggtcaggcatggtgattccaccagagattcttt
tatccttgagaagagtttttgctatcctagcttttttgttatttcagatg
aatttgcagattgctctttctaattcgttgaaaaagtgagttggaatttt
gatggggatagcattgaatctgtagattgcttttggcaagatagccattt
ttacaaagttgatcctgccaatccatgagcatgggagatctttccacctt
cagagatcttctttaattctttcttcagagacttgaagttcttatcatac
agatctttcacttccttagttagagtcatgccaagtattttatataattt
gtgactatatgaaggtgttgtccctaatttctttctcagctgtttatcct
ttgtgtagagaaggccattgacttgttgagtaatttatatccagctactc
actgaagcgttatcagtaaggagtcttctggggaatttaagtgcattata
atacatatcatatactcgcaaagggagagttgggcctctcgttccaattg
atcctggaccttcagcgtggaatgctctgacaaaccatcagaatctcatg
cgatg
gaattctataggctgcatgtttttagtttaaaggagagatagaatgaatc
gcagtctctaaggagtatgacatttatttaagactttctaggtgggaaga
aaacatgcccttggttttcaaatcctgaacaagggacaattaaacagttg
tgagcctagtcccatcatcagcaagcccagcactgaaagttttgctgaat
gtgtcaagtttgagtatgctccaggctcattctgataggcactatcacat
tttgttcacacagcgccacatgttcacactgacttatctaaaatccatgc
actttaacgctttggccggctctccctgaggatcacacatgcttcattca
taggctgaatgctccatatgtgtcttacgggagttcagtgtaagtactag
ctaaactgtcgcccctgcactgaaagctctgacattccatatcatccttg
gtcctgctttggctaaccttagacatttgttttctactgttggagcagga
acccgagaaaagttagaatgacagcagggtatcggcagataccacttggc
atccttaattcatccaaatcatgctacagttttgaatttaaaatgttggt
ttcctgtgggttattttttcccttcttctttcctggcacaatgctctttg
aatggcaaacagtaggcttggggatagaaaaagaaaattatcagaaacct
tatatgactttggtaatatagccaacagctaggcaattatgaatacaaaa
ttaataattgtttttgtggtctgatatctcaagtactagagaaatgttca
gacctctttctcagaacaaatgggtaactgccctttcaccaatatttata
tattaggtaagactttcaattcagaaaactaaaggcactggctaattgac
aacacaattgttgattaaatggtcatttggtcaccaaaaaaaatataaga
taatggttatctgtatgacttccacatctaggcagaggcaaattggaaaa
taattgtagatgtattgcaagcataaaatatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_14302089_14303121
seq2: B6Ng01-128N23.g_69_1102 (reverse)

seq1  TGCATATTTTATGCTTTGCAATACATTCTTACATTTATTTTCCAATTTGC  50
      |||||||||||||| |||||||||||   |||| ||||||||||||||||
seq2  TGCATATTTTATGC-TTGCAATACAT--CTACAATTATTTTCCAATTTGC  47

seq1  TTCTGCCTATGGTTGT-GAAGTCATACAGAT-ACCATTATC-TATA-TTT  96
       ||||||||  | ||| |||||||||||||| ||||||||| |||| |||
seq2  CTCTGCCTA--GATGTGGAAGTCATACAGATAACCATTATCTTATATTTT  95

seq1  TTATGGTGGCAAAATGACCATTTAATCAAACAAATGTTGTTGTC-ATTAG  145
      || ||||| | |||||||||||||||| ||||| || ||||||| |||||
seq2  TTTTGGTGACCAAATGACCATTTAATC-AACAATTG-TGTTGTCAATTAG  143

seq1  CCAGTGCC-TTAGTTTTCTGAATTGAAAGTCTTACTTAATATATAAATAT  194
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  CCAGTGCCTTTAGTTTTCTGAATTGAAAGTCTTACCTAATATATAAATAT  193

seq1  TGGTGAAAGGGCAGTTACCCATTTGTTCTGAGAAAGAGGTCTGAACATTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAGGGCAGTTACCCATTTGTTCTGAGAAAGAGGTCTGAACATTT  243

seq1  CTCTAGTACTTGAGATATCAGACCACAAAAACAATTATTAATTTTGTATT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTACTTGAGATATCAGACCACAAAAACAATTATTAATTTTGTATT  293

seq1  CATAATTGCCTAGCTGTTGGCTATATTACCAAAGTCATATAAGGTTTCTG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTGCCTAGCTGTTGGCTATATTACCAAAGTCATATAAGGTTTCTG  343

seq1  ATAATTTTCTTTTTCTATCCCCAAGCCTACTGTTTGCCATTCAAAGAGCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTCTTTTTCTATCCCCAAGCCTACTGTTTGCCATTCAAAGAGCA  393

seq1  TTGTGCCAGG-AAGAAGAAGGGAAAAAATAACCCACAGGAAACCAACA-T  442
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  TTGTGCCAGGAAAGAAGAAGGGAAAAAATAACCCACAGGAAACCAACATT  443

seq1  TTAAATTCAAAACTGTAGCATGATTTGGATGAATTAAGGATGCCAAGTGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCAAAACTGTAGCATGATTTGGATGAATTAAGGATGCCAAGTGG  493

seq1  TATCTGCCGATACCCTGCTGTCATTCTAACTTTTCTCGGGTTCCTGCTCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCCGATACCCTGCTGTCATTCTAACTTTTCTCGGGTTCCTGCTCC  543

seq1  AACAGTAGAAAACAAATGTCTAAGGTTAGCCAAAGCAGGACCAAGGATGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAGAAAACAAATGTCTAAGGTTAGCCAAAGCAGGACCAAGGATGA  593

seq1  TATGGAATGTCAGAGCTTTCAGTGCAGGGGCGACAGTTTAGCTAGTACTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAATGTCAGAGCTTTCAGTGCAGGGGCGACAGTTTAGCTAGTACTT  643

seq1  ACACTGAACTCCCGTAAGACACATATGGAGCATTCAGCCTATGAATGAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAACTCCCGTAAGACACATATGGAGCATTCAGCCTATGAATGAAG  693

seq1  CATGTGTGATCCTCAGGGAGAGCCGGCCAAAGCGTTAAAGTGCATGGATT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGATCCTCAGGGAGAGCCGGCCAAAGCGTTAAAGTGCATGGATT  743

seq1  TTAGATAAGTCAGTGTGAACATGTGGCGCTGTGTGAACAAAATGTGATAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAAGTCAGTGTGAACATGTGGCGCTGTGTGAACAAAATGTGATAG  793

seq1  TGCCTATCAGAATGAGCCTGGAGCATACTCAAACTTGACACATTCAGCAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATCAGAATGAGCCTGGAGCATACTCAAACTTGACACATTCAGCAA  843

seq1  AACTTTCAGTGCTGGGCTTGCTGATGATGGGACTAGGCTCACAACTGTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCAGTGCTGGGCTTGCTGATGATGGGACTAGGCTCACAACTGTTT  893

seq1  AATTGTCCCTTGTTCAGGATTTGAAAACCAAGGGCATGTTTTCTTCCCAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCCCTTGTTCAGGATTTGAAAACCAAGGGCATGTTTTCTTCCCAC  943

seq1  CTAGAAAGTCTTAAATAAATGTCATACTCCTTAGAGACTGCGATTCATTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAGTCTTAAATAAATGTCATACTCCTTAGAGACTGCGATTCATTC  993

seq1  TATCTCTCCTTTAAACTAAAAACATGCAGCCTATAGAATTC  1033
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCCTTTAAACTAAAAACATGCAGCCTATAGAATTC  1034