BAC Information

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BAC

Clone NameB6Ng01-137K24
Chromosome4 (Build37)
Map Location 145,589,751 - 145,590,849
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084
Downstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137K24.bB6Ng01-137K24.g
ACCDH937141DH937142
length1,0891,140
definitionDH937141|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K24, 5' end.DH937142|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaaagagatggagttccagttgatcttgtcttttccactgtgt
tacatcaagaaagttgctagccaaagtggtttcataaaaatacccaaaga
atgctggccactgacaacaaaaggggttgcttttcacaaactgacaataa
gtcttcattgctaaacacagggcatacacaaaacactgtataaaaaaagg
tcaaactggtgccaagaacattgactcttatgttccagtgtcctccttat
ggaaggtgctttgaaaggtacacaaagtgaaatatatacacagaaccaac
caaaaagacgttgatctataatttttccttccagcaaaatatgcttaggg
caatgatgtcatgaatttactgggaataaccaatcaatgtctaatttgac
ttaaataccaaaagcactctggttaaatgttatatatctatatacacaag
tgtgtgtggacatgagtatactgagagtgtttgtggacacaccagtgtta
taaatagttaaaaaggtttctatatagtgtaaagcataaaactttcattg
gagcagtctcccagctatcatttagatttaagacaattcaagcctatgac
ctcatacatagatacctcttaacctctctcctgctccgttctcatctatc
tgttctcttctctgtctcccactaaatctcctacatctgcattctcctct
ctacatcttttttaatatccagaaattcggccctccaattcttgtcccag
gaattggatgttatattttttcttagaagcaatcaggtgtgggacatcac
cagaacttctctggattgcctcaaggcatagagagctgcttgccattcaa
gtatctcagcaggggtgggaggagtatttacaaatgtaaagctggtgatg
ggccatagaaatgacatatcaagatcctgctagcacttagttctctgcca
ataaagtttgaaaatacagacacacccactgaaaaggttagaaatcacct
caataatgtgagaatccagcagccagaagaggcattgggcccacagtgat
gtcactttgatgtaaactagtctgacctcaatgagagaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatgatcacagggctccaac
gagagctagagaagtacccaaggagctaaagggatctgcacccttatagt
gaatcacatatgactatcagtaccccgagctctgactctagctgctatgt
atcaaagatgcttagtcggcatcactggaaagaagccattgacactcaac
ttaattgtccgaaacggacgtccaggtccaaaagggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145589751_145590849
seq2: B6Ng01-137K24.b_47_1135

seq1  GAATTCTGAAAGAGATGGAGTTCCAGTTGATCTTGTCTTTTCCACTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAAGAGATGGAGTTCCAGTTGATCTTGTCTTTTCCACTGTGT  50

seq1  TACATCAAGAAAGTTGCTAGCCAAAGTGGTTTCATAAAAATATCCAAAGA  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACATCAAGAAAGTTGCTAGCCAAAGTGGTTTCATAAAAATACCCAAAGA  100

seq1  CTGCTGGCCACTGACAACAAAAGGGGTTGCTTTTAACAAACTGACAATAA  150
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGCTGGCCACTGACAACAAAAGGGGTTGCTTTTCACAAACTGACAATAA  150

seq1  GTCTTCATTGCTAAAGACAGGGCTGACACAAAACACTGTATATGAAAAGG  200
      ||||||||||||||| |||||||  |||||||||||||||||  ||||||
seq2  GTCTTCATTGCTAAACACAGGGCATACACAAAACACTGTATAAAAAAAGG  200

seq1  GCAAACTGGTGCCTGCAAGAACATTGACTCTTATGTTCCAGTGTCCTCCT  250
       |||||||||||   |||||||||||||||||||||||||||||||||||
seq2  TCAAACTGGTGC---CAAGAACATTGACTCTTATGTTCCAGTGTCCTCCT  247

seq1  TATGGAAGGTGCTTTGAAAGGTACACAAAGTGAAATATATACACAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGGTGCTTTGAAAGGTACACAAAGTGAAATATATACACAGAACC  297

seq1  AACCAAAAAGACGTTGATCTATAATTTTTCCTTTCAGCAAAATATGCTTA  350
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AACCAAAAAGACGTTGATCTATAATTTTTCCTTCCAGCAAAATATGCTTA  347

seq1  GGGCAATGATGTCATGAATTTACTGGGAATAACCAATCAATGTCTAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGATGTCATGAATTTACTGGGAATAACCAATCAATGTCTAATTT  397

seq1  GACTTAAATACCAAAAGCACTCTGGTTAAATGTAATATATCTATACACAC  450
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GACTTAAATACCAAAAGCACTCTGGTTAAATGTTATATATCTATATACAC  447

seq1  AAGGGTGCTTGGTCATGAGTGTACTGGGAGTGTTTGTGGACACACCAGTG  500
      ||| |||  ||| ||||||| ||||| |||||||||||||||||||||||
seq2  AAGTGTGTGTGGACATGAGTATACTGAGAGTGTTTGTGGACACACCAGTG  497

seq1  TTATAAGTA-ATGAAAAGGTTTCTATATACTATAAAGCATAAAACTTTCA  549
      |||||| ||  | |||||||||||||||| | ||||||||||||||||||
seq2  TTATAAATAGTTAAAAAGGTTTCTATATAGTGTAAAGCATAAAACTTTCA  547

seq1  TTGGAGCAGTCTCCCAGCTATCATTTAGATTTAAGACAATTCAAGCCTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAGTCTCCCAGCTATCATTTAGATTTAAGACAATTCAAGCCTAT  597

seq1  GACCTCATACATAGATACCTCTTAACCTCTCTCCCGCTCCGTTCTCATCT  649
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GACCTCATACATAGATACCTCTTAACCTCTCTCCTGCTCCGTTCTCATCT  647

seq1  ATCTGTTATCTTCTCTGTCTCCCACTAAATCTCCTACATCTGCATTCTCC  699
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCTCTTCTCTGTCTCCCACTAAATCTCCTACATCTGCATTCTCC  697

seq1  TCTCTACATCTCTTTTAATATCCAGAAATTCGGCCCTCCAATTCTTGTCC  749
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACATCTTTTTTAATATCCAGAAATTCGGCCCTCCAATTCTTGTCC  747

seq1  CAGGAATTGGATGTCAGGTTTTTTTCTTAGAAGCAATCAGGTGTGAAACA  799
      |||||||||||||| |   ||||||||||||||||||||||||||  |||
seq2  CAGGAATTGGATGTTA-TATTTTTTCTTAGAAGCAATCAGGTGTGGGACA  796

seq1  TCACCAGAACTTCTCTGGATTGCCTTTAGGTATAGAGAGCTGCTTGCCAT  849
      |||||||||||||||||||||||||  ||| |||||||||||||||||||
seq2  TCACCAGAACTTCTCTGGATTGCCTCAAGGCATAGAGAGCTGCTTGCCAT  846

seq1  TCAAGTATCTCAGCAGGGGTGGGAGGAGTATTTACAAATGTAAAGCTGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTATCTCAGCAGGGGTGGGAGGAGTATTTACAAATGTAAAGCTGGT  896

seq1  GATGGGCCATAGAAATGACAATATCAAGATCCTGC-------TAGTTCTC  942
      ||||||||||||||||||| |||||||||||||||       ||||||||
seq2  GATGGGCCATAGAAATGAC-ATATCAAGATCCTGCTAGCACTTAGTTCTC  945

seq1  TGCCAATAAAAATTTGAAAATACAGACACACCCACTGAAAAGGTTAGGAA  992
      ||||||| ||| |||||||||||||||||||||||||||||||||||  |
seq2  TGCCAAT-AAAGTTTGAAAATACAGACACACCCACTGAAAAGGTTAG--A  992

seq1  ATTCACCTCCATACATGTGGAGAATCCAAGTAGGCCAGAAGAGGAAATTG  1042
      | ||||||| ||| |||| |||||||| || | ||||||||||| |  | 
seq2  AATCACCTCAATA-ATGT-GAGAATCC-AGCA-GCCAGAAGAGGCA--TT  1036

seq1  GGGCCCACAGGTTGGAATGTCACTTTGATGTAGACTAGTCTGACCTTAAA  1092
      ||||||||||  ||  |||||||||||||||| |||||||||||| | ||
seq2  GGGCCCACAG--TG--ATGTCACTTTGATGTAAACTAGTCTGACC-TCAA  1081

seq1  TGA-AGAA  1099
      ||| ||||
seq2  TGAGAGAA  1089